timm22 (LOC106567977)


Basic Information

Item Value
gene id timm22
gene name LOC106567977
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 34361271 ~ 34365249 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623561.2
CACACACACTCATCATGGCGGCGACCGTAGGTAGTGGAAATGCCCCTGTGTCGGACACTCAAGCCTCAACCTCGGCTGATCGGAGCTATGAAGGTTCAACATTTCAGTACAGCATGGTCCTGGAGCACCTCATCGGGGAGAAGAGGCCAATTAAGGATCTGAATCCGACCGTTATGGGGGGTCTTCCCAATCCCATGAAAACCGACGACCAGAAGATGATCGAACAGGGAATGGAGAGCTGTGCTTTCAAGGCGGTGTTGGCCTGTGTTGGAGGGTTTGTTCTCGGGGGAGCGTTTGGTGTGTTCACGGCTGGTATAGACACCAACGTGGGATTTGACCCCAAAGACCCCATGAGAACACCCACGGCCAGAGAGGTTCTCAAAGACATGGGCCAGAGGGGAATGTCCTACGCCAAAAACTTTGCTGTCATTGGGGCAATGTTCTCCTGCACAGAGTGCATCATTGAATCGCACAGGGGGAAGTCAGACTGGAAGAACGCTGTCTACAGTGGTTGTGTTACTGGGGGAGCAATAGGATTTCGAGCTGGGGCGAAGGCTGGCGTGCTGGGATGTGGAGGTTTCGCTGCCTTCTCTGCTGCCATTGAGTACTATCTTCGGTGAAAACCAGGTCACCTTCTATACCTTTGAACTATTGTTGAGGGATCACTGTCCCTCTGGACCAGAAAGACTTTATACCtcatggagagagaaaaacatcCCTGCTCTGCAGGTGGAGCATCTTATCATGAGGATTATCTACACTTGGACAATATCCTGTGCACTGTATTTACAGTGATGTCATACAGGGTTGGCCAGTCCAGGCTTGTGGCCCACTTGTTATGCTGGCTTTGCCTATCTAAAAAGTTAAGTCATTGAGATGAACCTCTAATCAGTTGTAGTCGAGAGCTGGCTAGTTTAGTTTTTGTGCGTAAAATAAAGCCTGGTGAAATCAAGTCAATGGCCGCATTTGCATGGTAAGGACAAAAGTCGAAGGTGTATGGGGGACAGCCGGACACTGGTTTGCGACAGCAGCgctcagatcaacatggcagtgttgccattgtGTATAAAAGGTTTACATTGTAATGTAGAAATAAACATGTCTCCAACATCCATAACAAA

Function

NR:

description
mitochondrial import inner membrane translocase subunit Tim22-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K17790 TIM22; mitochondrial import inner membrane translocase subunit TIM22

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623561.2 True 1121 mRNA 0.49 4 34361271 34365249

Neighbor

gene id symbol gene type direction distance location
c12h11orf54 cssa13h11orf54 coding downstream 235342 34117042 ~ 34125929 (-)
akap10 LOC106567970 coding downstream 258189 34082458 ~ 34103082 (-)
LOC110537486 LOC106567973 coding downstream 279204 33877389 ~ 34082067 (-)
cltca LOC106567969 coding downstream 505798 33790655 ~ 33855473 (-)
LOC110537479 NA coding downstream 614556 33709328 ~ 33746715 (-)
zswim7 zswim7 coding upstream 206915 34572164 ~ 34590518 (-)
ncor1 ncor1 coding upstream 237029 34602278 ~ 34725530 (-)
cenpv LOC107676655 coding upstream 389775 34755024 ~ 34759345 (-)
LOC110537499 emc6 coding upstream 440472 34805721 ~ 34807675 (-)
LOC110537500 LOC106567988 coding upstream 496176 34861425 ~ 34955823 (-)
G1063927 NA non-coding downstream 125477 34233571 ~ 34235794 (-)
G1063803 NA non-coding downstream 210455 34115538 ~ 34150816 (-)
G1063650 NA non-coding downstream 485195 33875871 ~ 33876076 (-)
G1063649 LOC106567971 non-coding downstream 485672 33875095 ~ 33875599 (-)
G1063648 NA non-coding downstream 486606 33874368 ~ 33874665 (-)
G1064029 NA non-coding upstream 22744 34387993 ~ 34397918 (-)
G1064132 adora2b non-coding upstream 188663 34553912 ~ 34554918 (-)
G1064126 NA non-coding upstream 204731 34569980 ~ 34570395 (-)
G1064140 NA non-coding upstream 210889 34576138 ~ 34576370 (-)
LOC110537478 NA other downstream 653612 33667535 ~ 33707659 (-)
med13a med13 other downstream 828630 33419083 ~ 33532690 (-)
G1062603 NA other downstream 847896 33512925 ~ 33513375 (-)
G1062051 NA other downstream 1275205 33039485 ~ 33086066 (-)
G1061331 NA other downstream 2368716 31991210 ~ 31992555 (-)
LOC110537509 galnt10 other upstream 854286 35122172 ~ 35260534 (-)
G1064912 mrpl22 other upstream 1111588 35476837 ~ 35484504 (-)
G1065969 NA other upstream 1427106 35792355 ~ 35810394 (-)

Expression


Co-expression Network