LOC110537510 (mfap3)


Basic Information

Item Value
gene id LOC110537510
gene name mfap3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 35396884 ~ 35401227 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623603.2
tggcggtgtatgCACCTGTCGGTTGGTTGTGATTCGCCAATAAAActtaaagaagaagaagattaTTGCTGGAGAGAGATACAGTGCTGATTGTATGGAGATTGTGACAGCCGGTTAAATGGCATCCCTTGAGAAGTCTAATAGATGGCAGTAATGCAACATTGAATGGCTTCCAACTGCCGTTTAACCTCATCGAAGAAGAAAAGAGCGCAACGACGGATAGACGAGAACATCTTTGGCGCAAGGTTGGTTTCTTCAGATTTTGACCACGCCCACTGCTGAATGCGGAAGTCACCAGTTGCTGCTGTTTGTGTGCATGAAGGTTTTAGAGAACTTTCCCTTGATGTGAACTGAAGATTGTACTGCTCCCCAACATGTCACATACACAAGCACACAGCTACACACTGATTAcaaagtgtgtgtgcatgatcATCACACAACTCTTTGCCTCTGGACATGCAGAAGAAATGACAAAAGATGGAAAACAGAACCGTTCTCTGGTATCCATCCACTACCTTGCCAGTTTACCTACTCTCCGGGATATCATAGTGAAAGAGGGAGCCAGCACTCTGATTGAGTGCAATGTCACTGGAAAGCCAGATTACATTCAGTGGTACAATTCCAAAGGGCACGTTCTGGATGCGGAAGAGGGAGGTGGGAAATGGCTGATTCAGGACAAGGGCGTTTTAAATATCACAACGGTCAGTTTTGAAGACCGAGGCCGATACACCTGCATAGCCTCCAGCTCGGCAGGGACCTCCAACTACACCATCACCTTACGGGTGGCCTACGTCCACAGCGGCCTGGGCCTGTACTACGTCATTGTGTGTCTCATCGCCTTCACCATCACCATGATCCTCAATGTCACGCGCCTCTGCATGGTCAGCAGTCACCTGAAGAAAACGGAGAAGGCCATCAACGAGTTCTTCCGCACCGAGGGAGCTGAGAAGCTCCAGAAGGCCTACGAGATAGCCAAGCGCATCCCCATCATCACCTCAGCCAAGACCATGGAGTGGGCCAAGGTCACCCAGCTCAAGACCATGGAGTTTGCCCGCCACATGGAGGAGCTGGCCCGCAGTGTGCCACTTCCCCAGACCATCCTCAGTTGCAGGGCCTTTGTGGAGGAGGTTATGGAGACGGTGCACACCTCGGTGGGGGCGACAAGCATCCAGAAAGCTATAGAGCCAGCCAACCCAGAGGGGAGAGGTAAAACCTGTGAGGTCCAGATGTCAGCAGAGCAGCAGGGTCCAGCAGCACATGGCAGAGAGGATGATGTTGATGGTACCATTGAAAACAGCCTGGACATTGAGGTGTCTGTACACCCTATGTCCAAGTGTGAGGATGAGAAGTGGGCTGAAGGGGATGAGGTGTCTGTACCCATGCTGGGGCCATGCTCCAGTGGGAGTGTGGCTTATGAAAGTTGCATTTAGTTGTGCGAGTCAGGTCTTTACAACTAATATTTTCCAGTTAGTTGTGAGGTCAAAAGCAAAGGGCTGCTCAGATGGTGGGAGTTGAGAGGTATTCTGTGTTTAGGATGCTACTGCCTCTATTTCATAGAGAAAATACATTGGATGAAACCTAAAGATGTTTCAGAGATGAGATAAGCCCTGATAGCAGTGGTATTGGTATATGGTATTTACTTCACTACTTGCCTCAGTTTAAATGAAGGATTGATTTGGTTGTTTGCTTGTGTGTTTGTAACTTAACACATTAGAAAAAATAAgaaacctgcacactgctcttgctagtatcactgctctttattaagcttGATGTATCAGCCTTcaaaaagctctgacgaaggccttgaggccgagatgtaaagcttaataaagagcagtgatactagtagtGTGCAGGTTTGCAGGTTTCACTAGTATCACTAGTGATACTAGTGATACTAATAGTGTGCAGGATTCTTCCGTGCACCTGCAACAGAGGTGGCTCAGATGTGCCTTTTTGAATTTTGTATCTAAACAAATAACATGTTGTTATTTTTAAAATCACTTGGAATATGGGTTGCACAAGGCAATCTAGCAAATTAAGTACAATTTTACTCGGGGTAATGGGTGTAAtcagtggtataaagtacttaagtaaaaaatacttaagtactacttaattagtttttgggggtatctgtactttactatttatacttTTAAAAAcgtttactttactacatt

