LOC118937664


Basic Information

Item Value
gene id LOC118937664
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 33358447 ~ 33392252 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034950.1
GAAATTCTATTATTGCAGTGTAGGGAAGGGCATGGTAAAATGAAAACAGGACAGCCAGACAAGCCTGTGTATGAGTCAAACGGATTTGCATATGAATGGAGTGGAAATTAGTTGACTTCGTGATCTGTAAGCAACCAAAAACAGAGTGGCAGATTCTGGAGTTGCTGTGGAGAAACTTTGAAAAGAAACGATGGAGCTGGAGTCCTACATGGAGGTGATGTGAGGGCTTCCAGCCCCAGGTCGGCACAAACTGTCCCATTGGCAGCCTGCATCCATCTGGCTGGTGGGGTTAGATCCAGACCCGCCTCTACCTTTGGAGCTATCTGCACTGTATGGAGCATGGCCAAGCATTGGATTCAGAGgCCTGTTGGCATGCTGAGCTGAACTAACTGGTCATTGATATTCATATCTGGTTTCTGCTGGACCAAGGTGATGATGTCCTGCTTAACGACCCCAACATTATAATCAGGTCCTACTCACTGTATGGTTCCAGACCGAACGGTTGCCTTGGCAACAACCAGTCTACCCACACAACGTTGTATCACTGTGGAACATTTATGACTGGATGAACTGTAGATCAAGTGTCTATCCATGATATTCCTTGTGGGGAAAAATAGGAGGATAGTGACCCTTTGTTACGTGAACACTTACAGAAATAGACTTAAAATTTGCATTTGCATGTCAATCAATGGAAAGAAATGACCTTTCATCAGATAAGGTCAAGGGTTCGTTGATCTTTCTGTCTGAACAGTGAGGATGAATAGTGTCTGAGTTCAACAGTGGGTGGAATGAGAGGAGAAGGAATGGAGAAAGTGAACAGGAATGGAGAGGGAAATGGAAGAATACCCTGAATATTACCATGAGTTAGCTGAATGTTGACATAGATGGAGTCCTTGTCTATAATTCTACTGCTGATGAGTGTTGTTTAGAAGGATGGCCTTGATACATTTGTCCATGACACAAACACAAGGTACATTTTATTGTGACACAGCCATAGGGCCAATCAAGAGAACAGGATGTGATGTAAATACAAATGTCGAtatctacagtgtcttcagaaagtgttcacaccacTTAGTTTTCTCCacgttttgttgtgttgcagcctgattTTAAAATGCATTAAATTGAGAATTTGTGTCACTTATATTCAGCCAgttccccataatgtcaaagtggaattttgtttgttgAAAATGTTTGATATAATAccaattaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034950.1 True 1220 mRNA 0.42 4 33358447 33392252

Neighbor

gene id symbol gene type direction distance location
LOC110537471 LOC106567958 coding downstream 211803 32656737 ~ 33146644 (-)
LOC118937663 NA coding downstream 515582 32840386 ~ 32842865 (-)
LOC118937881 LOC106568064 coding downstream 883327 32472658 ~ 32475120 (-)
LOC110537466 LOC106567955 coding downstream 942168 32414563 ~ 32416279 (-)
umodl1 LOC106568047 coding downstream 957182 32390534 ~ 32401265 (-)
LOC110537472 ints2 coding upstream 4322 33396574 ~ 33418705 (-)
med13a med13 coding upstream 26831 33419083 ~ 33532690 (-)
rps6kb1a LOC106567964 coding upstream 233511 33625763 ~ 33637546 (-)
LOC110537478 NA coding upstream 275283 33667535 ~ 33707659 (-)
LOC110537479 NA coding upstream 317076 33709328 ~ 33746715 (-)
G1062411 NA non-coding downstream 1479 33356526 ~ 33356968 (-)
G1062400 NA non-coding downstream 4018 33354195 ~ 33354429 (-)
G1062399 NA non-coding downstream 4636 33353287 ~ 33353811 (-)
G1062269 NA non-coding downstream 108342 33249878 ~ 33250105 (-)
G1062267 NA non-coding downstream 109754 33247752 ~ 33248693 (-)
G1062454 NA non-coding upstream 55 33392307 ~ 33392507 (-)
G1062567 NA non-coding upstream 45022 33437274 ~ 33437582 (-)
G1062568 NA non-coding upstream 45458 33437710 ~ 33438298 (-)
G1062572 NA non-coding upstream 63675 33455927 ~ 33460677 (-)
G1062580 NA non-coding upstream 86235 33478487 ~ 33478696 (-)
G1062051 NA other downstream 272381 33039485 ~ 33086066 (-)
G1061331 NA other downstream 1365892 31991210 ~ 31992555 (-)
G1059610 NA other downstream 2287587 31067585 ~ 31070860 (-)
LOC110537432 NA other downstream 2584640 30738076 ~ 30773877 (-)
LOC110537425 LOC106567906 other downstream 2721725 30633836 ~ 30638038 (-)
G1062603 NA other upstream 120673 33512925 ~ 33513375 (-)
cenpv LOC107676655 other upstream 1365002 34755024 ~ 34759345 (-)
LOC110537499 emc6 other upstream 1413507 34805721 ~ 34807675 (-)

Expression


Co-expression Network