LOC110537469 (LOC106567749)


Basic Information

Item Value
gene id LOC110537469
gene name LOC106567749
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 32504245 ~ 32534686 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623530.2
TCATATTTCGCTCGCTTCGTTATTAAAATCTGAATACCAAATTATAGCGTAAACATTTCCCCTATGTAATCATATTAGGTCATACATGTGGCTATTATTCTATTGTTCGAACAATTTTCCTCTATTCTGTTGACGATTGTTAAATATACCAAGTCTAAAGGGGTTTAATCAAGCGGAATACATTTGAAAAGGCTAATATAGAGCTCGAATAATGATGATCCTAGATCATACATCGACATaaaattgtttatttatttcaaaAGTGTGTAATGTATTATATATGCAGAACGATTTGCATTTAATCTgtattgatataataacacaCCCGCTGATGTATAAGTAGTTCGTTCCGAAAATGTGGGGGGTTTCCCCTCCACTGAAAGTAATGTGCTGTTCTGCGAGCTACCATCAACAACACTTTACTGCCCTACAGGCGCTCAAGGACTGAGGTAAAGGGAAACCAAATACCCGCGAATTCCCCTGAAGATTTGACAAAGGATTACAAGTATGGACAAAGCGGAGCAGTTTGTCAACATCGACCTAAACGACGACAACATCTGCGGTGTCTGCAAGCTGGAGACCGACACGGGGACCATGTCCTTCTGCCATGTCTGCTTTGAGCTCAGCATCGAAGGTGTGTCCCATGCGACCCTCCTGCACTCCAAATCCCTACGGGGTCACCGGGAGTGTTTTGAGAAGTACCACCTCATCGCCAACCAGAAGCTGTCCCGCTCCAAGGTCTCCCGCAGTGCCTACGAGGGAATGAAGCTAGCCCTGAGCCAGAAGATCAGCCGTATTGTTCAGTACGCCCAGAACAAAGACTCTGTCAGCTTAGAGGGAGGTCCGGGCCGCCGGGGGGGCAAGCACCAGCTCCTTTGCTACAGCCAGAATGGAGAACGTACACTTCTTCCTCAGTCAGACGCCCAAGTGCCTCGCTATACCCCATGCTGGAACCAGGGGACGGGGGCAGGAGGGCTGCCGGACTACGCCACAGGCATGCTGGAGTGCCACTCGGCCGAGGGGCTGGGGCTACTGGAGGACGGGCAGGGCCTGGGGGGCCTGTGGGGGTCCACAGGGAGGAGGGGTCTTCATAGCCACAGCCAGTGTTCTGGAGGAGACCACCAGCTGCTGCACTCAAACAATGGCCACAGCAGAGACGAGTTGATTAAAATGAGTGTGGATGAACTCCACCAGCTGAATGGCCAGCTCCTGCTACAGATTCAAAAGGTGTTTGAGGAGCTGACGGTGGCTGTACAGGAGAAAGACTCGCTGGCGTCGGAGCTGCACGTTCGTCATATCGCTATCGAGCAGCTCTTCAAGAACTGTGCCAAGCTTCCCTGGCTGCAGATCAGCCGAGCCGGGTCCGGGGTCAAGGCCAGCAGCAATGCCCCCGTGGAGTGAGGGGAGTCTGGGGGTACCTACCTGGCTTGGCTGCCTCTCTCAGGGGGCTGGCTGGCTCACTCCCAGGGCTACAGACACAGGCTGGCCTCTAGCCAGTGCCCTTTGTATTGTGAAAGACTTGCTGCGTGGTGTGGTTTGTCGCAGATGAGTGAGAAATGGACTTGGCCTCCTCTCATCATGCTTAAGGCTTTCTGACTGCAGTACTTGAATAAAGGGCTTGAGGAAAGGCAATAAAATTGAAGGACCTTGGGAACCATCTACTTCCAAATGGAAACTGTGGGTTTTTGATCCCCTCTGTTGGTGGACCTGTTGCCTATGCAGATAAAGTATTTTTGAAAGAATGTCTATTCAAATGCATTTCATTCAGTGACGTGAGCAAGATCTTGTTTGCATATCTAGCTAAAGTTGTTTTCGTTTCACCAACATTAAATTTTTTGGTTTTCATCTTTTACATTTAGCCTTCTTTTGTTATTTTCATTACACCATTTCCTTCGCTCCTCAGCAAATATTTTGTTGACTTATTCTGCAGCTGTGGTAACTGTTTCTAAATGACGAGTGAGATTTTATTTTGTAATCTGTGCAGTGAAACCCACTCCTGAGGTTTGAAGATTCTGTTACATCACCCACAATCTAGTTCTAAGTGGAGGTGGGATTTTAGCCGTTTTGGATTAGGGTTGAATTGATATTTTTTTGGTTTTGTATTTTCATTTTTTGTTAGTGGCATGCTGCAAATGCTATTTTCTGATAGTCTTAACTTAagttctctctcttttcaactGGTAAGGTATTTTATGGCTGTCGAGCACAAGTCATGCCTGTAGTTGAACAAGGGAGTGACATGAAATACATGCTGAAAGCAGAGAAGGCCCGACTCTAAGCGTTATATGGTCCAATCGCCAAACCAAAGTATTTTATTTGCTTCAAGGCAGCAAATGTCagtatttattattttacttGTGGCCTACAAGTATAGGCCTCGCTAGACCAACTAGAATTGATAGTGAAATGCAATAGAATACACTGATACCAAATTCACCTGAAATGTGGCTCAATGACAAATGTGTGATTCTATAACATAGGTTTAGCTGTAATGTCCTCTGTTATGAACCGTTCAACACTTCTCCCCTGGTTTCATGGtctgttatgttgtgttatgaatgTATGCAATCAATTATTTTAATATTGTTTTTCTCTTCTGGTTTTGGGTTTCAAATGTGATTTGGTTTgtacttattttatttataattttAGCCAATTATTTTCTGGGGGTAGGCCTATGCCTTGTGGAGTTCAAATTTATGGATATGTGAACTCAAACTAGACTGCCGAGTCCTGTTTTATCTTAACAGGATGTGTCCAACAATTACCCTTGCCTCCTGCTTTAAGGGCACTGATTGGAAGGAACCAATATAGCTGAAAGAACCCAAATAATGATTTGTTTCACCTATCCAGCCTGGTCAGATCGGTGattttgagagagaaaaaaagtgacAAACAAGTGAACTATTCATGAACATTTGGGTAACAGCTGTAGTAAGAACATGATTTATTTATGTTTAGACACCCTCAAGTGGTGGTTTAAAATTACTGCAGAGGTTCTTACCACTGAAGTGGAGCCTCTTGGGATAGTTCTATAATTGGCCCAACATGAATTTGTATGTTTTGGGAAGAAAGAAACACTTATAATCAGGTTGTGATGTATTTGAACCTCCCAATGTCAGTCACCCTCTTTATAAGAGATAAGATTTGACCCCTTTGGGGTTTACACAAAAGGTTTTTAGCTCTGCTTTGTCTCATCCTGGTTTTGTTTGGATTAATAGGTGTGTTCTTCTGAGCATGAGTTACTGATTTCTAGatacacttaaaataagggctgtttcTTGTAGACTTCCCCtggtgtgacattttgataaccaggTAAATCTCTCAGACAAGGTTacttatcaatatattcggctctatttactctgaATCGAAAATGCTAATTTGCGTCAAAGTagacatgcaaaactacaaatccctgcaagctcctgcacgtcatctcaaGCTGACACGTTTGCTAACATGTATTGTCAGTTTAAAACTTGCtcgacagttcacagaattgtcgatttttaaagaaatgtagccaatttattaattactatatttagctaacattagatacttaatccagagattcttacctttgcctcgattctgcAGTCTCACCAAGATCATGCCATTTGTAGTTCTtcatgatagccacattagcagctaatttaGCATTTCGTTTTTGGGAGGTAAATACAGGTGAATATATTGTTAAAAGTTGCCTTGTcttagagagatttacatggttataaAAACATCACACCAAGGTAAGCCTGCATGAAACAACCCTTATTTTTAGTGTTTCTAAAAATCCACTACGGGGAAAAATTAATGGTAGAAGAACAATATgaaacatttccctgtttgactgcttgtcttcatgggtattatgactcatactgtggtactctatagtGTACTTATACCAGGGGatggggtgccatttcagatttgTCCACTGAGTGGTTTGTAGGTTTTGTAAAAGTATATGTCTGAACGGTTGCTTCCCTGGTTGGAAAGACCTGTGAGCCACCTGTGTCTGTCTGGGGTAAATGTCCATtagctgtgtgtgtatctggaaatgtatacatacataccCGTTACATTGCTTTCCCCTTTCTGCTAAATTTGACTTGACTCATTATTTACTTGGTCTGATatacattaaagggatagttataccaaattacaaaatgacattgCTTTCCTTACCCAGTAaagtatgacagcaatccatgtttTGTTTTTACTTCCCTGTCACTGTTTCCCGCATTTGGCATATTAGTTTTTTTGCGCATCATTTCGATAGTATCTCAAATGTAACTTTTAtagatgatttgaacatgatgTGCAAAAAATGCTAAAGTCAGTACCaggacttgaatgggatttgtgccacaaatgcagGTGCCAGGAAAACTTAACCGAAGCATGGATTGTTGTCATACATTGTCCAGTATgccatttgggtgaactatcctaCATATAGTAATGTGTGAACTATGCCTGTGCTGTGTGGGTTTCTTTGTAGAAAATGTTTATTTGTGGAGCTGACTGCCTATATGAATTGTCtaaattgttttgtattttttccaaaatatttcaataaaatatttttcataca

