Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110537593 |
| gene name | LOC106567711 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 39216300 ~ 39274017 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein cypCar_00010488 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036937547.1 | False | 1936 | mRNA | 0.50 | 15 | 39216300 | 39274017 |
| XR_005034976.1 | True | 2729 | mRNA | 0.47 | 10 | 39216304 | 39248460 |
39,200,000
39,210,000
39,220,000
39,230,000
39,240,000
39,250,000
39,260,000
39,270,000
39,280,000
39,290,000
39,300,000
39,310,000
39,320,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937670 | NA | coding | upstream | 32716 | 39182142 ~ 39183584 (+) |
| LOC110537591 | NA | coding | upstream | 50665 | 39163404 ~ 39165635 (+) |
| LOC110537590 | mks1 | coding | upstream | 59124 | 39154853 ~ 39157176 (+) |
| LOC110537585 | NA | coding | upstream | 76391 | 39137089 ~ 39139909 (+) |
| LOC110537584 | LOC106567699 | coding | upstream | 101809 | 39093933 ~ 39114491 (+) |
| LOC118937671 | NA | coding | downstream | 84947 | 39358964 ~ 39362026 (+) |
| LOC110538893 | rfc2 | coding | downstream | 88980 | 39362997 ~ 39371358 (+) |
| LOC110537603 | LOC106567719 | coding | downstream | 106887 | 39380904 ~ 39401720 (+) |
| htr3b | LOC106567726 | coding | downstream | 272030 | 39546047 ~ 39555571 (+) |
| htr3a | LOC106567725 | coding | downstream | 282672 | 39556689 ~ 39563770 (+) |
| LOC110511907 | LOC106567702 | non-coding | upstream | 123 | 39119925 ~ 39265901 (+) |
| G1068674 | NA | non-coding | upstream | 12830 | 39171111 ~ 39203470 (+) |
| G1068709 | NA | non-coding | upstream | 55841 | 39132811 ~ 39160459 (+) |
| G1068644 | NA | non-coding | upstream | 172858 | 39041658 ~ 39043442 (+) |
| G1068770 | NA | non-coding | downstream | 53065 | 39327082 ~ 39339590 (+) |
| G1068797 | NA | non-coding | downstream | 140837 | 39414854 ~ 39415056 (+) |
| G1068799 | NA | non-coding | downstream | 143410 | 39417427 ~ 39417633 (+) |
| G1068804 | NA | non-coding | downstream | 148943 | 39422960 ~ 39423161 (+) |
| G1068853 | NA | non-coding | downstream | 230206 | 39504223 ~ 39504756 (+) |
| styxl1 | styxl1 | other | upstream | 126357 | 39077007 ~ 39090045 (+) |
| prkrip1 | LOC106567678 | other | upstream | 974927 | 38231737 ~ 38241376 (+) |
| G1067321 | LOC106567676 | other | upstream | 1047352 | 38168337 ~ 38168948 (+) |
| G1067221 | NA | other | upstream | 1277024 | 37938832 ~ 37939276 (+) |
| G1067156 | LOC100380745 | other | upstream | 1350825 | 37854888 ~ 37865475 (+) |
| G1070479 | NA | other | downstream | 1018435 | 40292452 ~ 40292734 (+) |
| G1071144 | NA | other | downstream | 1840561 | 41114578 ~ 41114957 (+) |
| G1071159 | NA | other | downstream | 1863419 | 41137436 ~ 41137868 (+) |
| G1072789 | NA | other | downstream | 2923033 | 42197050 ~ 42216163 (+) |
| G1074265 | NA | other | downstream | 4571150 | 43845167 ~ 43845968 (+) |
