fgfr4 (LOC106568015)


Basic Information

Item Value
gene id fgfr4
gene name LOC106568015
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 36770248 ~ 36789915 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623634.2
TGTTGTGACTTGCGCTCAGAGTGCAGCGGATCGGGTTAGCAACGAGACGCAGCAGTAGCCTATACCCACAACGTTAACAGAGTGGCTAGCTAGCCTAAATGAGATTTAGCTAGTTATTAAATGTACTGTGTTCTGTTGGGACCAACTCATTCACGAACAGACTCTGCGCGAGTGAAGAGCGAACCACGGTGCGCAAAGATTGACCAACATCTGTTCCATTGTTGCCGGGCTGTAGCCGAATAATTATCCACATTGAGAAGAGTGGTATAAGGGACTCTACGCCTCCTACATTGGAGATCTGTCTGTTTCTATTTGCAACAACCAATACAGATCTCGTTCAGTCTAATCTCAAGAGGAGAGAGAATTAAGCAGCAAGTTTGACCGAAGTCTCTCCCTATGGATTTAGCACTTTCTGTCGCGTGAGCCCCTGGAAAGAAGGAGACGGGCGCGCGAGCCTCATTCTGACGTGAGAACACAATCTGCTCAGGGTGAAGTGGACTCTGTGCCCCAGTCGGAAGGATCAGCTCTAGCTCCTTCCCAGTTTGCTCACCACCGACCTGCTGTCCTTCATGTTTTGGTTGTTTTGATGGATTTATAAGTGCATCTCCGAGGGTTCCACCCGGGCGCACACTGAAGAAAATCACCAAAGACAAAAAAAAGAGGATTGGACAGAAATCCAAATGAGGATTCCAATATTGACCTCGATCAAATGGAACTAGGATATTCTGGTGCCTAATCGAACTTTATCAAGGATTGATCATTGCGAGCAAAGAACGAAATTAAAGGTCCAGTTTTTGGGGTGTGTGTTGAGTTTGCCAATGCCCGGAATCGGTGTGTGAGACCAGGGTTGCCCCCTTcattcttcacacacacacacacacacacacacacacatctgcaagATGGTGAATGTTTACACGGCTTGCATCGTCatacactgtctgactgttggacTCCTGGCCAAAGCCATCGGGTCAGAAGACGGAAAAACAGAAGATTTGACAGTGTCTCGGCCACTCATCTTGCCTGGTTACCCTGAGAACGCTACGGCGGTTGTGGGGGGACAGGTGAAGCTGCTGTGTAAGGTCCACAGGCCAGCCATCACCAAGGTCCAGTGGCTAAAAAGAGACGAAGAGCGCCTGGGAGCCGAGGGCCAGCCACATCTCAGAACTCTGGAGGCCCTACAGAGCAACATCTCCAATGTGAACATTCTGTCTCTGAGCAACGTGTCGCTGGAGGATGCTGGAGAGTACATCTGTATGGCTGAGGCCACTACACACGCTGGACTACAGCTACAGTCCATGCAGTCTGCCTGGCTACAGGTTCTACCAGGGACCCTGATCTCCCGTTACCTGGACCAGAGTACGCCCATTGAAGTCCCAGCAGATGTCCTGGAGGACCTTAGTGAGGACACCACTGAGCACCTGCTCCTGGAACCGGGTGATGTCCTCAAGCTGCGCTGTGACACCAATCGGCCggggggggtgtactggtacagggAGGGGACCCGGGTGATGCACACCGCCCGCATCCAGATCCGCGGGGGCGTTATGGAGATCACGGACGTGACGTACGAGGATTCTGGGGTGTACGTATGTGTCCTCCGCGGGACCAAGGAGCCCCTGAGGAACTTCACCATCACTGTATTAGACTTACTGGGCTcaggtgatgatgatgaggacaACGGTCTAGAAGACACGTCGGCTGAGATTGAGAATGATCAGGTCTACTTCACAAGAGGTCCCTACTGGACCCACACCCAGCGCATGGAGAAGAAGCTGTACGCAGTGCCGGCAGGGAACACGGTCAAGTTCCGCTGCCCGGCCATGGGCAGCCCTCTGCCCTCCATCCGCTGGCTGAGGAACGGACGTGAGTTCAGGGGAGAGCACCGCATCGGAGGCATCAAGTTGAGACACCAGCACTGGAGCCTGGTGATGGAGAGTGTGGTGCCTTCAGACCGTGGGAACTACACCTGTCTGGTGGAGAACAAATACGGCTCCATCACACACAGCTACCTTCTGGACGTGCTGGAGCGCTCCCCACACAGGCCTATCCTGCAGGCTGGTCTGCCAGCCAACACTACAGCGGTGGTGGGCACTGATGTCCAGTTCTTCTGTAAGGTCTACAGCGATGCCCAGCCCCACATCCAGTGGCTGAAACACATTGAGAGGAACGGCAGCCGCTACGGCCCCGATGGGACTCCCTACGTTCAGATACTGAAGACAGGCAGCCTCAACATGTCGGAGGTGGAAGTTCTCTACCTGACTAAGGTGACCATGGAGGATGCTGGAGAGTACACCTGTCTGGCTGGAAACTCCATTGGCTTCTCCCACCAGTCTGCCTGGCTCACCGTCCTCTTGGAGGAGGACGTGGCTGACGAGGTGGACCTAATGGAGACCAAGTACACTGACATCATCATCTACGCGTCTGGCTTCCTGGCTCTGGTTATGGCCATCGTTATCGTGGTGCTGTGTCGCATGCAGGTAAACCCCAGCAGAGAACCCTTCGATGTCCTCCCTGTCCAGAAACTCTCCAAGTTCCCCCTCCGCAGACAGTACTCTGTGGAGTCTAACTCATCAGGAAAGTCCAGTGCGTCTCTGATGAGAGTGGCCCGCCTGTCTTCCAGCTGCTCCCCTATGCTGGCCGGAGTCATGGAGTTTGAACTGCCCTACGACCCCGACTGGGAGTTTCCCAGGGAGAATCTGACGTTAGGGAAGCCACTGGGTGAGGGTTGTTTCGGCCAAGTGGTCAGAGCTGAGGCCTATGGGCTCAACAAGGACCATCAGGAGAACATCTCCACTGTGGCTGTCAAAATGCTGAAAGATGATGccacagacaaagacctgtcagACCTCATATCTGAGATGGAGCTGATGAAGGTGATGGACAAGCACAAGAACATCATTAACCTCCTGGGGGTGTGCACAGAAGATGGTCCTCTGTACGTGCTGGTAGAGTATGCGTCTAAAGGTAGCCTCAGGGAGTACCTGCGGGCCCGCCGGCCACCTGGCATGGACTACACCTTTGATGTGACCAAAGTGCCCGAGGAGCAGCTCACCTTCAAAGACCTGCTGTCCTGTGCCTACCAGGTGGCACGTGGCATGGAGTACCTGGCATCCAAAAGGtgcATCCATAGAGACCTTGCTGCCAGAAACGTCCTCGTTACGGAAGACAACGTCATGAAAATCGCAGACTTTGGCCTTGCTAGAGGAGTGCACCAGATTGACTACTACAAGAAAACCACCAACGGACGTCTGCCAGTGAAGTGGATGGCACCAGAGGCCTTGTTCGACCGAGTCTACACACACCAGAGTGACGTGTGGTCGTTTGGGGTACTGATGTGGGAGATCTTTACCTTGGGGGGCTCGCCCTACCCCGGTATCCCTGTGGAGGAGCTCTTCAAGCTGCTGAAAGAAGGCCACCGCATGGACAAACCCTCCAACTGCACACACGAGCTCTACATGAAGATGAGGGAGTGCTGGCATGCCGTGCCCACACAACGACCCACCTTCAAACAGCTGGTGGAGGAGCTGGACAGAGTGCTGCTGTCTATCTCTGACGAGTACCTGGACCTGTCAACACCTTTCGAACAGTACTCCCCATCGTGCGAGGACACTTCCAGCTCTTGCTCCTCGGACAATGACTCTGTCTTTACCCACGATGCCCTGTCCACCGACCCCTGTCTGTTGGGTTACCACGACGTGAATTCTCGGATTGACCTGAAACCGGCACTGCGGTAGACAGCGGCTCCAATGCGAGTCCTCTGTCTCAAAGGGCATTACATGGAGAGGTTTACTTTGGGAAACGATCATGTTGCATGAAAAGTGGTACTTGGACTGTCTGCTCTGGCACTGTGCCCAACAACAGTATCTCAAACCTTGGCACTTGGCACTACAGAACCCTGGTCATCTAAAATGGCTGCCTCTTATCAGGTTTGGGTTTTTACAGTAAAAGGACTCTCTTTTGTTTGGGTCTCTACAGAGAGGATGGACAATGGTCATCTTGTACTCAAACTCATCTGAGCTAGCATCTGAACAGTATCCAAACTGAGCTTTTAAAACAGAAAAAGAAGTTTTAacataaaatatttattttgataTGGGAAAAAAACAGAGAAGCTGATTGTTAAATATAAATCTCTCTATATATAAGATTATTTTACATTTTGCTATTTAAAATTGTCTTAAATCTCAGGATCTCTTGTGTTAAAAAGTTGCTGTAGAGGCAGCAAAGTGcctgattttttttcttcctgtgAATATATTAAAATAGAAAAATGTTTTATGTACATatcataaaaaatacaattaccTTTTATAAATTATTCTAAATGATACAAAAATGAAGGTGTTCAACTGAGGTGAAGAAAGAAATAATGTATTCAAGCGTTTTAACGGCCAAAATGTCCTCGCAATTCACCTTCCATTTCATCAAAATCCCTTCAGTCCTCTGTTTGTACGCTGCTCTGGCCTTTGTATTGCATCCAGGCCAATCGCCAAAGCCCTCAGAACCCCCAATCCCTTATGCTTTCAATTGTTGCAAACATAAACTAACTATAAGAACAGTATGGTCTGGGGGTTTGGGCCCTGAAAGAGAAGAATACAATTAAACACAGGACACTGTGGGGGGACAGGGGGAGCAGCCCAGCTTCCACTGTCAATGCTGtatgaaaagaaaagaaaaggccTGGACCTGAAGGTCTGAATGTGAAAAGCCCAGTGTGATTGATTTTGAATCCTCCTCTTTTGTTTCCCCTTTAACCAGGCCCAGTGTGTTTGTAGAGGTacaggctgaggctgaggctgggcctGGACAATAGGGTCTTTGGCAGTCCTGATGGGTGTGACTGTGGGGACAGGGATGGTGGGGGGATCCGGTAGCTTCAGCCCGTCAGCACCTCAGCCTGGGCCTGTGTGCAAATGAAGACTCCCTTATTATGATAATGCTTGGCTCCCAGTGATACCAATCTTTATTCTGCTACCATCTTTTAATATACATATGCTAATTCTTATGCTTTGTTACAATTGGGGAGAATACTCTAAATGTCCTCCAGGGAATGCAAATGGTTCACCTCGAATCATATAGATAAGCCTCCAATGTTGTTGTTTCAACAACGCTTCAGAATCGAACTGCCCCGACTGTTTTTCATTCAGAATACTCACAAGCATTTGTATAAAAATGGTGGTGTTGTGGGTTGAAAGCAAAGCATAATGCACATACAATAACAAGCAATTCAGGTACCAGGGCAGTGGGACTGGCTACCTTTTTGTGTACATTTATTTGGTGGGTCATCATTTTTTGGAAAACGAAACATTTAGCAATTTAGCTCAAAAATCGTTTTTTTCTACTCGAAAGCAGCATGACCTCCAACTGAAAACCAAACCATGAGCTACAGAACAGCCTATATGAATTGAACTTAGCCCTTCAACATCGAGAGTTGTATCACAATGATCCtcagtgttgttgttttgatTCCCGTACTACAGAACGTCAGGGTCAACTGCATGACATTCCATTTATGTACGCCCAATACAATTGTAACAATCACAATGTTCTTTAATAAAAATTCATCAAGATCAttattttagaaatatgtaatttatttgtttattgttttgtttttgtatgaAATAAAGTATAATTTAAAAGAT

