LOC110537575 (LOC106567692)


Basic Information

Item Value
gene id LOC110537575
gene name LOC106567692
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 38992796 ~ 38996885 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623724.2
GCActagctagcgagatcctattggcgcgttgTAGTTTATATTTGCACATTTAGTGATGTGCGCAAACTCAATTCGACCTTGAACTCCTAAACAACGCAAGTGTCAAGTCTACAAATTCGTGCACTGTGTTCGTAACAGAttgtagttttgggaacagaaaaataTTTTGAGATCAGATGTTTAATCGATGACAAAATTAGCAGAATGACGGCTCAGTTTCACCTAGTTCCATACTTTCCCACTACCCGCGACTggacttcctctcactaccatatttggtggtgAGAAAACGTTTTAAACGGATGCTTCAGCTTTATAGCCACTGTGACGTGTCTGGGTTACCCCTTCTGTCTGTCGTTTAACAGTCTGTCGGAGGCAAATCAAACTAAAACCAAGCACAAACATGTCTGGACGCTCGGTTCGCGCTGAGACACGAAGCCGTGCTAAAGATGACATGAAGAAGGTCATGGCGGTCATTGAGAGGGTCAGAAGATGGGAGAAGAAATGGGTGACTGTCGGGGACACATCTTTGAGGATATTCAAATGGGTGCCAGTGGTGGATACAAAGGAAAAGGAGAAGAGTAAGGCAGTCCCGGTTGGGGCAGTCAGGGAGCTGAATTGCTTCTCCACAGATCCAGCCTCAGAAAACCCACACTCAAGTCTTTTGGATTTTCATGATGAGAACAGTAACCAGAGCTCCTTGTCTGATGTGTACCAGCCCAAAGTGAACAGCAGCAGTAACTCCAGCCCCCAGCTCAGTGAACCTCTTAGCCCGAAGAATCTGTGTGACTTCCGCACAGATGACTCCCAGCCCCCCACTCTGGGCCAGGAGATcatggaggATTCGTCATTGCCAAGTGAATTGGCTGACGAACCTCCTTTGCTGATTAAAGAGGACCTGTTGCCCCTCACTGCTCAGGAGGAGGACGAGTGTTCTGGAGCGCCACCACTGAAGAGAGTGTGTTTTGAGCAGAACTCAGTCCTGCAGAGCTCCCCCATGATGAGCTCCTCCATGACGACCTAACACACACTGCAGTTAGCATCCGGGTCGGGTCCAATTCACTTAAGGCATTTTGTTGAATCTCGTTTTGTGATTTGGAAAAATTATCGTTTTCAATGAGGACACTTCTGGTTCACGAATTGAACTCTCAACAAACTTCCtgaatttgaattgatttgaaccCGGCCCTGCTTAGCTTTTAGTCAGCGAGTTGCACGACCACCAGTCTATCCTCCGATGACTGCAATAGACACCATTTTAAGGACCACCATACTTGTTATGATGATATATTGAATTAAGTTTCTCCCTCAAAGGATTTACAAATATGTGTTTAGTTTAGCCTATTTTGTTTTGAATGGATTAACAGCCAAATACAAAATCAAAGCACCCTACCACAGATAGAACAaggagacagatatttcaccggatgtataactGTGACGCATCCatttggcgtttccactcactacccaatatggtagtgagaggaagccgaGTGGCCAGCAGTGGGAGAACATGCAACAAGATGGACTTTGGCTGACATTCTGCATATTTACTCatcaatgaaacatttgatctcaattacaattttctgttcccaaaactagaatctgttatgaacagagttgACTACGTTTTGTAGACTTTAATCTTTGCCAAAGTTGTAAAAAATGGCATTGTTTAGGAGTGCAAAGCCAAATTAagttattgcacacgcgcacttcacagagtaggcgttccctaaaaTAAATATGCAGTTGTTTGCTAGAACAGGCTAATAGGATcttgctagctcgtgcttggctctgcctaCCTCCTTTCTTGTTCTTCCCACAatgactcatttgttcccattggaaacgacaggctgtggtctatcttggtttagttatacaaATCTTTGACTCTACTACAGCACTCTACCGAAGTAGTGCAGTCAGGTAGGTTATAGATGTCTGTCCTTTTATTTTCTTGGATTTGGGAAATACCGTCTTCTGTCTCCAAAATGTAACTTTTCGCATAATCTATTTGAATGCAAAATAATGATGGGCCATTTATGAAGTAATAGGTGAATTCAGCTATGGTTAGTGTTGAATGGTTCAAGTAGGATTGGCCTTATTGTGAGTGCAGTTTCATATTGTGCCATTGACACTTGTTACTCAATGCTAGCTGTCAGGATCTTTGTCACAGCAACAGTGAAAGATAAAGTTGACAATCGGCACTGCCAATTTCTAAATGAAGTATCAACTCCGTCCATCCGGGGCACACTTTTGAGAAAATCAAACACACTCTGTGCCTAAATCTAAGTTTAACATTGGAGAATGTTTCAACATTACaagtactgtatgtgctgttttTGGTATGAACATCACATTCACTGAATGAAGAGTTAATTTAAATGACTAGGTCCTTATGTTTTGTAATTTATCTCTTAAAGATGTTGACTTAGTTATTTAAGTTAGGGTTCATTTGTAAAATGAACACCCATTGTTTTCCTCAGTCTAAAATGGTATGTCTTGAGCTATTGTCCCTAGTAACCCAAGGAAGCACTTGTATTTCTCAGATATTGTTTTATGTCATGTTTTACTTGAGTGAAATTAGGAAATTATTTTATCAGGTTAGCGTGTACACTGAAAATGTGATGTTATTTGGGAGTGACTATAATACTTAAATAGTAACCAATTATATTTattatagaaaatatatttttttctctgacaatctaaaacaattgcacacATTTGGCAACTGGGGCACATTCAATGGTTTGCCATTTATGAAAGAAATGCTGTTAAATATGGGAGGCAAAAAGGTAACTCCCATGATGTCACTAGTTATTACCAATTTATAACCATTACAATTTTCAGTCTTATTTCATAGTACTGTCAGTCTCTTGATAAGACATGATTATTTGCAGGGATGCCAGTATGTTGAATGGGCCACTAAAATGAAGGCATTTACAATGTGATGACTTCTGTATCCACATTTTAATGACCACCTTGCAGATTCATTTGGAGATGGTAGGCTTATTCTGCTAatgcattattttatttttcaagaAGGTCGTTTGGAAAAGAGTTTGTACTTTGTATTTTATTGTAATTTTCCAAGTAAAAATGATTTCATAAAGGA

