XLOC_002919


Basic Information

Item Value
gene id XLOC_002919
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 35429504 ~ 35431655 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006091
GTTTTGTTTGCTCTTGTAAATGTCCAGACGGCAGATAAGAACTGGAGGTGCTTGGGAGCTTTGCATGGAATAACCAGGTCTTGCCCCGTATAGCCGAGGTGATGGTGCACATATAGACATGCTCAAGGCTGTTGTTCTGCAGTTTTAAGACACTCTGGGCTGAGAAAAGGCCGTTTCCTCCAGGACTGATGCGGGTGATAGGCTGCAGGACACCAGGAGCTGAGGCGGGCTCTGAGCTCCACTGCAACACCGGCGCAGGATACACATCTCTGGTGGAGCACTGGACCAAACCCGACTCACTGCTGTTGATGGAGATCATCCTGATGGGAGCTGCAATGTTGAGCCATGACAATGATGTCATCAGAGAACCAGACATTGACTGAAGCATTtaacattgtacattttaattgcacacacactttaaatttGATATATCAGTGTGTTGAAcatcataataaaaatacaaaaaatttaacAGCATGTTTGAAGGAAGATTACTGTTTATACcaactaaattaatataaattaatgcatttCAGCAAAAGAAACAAACCTTCCACCATGGCAATAACATACGTCTGAGTCACATTGTTGACCACACATTTGTATCGTCCTTTACTCGTCTTATCTGCTT

Function

GO:

id name namespace
GO:0043227 membrane-bounded organelle cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006091 True 634 lncRNA 0.43 2 35429504 35431655

Neighbor

gene id symbol gene type direction distance location
XLOC_002918 gabrr3a coding downstream 18986 35367722 ~ 35410518 (-)
XLOC_002917 NA coding downstream 107867 35312892 ~ 35321637 (-)
XLOC_002916 prr11 coding downstream 171943 35250205 ~ 35257561 (-)
XLOC_002915 smg8 coding downstream 181002 35238488 ~ 35248502 (-)
XLOC_002914 ypel2a coding downstream 192555 35201850 ~ 35236949 (-)
XLOC_002920 si:ch211-244c8.4 coding upstream 106319 35537974 ~ 35542071 (-)
XLOC_002921 smg6 coding upstream 152992 35584647 ~ 35613752 (-)
XLOC_002922 BX663516.3 coding upstream 188678 35620333 ~ 35620449 (-)
XLOC_002923 NA coding upstream 218929 35650584 ~ 35654680 (-)
XLOC_002924 ovca2 coding upstream 232474 35664129 ~ 35668584 (-)
XLOC_002912 BX465844.1 non-coding downstream 265213 35160010 ~ 35164291 (-)
XLOC_002909 NA non-coding downstream 371060 35054281 ~ 35058444 (-)
XLOC_002906 CT573139.2 non-coding downstream 470326 34951060 ~ 34959178 (-)
XLOC_002902 BX510654.1 non-coding downstream 1102110 34327262 ~ 34327394 (-)
XLOC_002925 NA non-coding upstream 380097 35811752 ~ 36093533 (-)
XLOC_002926 BX088524.4 non-coding upstream 731524 36163179 ~ 36163294 (-)
XLOC_002939 NA non-coding upstream 1033688 36465343 ~ 36469895 (-)

Expression


Co-expression Network