LOC110537523 (LOC106568009)


Basic Information

Item Value
gene id LOC110537523
gene name LOC106568009
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 36645069 ~ 36654649 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623628.2
CATTTTGTGTAATCTACATACCCGTTCTAGAGGTGGGTGTATCATCACCATTCCAAGGCGAACTCATGTGCAACTGTTTTGCAGGAAGTTGATGCAAGTCTGAACATTGCTGTCAAGACACGAATTTGTCCATTTAATCCACCAAAGATGAGTTCCACAGATACCAATGCCGAGAGCGACGACCCTGTCCCCAAGGGGGCCAGACTGAGCCGGGCCGTCGCAAACCTGGACACCATCCCCCCAGACACCCTCAGTGAGGTAGAAGAGTGTCTGCAGCCTTTCCGTCTCTCTTTGGAGAAGCTGCAGGACGTGTCATCTCGCCTGAGGAAGGACCTGATCAGAGGGctgggcaaacacacacactgccgggCACCCGTCAAGATGCTGCCCACCTTTGTGAGGGCAACACCTGATGGGAGAGAGAAGGGGGACTTCTTGGCTCTAGACCTGGGCGGGACTAACTTCCGGGTGCTGCATGTCCGTGTGGTGGAGGAGATGCAGAAGCTCCTGAAGATGGACAGTAAGATCTGTGCCATCCCCCAGGAGATCATGCTGGGGACGggagaacagTTGTTTGACCACATCGCTGCATGCCTGGCTGAGTTCCTGGAGTCTCTGGAGCTGAAGGATCAGACTCTGCCTTTAGGCTTTACCTTCTCCTTCCCCTGCGAGCAGAAAGATATCGACAAGAGCCTCCTGATCCACTGGACCAAAGGCTTTAACTGTTCCGGAGTGGTAGGAGAGGACGTTGTGAGGTTACTGAGAGAAGCCATCCACAGGAGAGGGGATTATGACATTGGTTCCGTTGCCATGGTGAATGACACGGTGGGGACCATGATGAGCTGTGGATACAGGGACCAGAGCTGTGAAATTGGCATGATCATTGGGACGGGGACGAATGCATGTTACATGGAGGAGATCAAAAATGTGAAGAGAGTAGAGGGGGAAGACGGCCGCATGTGCATCAACACAGAGTGGGGGGGATTTGGAGACGACGGATccctaaaggacatccagactGAGTTTGACCTGGTGGTGGATCGAGACTCACTCAACCCAggcgtgcatgtCTTTGAGAAGATGATCAGTGGGATGTACCTGGGAGAGATAGCCAGGCTGGTGTTGGTGAAGCTGGCTCGGAACAAGCTACTGTTTGGAGGAGATCTATCAGTGGCCTTGCTCACACAGGACAGCTTTGAGACCAGATTCATCTCCGAGATAGAGGAGGAGAACACAGGACTGCAGAAGGCCCAGGAGATTCTGTCAAAGCTAGACCTGCCTGCCGGGCCTGTGGACTGTCAGATTGTGCGTCTGGTGTGTGACTCTCTCTCCACACGCTCGGCCCAGTTGTGTGCCACTGCCTTGGCAACCATTGCCAACCGTATCCGTGTCAACCGTGGACTGGACCATCTAAGCACCACAGTGGGGGTGGACGGCACAGTATACAAGAAACACCCCAACTTCAGTGAGAAGCTCCAGGAGACTGTACGCATCCTGGCCCCCAAGTGTGATATCACTTTCCTCGTCTCCGACGACGGCAGCGGGAAGGGAGCTGCCATGGTAACGGCAGTGGCACAGAGGCTGGCCATGCAGTCCCGGATACTAGAGGACAtcgatggagaggaggaagaggaggatgaagaaaatTAAGCCATGTATTCGACCAGACAACTTGAAATGCAGTACCATGAAAATGTCCCCCTCAAATGCTTTTGTCATAGACAAAGATTGTAAGGTAGGGGAGACCAGGGAACAAAGTAGGAAATAGTCTACTTTTAGTCTTTAGCTTATTTGTGAAAATATTATTTGAGTTAGATTTATAATATTTTTATGCAAacatagtgcatttggaaagtattcaaacgccttaactttttccagattttgttgtgttacagcctcattctaaaatttatgaaataccccataaggacaaagtca

Function

NR:

description
hexokinase-2-like

GO:

id name namespace
GO:0046835 carbohydrate phosphorylation biological_process
GO:0006096 glycolytic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004396 hexokinase activity molecular_function

KEGG:

id description
K00844 HK; hexokinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623628.2 True 1941 mRNA 0.51 11 36645069 36654649

Neighbor

gene id symbol gene type direction distance location
LOC110537522 LOC106568008 coding downstream 3936 36629759 ~ 36641133 (-)
LOC110537521 LOC106568007 coding downstream 24454 36513193 ~ 36620615 (-)
LOC110539141 NA coding downstream 231505 36412165 ~ 36413564 (-)
LOC110537518 LOC106568005 coding downstream 244527 36397598 ~ 36400542 (-)
LOC110537517 wwc1 coding downstream 287046 36311115 ~ 36358023 (-)
LOC110537524 LOC106568011 coding upstream 15855 36670504 ~ 36700574 (-)
LOC110537525 NA coding upstream 52870 36707448 ~ 36709032 (-)
fgfr4 LOC106568015 coding upstream 115599 36770248 ~ 36789915 (-)
rab24 LOC106568018 coding upstream 260162 36914811 ~ 36921183 (-)
trnal-caa-105 NA coding upstream 281571 36936220 ~ 36936330 (-)
G1066335 NA non-coding downstream 171692 36467498 ~ 36473377 (-)
G1066338 NA non-coding downstream 195259 36448196 ~ 36449810 (-)
G1066331 LOC106568006 non-coding downstream 200588 36414086 ~ 36444481 (-)
G1066587 NA non-coding upstream 198990 36853639 ~ 36853868 (-)
G1066588 NA non-coding upstream 199801 36854450 ~ 36854703 (-)
G1066593 NA non-coding upstream 205634 36860283 ~ 36860562 (-)
G1067400 NA non-coding upstream 227676 36882325 ~ 36882600 (-)
G1066163 NA other downstream 545595 36099030 ~ 36099474 (-)
G1066054 NA other downstream 705498 35939243 ~ 35939571 (-)
G1065969 NA other downstream 834675 35792355 ~ 35810394 (-)
G1064912 mrpl22 other downstream 1160565 35476837 ~ 35484504 (-)
LOC110537509 galnt10 other downstream 1384535 35122172 ~ 35260534 (-)
G1067390 LOC106568016 other upstream 254782 36909431 ~ 36912757 (-)
G1067426 NA other upstream 282670 36937319 ~ 36937979 (-)
LOC110537534 LOC106568022 other upstream 365352 37019987 ~ 37039930 (-)
LOC110537540 LOC106567738 other upstream 851231 37505206 ~ 37507238 (-)
LOC110537546 ppm1e other upstream 948516 37603158 ~ 37667366 (-)

Expression


Co-expression Network