Function

NR:

description
B-cell CLL/lymphoma 7 protein family member B-A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623724.2 True 3134 mRNA 0.40 6 38992796 38996885

Neighbor

gene id symbol gene type direction distance location
LOC110537573 LOC106567689 coding downstream 114945 38850317 ~ 38877851 (-)
ripply3 ripply3 coding downstream 225240 38766085 ~ 38776459 (-)
ttc3 LOC106567687 coding downstream 239905 38718529 ~ 38752891 (-)
LOC110537568 dyrk1a coding downstream 314923 38634546 ~ 38677873 (-)
LOC110537566 LOC106567683 coding downstream 558709 38431429 ~ 38434087 (-)
LOC110537578 LOC106567694 coding upstream 497 38997382 ~ 39006119 (-)
LOC110537576 LOC106567693 coding upstream 18642 39014593 ~ 39027908 (-)
LOC110537579 LOC106603438 coding upstream 44387 39041272 ~ 39072520 (-)
LOC110537580 LOC106567695 coding upstream 76363 39073248 ~ 39077590 (-)
LOC110537583 LOC106567696 coding upstream 80755 39077640 ~ 39085899 (-)
G1069285 NA non-coding downstream 82508 38856053 ~ 38910288 (-)
G1068238 NA non-coding downstream 663257 38329320 ~ 38329539 (-)
G1068235 NA non-coding downstream 664844 38327734 ~ 38327952 (-)
G1068206 NA non-coding downstream 699882 38292690 ~ 38292914 (-)
G1069455 LOC106567699 non-coding upstream 110179 39107064 ~ 39108139 (-)
G1069457 NA non-coding upstream 112773 39109658 ~ 39151990 (-)
G1069462 NA non-coding upstream 116947 39113832 ~ 39114452 (-)
G1069480 NA non-coding upstream 127345 39124230 ~ 39185219 (-)
LOC110539142 NA other downstream 1286425 37672182 ~ 37706371 (-)
LOC110537546 ppm1e other downstream 1325542 37603158 ~ 37667366 (-)
LOC110537540 LOC106567738 other downstream 1485652 37505206 ~ 37507238 (-)
LOC110537534 LOC106568022 other downstream 1962112 37019987 ~ 37039930 (-)
G1067426 NA other downstream 2054817 36937319 ~ 36937979 (-)
G1069456 LOC106567699 other upstream 111415 39108300 ~ 39108962 (-)
fkbp6 LOC106567715 other upstream 339219 39336054 ~ 39343006 (-)
G1071725 NA other upstream 2041981 41038866 ~ 41039931 (-)
G1073009 NA other upstream 3048978 42045863 ~ 42062632 (-)

Expression


Co-expression Network