LOC110539143 (LOC106567739)


Basic Information

Item Value
gene id LOC110539143
gene name LOC106567739
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 37777987 ~ 37790177 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939654.1
GTGGGTGCTGGTGGCCTATGAATGGGGCTGAGCGTGCACCCCACCACCACACCTGCCTCTGCACCCGTGGGGACTATGCGTTGCACAACCCTGAATGCACTAGCCGGTGGTTTGCGAGAACAGGGAAGGGGGCGGAACGTCGGCAGGGGGTCAAGGGGGGCTCAGCATGCCCCCTCCCTTCCGCATCGCTGTGCTGGGGGCGCAGGGTGTGGGCAAGACTGCCATCGTGCAGCGCTTCCTCCACGATGACTACAGCGAGGCGCCTGTCCCGGCAACCAGCCGTGCCCGCCAGGTCCACCTGTCGGCTGCCGTGCTCAATGGCCACGTGCACAACTTGCAGATCACCGACTATCCTGCAATCACCAGTTTCCCCTGCAGCTCACTGCAGGAGTGGACAGACACCTGCTGCAGAGGAATCCGCAGCGCTCACGTCTACATCCTGGTCTATGACATCTGCTGCTTCGACAGCTTCGAATACGTCAAGACTATGCGCCAGCAGATCCTAGAGACCAGGGTGGTGGGCACAGGCGACACACCCATCCTGATTGTGGGAAACAAAAGGGACCTGCAGTGGGGGCGTGTCTTCCCCCGCCATAACGTGTCCGACCTGGTTAGGAAGAACTGGAAGTGCGGCTACGTGGAGTGTTCAGCTAAGTACAACTGGCACGTGCTGCTACTGTTCGGGGAGGCTATGCGCAGTGTGGTCTGTGCCCGCTGCAAACACGTCCATGCCACCATTCGCTTTCAACGGGCACTGAGGAACGAACGCTGCGCCCTCATGTGATTTACTCAGTGACGAGGGATGGGCACCGGAGTGGCATTGGGGGCCATTGGTACAGAAAACCTCCTTAGAAACAGCTGAGAATTATTGATGATCACTTTGACTGACTACCATGAGTGACCACGTTTCTGCCCAATGTGAAACTACAGTATTAAACACCCCTCTGTTTTGCTGCTGATATAtgatg

Function

NR:

description
ras-like protein family member 10B

GO: NA

KEGG:

id description
K07851 RASL10B; Ras-like protein family member 10B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939654.1 True 968 mRNA 0.58 3 37777987 37790177

Neighbor

gene id symbol gene type direction distance location
ska2 ska2 coding downstream 37533 37712908 ~ 37740454 (-)
LOC110539142 NA coding downstream 99697 37672182 ~ 37706371 (-)
LOC110537546 ppm1e coding downstream 110621 37603158 ~ 37667366 (-)
LOC110537540 LOC106567738 coding downstream 270749 37505206 ~ 37507238 (-)
LOC110537538 NA coding downstream 329037 37445886 ~ 37448950 (-)
LOC110537549 LOC100380745 coding upstream 12419 37802596 ~ 37886734 (-)
LOC118937921 NA coding upstream 96135 37886312 ~ 37886407 (-)
LOC110537550 LOC106567668 coding upstream 97266 37887443 ~ 37891682 (-)
LOC110537551 LOC106567669 coding upstream 109676 37899853 ~ 37922703 (-)
polr2j polr2j coding upstream 146049 37936226 ~ 37938429 (-)
G1067924 NA non-coding downstream 1604 37774312 ~ 37776383 (-)
G1067872 NA non-coding downstream 17866 37758954 ~ 37760121 (-)
G1067876 NA non-coding downstream 63554 37713943 ~ 37714433 (-)
G1067832 NA non-coding downstream 168397 37609358 ~ 37609590 (-)
G1068021 NA non-coding upstream 158186 37948363 ~ 37948581 (-)
G1068082 NA non-coding upstream 266207 38056384 ~ 38056616 (-)
G1068091 NA non-coding upstream 282678 38072855 ~ 38073098 (-)
G1068092 NA non-coding upstream 284679 38074856 ~ 38075215 (-)
G1068093 NA non-coding upstream 288963 38079140 ~ 38079979 (-)
LOC110537534 LOC106568022 other downstream 747303 37019987 ~ 37039930 (-)
G1067426 NA other downstream 840008 36937319 ~ 36937979 (-)
LOC110537579 LOC106603438 other upstream 1251343 39041272 ~ 39072520 (-)
G1069456 LOC106567699 other upstream 1318123 39108300 ~ 39108962 (-)
fkbp6 LOC106567715 other upstream 1545927 39336054 ~ 39343006 (-)
G1071725 NA other upstream 3248689 41038866 ~ 41039931 (-)
G1073009 NA other upstream 4255686 42045863 ~ 42062632 (-)

Expression


Co-expression Network