LOC110537518 (LOC106568005)


Basic Information

Item Value
gene id LOC110537518
gene name LOC106568005
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 36397598 ~ 36400542 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623622.2
CCATCGAAGAAGAATTAGAACACATGCGTCCACACTTGCTTCCTGCTCAGTTCCACGCGTTGTTCAGAATCAAAAGGTAGCTCGTTTTAAAGCAAAGTAACAATGCCTAAAGCCAAAAAGAAAAGGAAAGGAAACACGTTTGACTACAGTAAAGACAGAAAGAAACTTAAAAAGCAGTTTAAGAAAAGGGAAGCCCCGAGAATAGAGTGTCCTCAGATCCGAAATGCCTGGAGTGACAAAAAGTCTGTGGCAAGAAACTTGCGAGACATGGGTCTGGCATTTGACCCAAACCGCGCCCTCCCAATTAAGACACCAGCTATTGCTGCTGTGGGGAGAACTGAAGATGCTACCGCTCCCAAACTTGTAAGGAAGCCATATGTACTCAATGAGCTGGTGGCTGAGGCCAGTCTCCCAGAGAAAGACACAAAGACCTTATCCACAGACTTGATCGAGTATGTGCAGTACATGGTCAGGGAACACAGCGAGAACTACAAGGCTATGGCCAGAGATGAGAAGAACTATTACCAGGACACTCCCTCGCAGATCAGGAGGAAAGTGGACCAGTATAAACGTTGCCATCCAGAGGAATACACCACCTTCATGGAGTCTCTCAAAGGTGGGAAAGCAGTTTCCACATAACTGGCTGTCTGTGGTGGGAAAAGACGTTCAATGTGAAGGGGGGAAGAAACCATTCCTCTTCAGCAAGTATTGTGACTGTGGTAAAGATGAACAGGAGATGGGGGTCAAAGTGCACCCAGAAACACAAGCTTTCTTAATTTAGAATAGACGGTGAGTTGGGATTTTAAAGAACTGTAAACATTTGAGAAAAAGACAAGACAAGATTTAACATGCATAAAAtactcttttttttctccttcatACTTATAGTATGTTTCCCCAAAATACAGTTACACAAATGATATACAGTAAGAACATTTAAGTCTGCTTTTGTAATGATGTCAACATATGTTTGTAAGTTTCATTAATGCATTTCCTCTTTGGATTTTTTTTTGGGAAGATGTATAAGCATAGTCATTTGTCAAGCTTGTACAAAAGGTTGTAACAATgtcactgtaaaaaataaaagtcAGAAACCTTA

Function

NR:

description
nucleolar protein 16-like

GO:

id name namespace
GO:0005730 nucleolus cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623622.2 True 1099 mRNA 0.41 5 36397598 36400542

Neighbor

gene id symbol gene type direction distance location
LOC110537517 wwc1 coding downstream 39575 36311115 ~ 36358023 (-)
LOC110537516 LOC106568002 coding downstream 86724 36292707 ~ 36310874 (-)
LOC110537510 mfap3 coding downstream 996371 35396884 ~ 35401227 (-)
LOC110537509 galnt10 coding downstream 1138661 35122172 ~ 35260534 (-)
LOC110537508 LOC106567994 coding downstream 1282793 35071760 ~ 35114805 (-)
LOC110539141 NA coding upstream 11710 36412165 ~ 36413564 (-)
LOC110537521 LOC106568007 coding upstream 112651 36513193 ~ 36620615 (-)
LOC110537522 LOC106568008 coding upstream 229217 36629759 ~ 36641133 (-)
LOC110537523 LOC106568009 coding upstream 244527 36645069 ~ 36654649 (-)
LOC110537524 LOC106568011 coding upstream 269962 36670504 ~ 36700574 (-)
G1066315 NA non-coding downstream 18415 36378788 ~ 36379183 (-)
G1066257 NA non-coding downstream 127287 36270087 ~ 36270311 (-)
G1066254 NA non-coding downstream 130196 36267160 ~ 36267402 (-)
G1066253 NA non-coding downstream 131289 36265967 ~ 36266309 (-)
G1066248 NA non-coding downstream 139124 36258246 ~ 36258474 (-)
G1066331 LOC106568006 non-coding upstream 13544 36414086 ~ 36444481 (-)
G1066338 NA non-coding upstream 47654 36448196 ~ 36449810 (-)
G1066335 NA non-coding upstream 66956 36467498 ~ 36473377 (-)
G1066163 NA other downstream 298124 36099030 ~ 36099474 (-)
G1066054 NA other downstream 458027 35939243 ~ 35939571 (-)
G1065969 NA other downstream 587204 35792355 ~ 35810394 (-)
G1064912 mrpl22 other downstream 913094 35476837 ~ 35484504 (-)
G1067390 LOC106568016 other upstream 508889 36909431 ~ 36912757 (-)
G1067426 NA other upstream 536777 36937319 ~ 36937979 (-)
LOC110537534 LOC106568022 other upstream 619459 37019987 ~ 37039930 (-)
LOC110537540 LOC106567738 other upstream 1105338 37505206 ~ 37507238 (-)
LOC110537546 ppm1e other upstream 1202623 37603158 ~ 37667366 (-)

Expression


Co-expression Network