LOC110537508 (LOC106567994)


Basic Information

Item Value
gene id LOC110537508
gene name LOC106567994
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 35071760 ~ 35114805 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623601.2
GCGCAGGGATTTCGGGTTTCCGCACCGTGCCTTTTCCTGGATGCTGCGAAAACAGGATTAGGGAGGGTTGAACGGTGTAACAGCACGCCCTATATAACACAAGTATCTGTTGTCTATATTGTCACTATTGAACCGACATAGCTAGGTAAACGAAATTTATCGTCCTATTACACCAGTTGTAAAACTAGTCTTTGTAATAGCTAAATAATTCATTGAAATGGAGCGCTGGAAAGGCAGAGTAGCTCTAGTGACTGGAGCTTCGGTCGGGATTGGAGCGGCTGTTGCACGGGCACTTGTCCAACACGGCATGAAGGTTGTCGGATGTGCCAGGAATGTTGACAAGATAGAGAAGCTGGCAGCCGAGTGCCAGAGCGCGGGCTACAGCGGCACGCTGATCCCCTATAAGTGTGACCTGTCCTGTGAGGAGGACATCCTGTCCATGTTCTCTGCCATCAAGACACTGCATCAGGGGGTGGATGTGTGTATCAACAACGCAGGCCTAGCCCACAACGAACCCCTGCTCAGTGGCAAGACTGACGGCTGGAGGAACATGATCGATGTGAATGTCCTGGCCCTGTCAATTTGTACCCGCGAGGCCTACCAGTCAATGAAAGAGCGGAATGTGGACGATGGCCACATCATCAATATTAACAGTATGGGGGGACATAGAATGGTACCTAGTGCAGATGAACACTTCTACTGTGCCACTAAATATGCTGTTACTGCTCTAACGGAGGGGCTACGGCAAGAGCTGCGGGAAGCAAAGACTCACATCAGAGCCACGTGTATATCCCCTGGAATAGTGGAGACTGAGTTTGCCTTCCGGCACCACAACAGTGATCCAGAGAAAGCAGCTGCTGTGTATGAGAGTATAAAATGTTTGAAAGCACAAGACATAGCCAGTGCAGTCACATACGTTCTGGGCACCCCGCCTCACGTCCAGATCGGAGATGTGCAGATGAGGCCGGTGGAACAGGTGTCATAGCAACCGAGCAAGAAGGAATCAGCTGAAGGAGCAGATAGAGCCATGGTGACGACTCCTTAGCGACCCCTGCCGGGCAACGACGAAAATAAACTAGTATTCAACTGGATTTGGAGTGAAGGGATCTGTTTGAGGGGGCGTGGAGGTggctgtgtgtggtgggggggggggggatctctggTGAGGAAAGGGTGGGCAGGTACTCTTAACCACCACTGAATTACTATGAGTGCTGCAACATGGTCTTTGGTGTATTGCTCTGAAGCCACTGCAAACTTAGGAGAGGAGGGTTGTTGCTCCTGTGGTCATATGCCTGCCTGACCATCTTGACAGAGGGAAGAGTATGCCATGAATTGCATTTTTGTTTTTGTAAGTCATAATACATATCTGTTTAAAATGATGGAAGACAACACTGCTATTCAATAAAGAatgataattatatatatatatatatttttttttgtatagGTATTTTAGCTTTGATTATTGGTAGATGTGGCTGATATTCTGTACTCCCTAACCATAGATGCTCAATCCATTTCTACGGTCTTATGTTTTTAATAACAAGCAGATTTGGTTATCCTGGTATTAAGTCTGCTCGTATGTTTTTCAAAACCCATGTTAACCATCACTAATCAGAAAATGTGTATACGGGACATTCAAGCACGATTACGCAACCCCATCACTTTGGAGCAAGTGTATTTCCCCACTCCCATATGATTTTAAATTGTTTTGCACTTTGGATCCATTTGGAGGAGTATAAAGAAAACGCTGTCATCTTGTCTAGAGGAAGTAACTTACTTGTATACTCTCCCCAAGTGTGTACTTGTATGATATAGTAGATGTTTATCAATAAAAATAATTTAGGGATTGTCAAA

Function

NR:

description
dehydrogenase/reductase SDR family member 11

GO: NA

KEGG:

id description
K22970 DHRS11; 17beta-estradiol 17-dehydrogenase / 3beta-hydroxysteroid 3-dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623601.2 True 1860 mRNA 0.46 7 35071760 35114805

Neighbor

gene id symbol gene type direction distance location
LOC110537504 LOC106567991 coding downstream 57487 34979146 ~ 35014273 (-)
LOC110537503 NA coding downstream 108801 34961595 ~ 34962959 (-)
LOC110537500 LOC106567988 coding downstream 115937 34861425 ~ 34955823 (-)
LOC110537499 emc6 coding downstream 264085 34805721 ~ 34807675 (-)
cenpv LOC107676655 coding downstream 312415 34755024 ~ 34759345 (-)
LOC110537509 galnt10 coding upstream 7367 35122172 ~ 35260534 (-)
LOC110537510 mfap3 coding upstream 282079 35396884 ~ 35401227 (-)
LOC110537516 LOC106568002 coding upstream 1177902 36292707 ~ 36310874 (-)
LOC110537517 wwc1 coding upstream 1196310 36311115 ~ 36358023 (-)
LOC110537518 LOC106568005 coding upstream 1282793 36397598 ~ 36400542 (-)
G1064629 NA non-coding downstream 1422 35070053 ~ 35070338 (-)
G1064628 NA non-coding downstream 1943 35069604 ~ 35069817 (-)
G1064266 NA non-coding downstream 248594 34822961 ~ 34823166 (-)
G1064264 NA non-coding downstream 249861 34821683 ~ 34821899 (-)
G1064664 NA non-coding upstream 217 35115022 ~ 35115247 (-)
G1064666 NA non-coding upstream 4338 35119143 ~ 35119607 (-)
G1064667 NA non-coding upstream 5576 35120381 ~ 35120653 (-)
G1064788 NA non-coding upstream 225076 35339881 ~ 35344998 (-)
G1064815 NA non-coding upstream 266639 35381444 ~ 35381648 (-)
LOC110537478 NA other downstream 1364101 33667535 ~ 33707659 (-)
med13a med13 other downstream 1539119 33419083 ~ 33532690 (-)
G1062603 NA other downstream 1558385 33512925 ~ 33513375 (-)
G1064912 mrpl22 other upstream 362032 35476837 ~ 35484504 (-)
G1065969 NA other upstream 677550 35792355 ~ 35810394 (-)
G1066054 NA other upstream 824438 35939243 ~ 35939571 (-)
G1066163 NA other upstream 984225 36099030 ~ 36099474 (-)

Expression


Co-expression Network