LOC110537566 (LOC106567683)


Basic Information

Item Value
gene id LOC110537566
gene name LOC106567683
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 38431429 ~ 38434087 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623704.2
GTTTGTCCCACACTTGAAATAAAAGCTTACCTACAGGTAGCCAAGAACTCATTGAATAAgcttttttccttctctctcctttttgtTCTCACAAAATGTCCTAAATATCATTGTGCCAAAGAGGACAAAGAGGAGAGGACATTGTGGAACTCTCAAGAAGTTTTTTTTACAGCAGGTTCACATTGCAGATTATAACTACTGAGAGCAAATGAAGCCACACCTGAGAAGGCATCAACACTGAACTCCCACTGCTTGCAATGCAAATAGGGTGACAACAAAGTGGAAACTACAGAGAACACACTTAAGACCAAGATGACCACCAAGAAGGCAGATGTCCAACGGAGGATCGTCTCCAAGAATGGACACAACCAAGTGCGCATTGACAACGTGGAGGGCATGGTGAAGATCTACCTCCATGACATCTGGACCACGGTGGTGGACATGAAGTGGCGCTATAAgctcaccctcttctcctccactttcaTAATGACCTGGTTCCTCTTTGGTGTCATCTTCtactttattggcatgggcaaCGGTGACTTCGAGGGTGAGTTGCTGTCCAACCACACGCCCTGTGTCATGAACGTCGCAACCCTAACCGGTGCCTTCCTCTTTTCCCTGGAGTCACAGACCACCATTGGCTACGGCTTCCGCTACATCACCGACGAGTGTCCGCTGGCCATCTTCGTCCTGCTGGTCCAGCTGGTCACCACAGGCCTGGCTGAGATCTTTGTAACTGGGGCCTTTCTGGCCAAGCTGGCGCGACCCAAAAAGCGGGCTGAGACCATCAAGTTCAGCCAGTTGGCAGTGATCTGCCGCCACAATGGTAAAGTATGTCTGATGGTGCGTGTGGCCAACTTGAGGAAGAGCCTGCTGATCCAGTGCCAGCTGATGGGCAAGCTGCTCTCACCCAATGTGACTGAGGAGGGCGAGAAGACTCTGATCCGCCAGACGGCTGTGGACTTCTACATAGACTCGTGCGGGGAGTGCCCCTTCCTAATCCTGCCCCTCACATTCTACCACGTGCTGGATGAGAGTAGCCCCCTGGCGGGGCTGACCGCCGAGAGGTTGCGGACGCGTGACTTTGAGCTGCTGGTCACCCTTAATGCCACCATGGAGTCCACGGCAGCCACTTGTCAGAGCCGCACCTCATACGTTCCCCAGGAGATCCTGTGGGACTACAAGTTCAAGCCTGTGCTCTTCAGCACCCCTGGTGGCCAGTACGTGGCTGACTTTAACTTCTTTGACAAGGTGCAGGTGAGCAGCGACCCTATACTCCCCAGCAACAACAAAGATAAGCTGAAACTAGAGGAGTACAAGAAGGAATAAGAGGTCCCTCAAACATGTTGGACACTGGTAATAAACATGACCCACAGTTACTGTCTGGAAACAATTTGTAAACACGCGTTACGGAAATATATCTGTTTTTATTTCATATAACTGCTAAACCCAATACGCATGAGTGAATGATGACACTTTTAGGCAAATAAACTCATGTTCAACATGATCAGTATGCATCTGGACAGAGTAAATTCAGGTGCAGTATATAATTAGCACATCGTTTGGATCCACAAGCCATATAATAGGAGAATATGGACATACAGGCAAAACAAGGACTGGGTCTCAGGTGCCAGTGTTTGAGTGGAACTGTGGCAGTAACTATTGCTGTACTAGAAATATTTAACCTGTACATAGGATTCCAGGAAAGAAGATTGAAGATGTTGTTTCTTTGTATCCCTCAAGTTGGATATTTTAATATATTACACAAATTTCACACTAAGAGCAGATGGGGATAGAACAAAACTTTTTTAGTGTGTAGTGCTTAAGAGCTGTGTTTTTTCTGTCTATGAATAAACCATTGACTTTGAAGAAGAGATGTTTCATATGCCATTATGAGATTGAAGGGATGTTTTTATACCCCTTCCCATTACCCCCATCCCACACTGCTCTACTCCTCATCTCTTAGGGTCGAGCCAATTAAGGGCTCTACTCAATCCGTATCGCAAAAGTTCCAAGTTACAGCGTGATTGAATTTTAAA

Function

NR:

description
ATP-sensitive inward rectifier potassium channel 15-like

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005242 inward rectifier potassium channel activity molecular_function

KEGG:

id description
K05008 KCNJ15, KIR4.2; potassium inwardly-rectifying channel subfamily J member 15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623704.2 True 2042 mRNA 0.47 2 38431429 38434087

Neighbor

gene id symbol gene type direction distance location
LOC110537564 LOC106567681 coding downstream 116807 38305193 ~ 38314622 (-)
LOC118937669 NA coding downstream 183746 38242108 ~ 38247683 (-)
nup88 LOC106567676 coding downstream 249815 38159600 ~ 38181614 (-)
LOC110537557 NA coding downstream 327255 38096980 ~ 38104174 (-)
mis12 mis12 coding downstream 368638 38057775 ~ 38062791 (-)
LOC110537568 dyrk1a coding upstream 200459 38634546 ~ 38677873 (-)
ttc3 LOC106567687 coding upstream 284442 38718529 ~ 38752891 (-)
ripply3 ripply3 coding upstream 331998 38766085 ~ 38776459 (-)
LOC110537573 LOC106567689 coding upstream 416230 38850317 ~ 38877851 (-)
LOC110537575 LOC106567692 coding upstream 558709 38992796 ~ 38996885 (-)
G1068238 NA non-coding downstream 101890 38329320 ~ 38329539 (-)
G1068235 NA non-coding downstream 103477 38327734 ~ 38327952 (-)
G1068206 NA non-coding downstream 138515 38292690 ~ 38292914 (-)
G1068203 NA non-coding downstream 141106 38290111 ~ 38290323 (-)
G1068192 NA non-coding downstream 158770 38272364 ~ 38272659 (-)
G1069285 NA non-coding upstream 421966 38856053 ~ 38910288 (-)
LOC110537576 LOC106567693 non-coding upstream 580506 39014593 ~ 39027908 (-)
G1069455 LOC106567699 non-coding upstream 672977 39107064 ~ 39108139 (-)
G1069457 NA non-coding upstream 675571 39109658 ~ 39151990 (-)
LOC110539142 NA other downstream 725058 37672182 ~ 37706371 (-)
LOC110537546 ppm1e other downstream 764175 37603158 ~ 37667366 (-)
LOC110537540 LOC106567738 other downstream 924285 37505206 ~ 37507238 (-)
LOC110537534 LOC106568022 other downstream 1400745 37019987 ~ 37039930 (-)
G1067426 NA other downstream 1493450 36937319 ~ 36937979 (-)
LOC110537579 LOC106603438 other upstream 607433 39041272 ~ 39072520 (-)
G1069456 LOC106567699 other upstream 674213 39108300 ~ 39108962 (-)
fkbp6 LOC106567715 other upstream 902017 39336054 ~ 39343006 (-)
G1071725 NA other upstream 2604779 41038866 ~ 41039931 (-)
G1073009 NA other upstream 3611776 42045863 ~ 42062632 (-)

Expression


Co-expression Network