Function

NR:

description
protein EURL homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623530.2 True 4618 mRNA 0.42 5 32504245 32534686

Neighbor

gene id symbol gene type direction distance location
LOC110537467 LOC106567956 coding upstream 32874 32458471 ~ 32471371 (+)
prdm15 LOC106567952 coding upstream 49432 32438318 ~ 32454813 (+)
LOC110537465 LOC106567954 coding upstream 66164 32416457 ~ 32438081 (+)
LOC110537463 LOC106567953 coding upstream 94090 32404315 ~ 32410155 (+)
LOC110537461 LOC106567950 coding upstream 121372 32351752 ~ 32382873 (+)
btg3 btg3 coding downstream 12232 32546918 ~ 32554656 (+)
cxadr LOC106567957 coding downstream 20370 32555056 ~ 32614990 (+)
LOC110537474 NA coding downstream 967248 33501934 ~ 33513654 (+)
rnft1 LOC106567963 coding downstream 1064253 33598939 ~ 33624023 (+)
ptrh2 ptrh2 coding downstream 1248128 33782814 ~ 33784617 (+)
G1060718 NA non-coding upstream 183037 32304204 ~ 32321208 (+)
G1060602 NA non-coding upstream 423899 32061000 ~ 32080346 (+)
G1060555 NA non-coding upstream 524640 31979194 ~ 31979605 (+)
LOC110537456 LOC105010978 non-coding upstream 536789 31961376 ~ 31968942 (+)
G1060911 NA non-coding downstream 78564 32613250 ~ 32614551 (+)
G1060932 LOC106567958 non-coding downstream 125006 32659692 ~ 32660196 (+)
G1060957 NA non-coding downstream 163310 32697996 ~ 32699061 (+)
G1060990 NA non-coding downstream 227878 32762564 ~ 32762805 (+)
G1060993 NA non-coding downstream 231128 32765814 ~ 32766072 (+)
G1060470 NA other upstream 692898 31811062 ~ 31811347 (+)
G1059685 LOC106567926 other upstream 1294888 31207629 ~ 31209357 (+)
G1059091 NA other upstream 1497179 31000227 ~ 31007066 (+)
LOC110537434 NA other upstream 1625134 30848508 ~ 30879117 (+)
G1058787 LOC106567901 other upstream 1987355 30516081 ~ 30516890 (+)
G1062404 NA other downstream 825048 33359734 ~ 33366249 (+)
G1062537 NA other downstream 973633 33508319 ~ 33508863 (+)
G1062648 NA other downstream 1123592 33658278 ~ 33661949 (+)
ubb ubb other downstream 2232338 34766968 ~ 34770882 (+)
LOC110537506 LOC106567992 other downstream 2441606 34964222 ~ 34982028 (+)

Expression


Co-expression Network