Function

NR:

description
fibroblast growth factor receptor 4-like

GO: NA

KEGG:

id description
K05094 FGFR3, CD333; fibroblast growth factor receptor 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623634.2 True 5651 mRNA 0.49 16 36770248 36789915

Neighbor

gene id symbol gene type direction distance location
LOC110537525 NA coding downstream 61279 36707448 ~ 36709032 (-)
LOC110537524 LOC106568011 coding downstream 69674 36670504 ~ 36700574 (-)
LOC110537523 LOC106568009 coding downstream 115599 36645069 ~ 36654649 (-)
LOC110537522 LOC106568008 coding downstream 129115 36629759 ~ 36641133 (-)
LOC110537521 LOC106568007 coding downstream 149633 36513193 ~ 36620615 (-)
rab24 LOC106568018 coding upstream 124896 36914811 ~ 36921183 (-)
trnal-caa-105 NA coding upstream 146305 36936220 ~ 36936330 (-)
LOC110537534 LOC106568022 coding upstream 230072 37019987 ~ 37039930 (-)
LOC100136717 LOC106568026 coding upstream 341870 37131785 ~ 37138071 (-)
LOC110537538 NA coding upstream 655971 37445886 ~ 37448950 (-)
G1066438 LOC100136012 non-coding downstream 29214 36616543 ~ 36741034 (-)
G1066291 NA non-coding downstream 110172 36396126 ~ 36660076 (-)
G1066335 NA non-coding downstream 296871 36467498 ~ 36473377 (-)
G1066587 NA non-coding upstream 63724 36853639 ~ 36853868 (-)
G1066588 NA non-coding upstream 64535 36854450 ~ 36854703 (-)
G1066593 NA non-coding upstream 70368 36860283 ~ 36860562 (-)
G1067400 NA non-coding upstream 92410 36882325 ~ 36882600 (-)
G1067417 NA non-coding upstream 116789 36906704 ~ 36907137 (-)
G1066163 NA other downstream 670774 36099030 ~ 36099474 (-)
G1066054 NA other downstream 830677 35939243 ~ 35939571 (-)
G1065969 NA other downstream 959854 35792355 ~ 35810394 (-)
G1064912 mrpl22 other downstream 1285744 35476837 ~ 35484504 (-)
LOC110537509 galnt10 other downstream 1509714 35122172 ~ 35260534 (-)
G1067390 LOC106568016 other upstream 119516 36909431 ~ 36912757 (-)
G1067426 NA other upstream 147404 36937319 ~ 36937979 (-)
LOC110537540 LOC106567738 other upstream 715965 37505206 ~ 37507238 (-)
LOC110537546 ppm1e other upstream 813250 37603158 ~ 37667366 (-)

Expression


Co-expression Network