Function

symbol description
mfap3 Predicted to be located in extracellular region. Predicted to be active in cytoplasm; nucleus; and plasma membrane.

NR:

description
microfibrillar-associated protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623603.2 True 2186 mRNA 0.46 4 35396884 35401227

Neighbor

gene id symbol gene type direction distance location
LOC110537509 galnt10 coding downstream 137947 35122172 ~ 35260534 (-)
LOC110537508 LOC106567994 coding downstream 282079 35071760 ~ 35114805 (-)
LOC110537504 LOC106567991 coding downstream 382611 34979146 ~ 35014273 (-)
LOC110537503 NA coding downstream 433925 34961595 ~ 34962959 (-)
LOC110537500 LOC106567988 coding downstream 441061 34861425 ~ 34955823 (-)
LOC110537516 LOC106568002 coding upstream 891480 36292707 ~ 36310874 (-)
LOC110537517 wwc1 coding upstream 909888 36311115 ~ 36358023 (-)
LOC110537518 LOC106568005 coding upstream 996371 36397598 ~ 36400542 (-)
LOC110539141 NA coding upstream 1011025 36412165 ~ 36413564 (-)
LOC110537521 LOC106568007 coding upstream 1111966 36513193 ~ 36620615 (-)
G1064815 NA non-coding downstream 15236 35381444 ~ 35381648 (-)
G1064788 NA non-coding downstream 51886 35339881 ~ 35344998 (-)
G1064667 NA non-coding downstream 276231 35120381 ~ 35120653 (-)
G1064666 NA non-coding downstream 277277 35119143 ~ 35119607 (-)
G1064664 NA non-coding downstream 281637 35115022 ~ 35115247 (-)
G1064845 NA non-coding upstream 4335 35405562 ~ 35405844 (-)
G1064905 fam114a2 non-coding upstream 6508 35407735 ~ 35408683 (-)
G1064904 NA non-coding upstream 16047 35417274 ~ 35418071 (-)
G1064910 NA non-coding upstream 25961 35427188 ~ 35427393 (-)
G1064931 NA non-coding upstream 66938 35468165 ~ 35468387 (-)
LOC110537499 emc6 other downstream 589253 34805721 ~ 34807675 (-)
cenpv LOC107676655 other downstream 637718 34755024 ~ 34759345 (-)
LOC110537478 NA other downstream 1689225 33667535 ~ 33707659 (-)
med13a med13 other downstream 1864243 33419083 ~ 33532690 (-)
G1064912 mrpl22 other upstream 75610 35476837 ~ 35484504 (-)
G1065969 NA other upstream 391128 35792355 ~ 35810394 (-)
G1066054 NA other upstream 538016 35939243 ~ 35939571 (-)
G1066163 NA other upstream 697803 36099030 ~ 36099474 (-)
G1067390 LOC106568016 other upstream 1508204 36909431 ~ 36912757 (-)

Expression


Co-expression Network