LOC110537596


Basic Information

Item Value
gene id LOC110537596
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 39240657 ~ 39245631 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034977.1
TATAGTTCATACTGGTGGTCCTACCCATTACCCACTTCACTCCATTAACCCTAAACTTGCTGCTCACATGGTGGTTTGTCTAAATGTATTTGACTTTAGGTTAGTTAAGGTTAAGAAGGTAAAGATTGTGTTTTGCTGTGTTGGGAGCACTAGTGGCAATGCTGCCTCACCCAGATCACACATTaccctatatacatatatattgtaGCCAGCTTAACCCAACACTTACCACCTTCTGATCTCTTGGTGTAATGAATAAGGTTGCTAGTCGCTGGACCGGGGTTCGAGGCCCAGTTGGAGCTACCCCCAAGTTTGTTACATTGGTATCAGAAGTGGGATAGTGCCTGTGAAGCCATCAAAGATGTGTGTACACGTGAGAGACTGTGGGAGAAATTAGGTACATATATGGATAAATATACTGTCCTATATAAAAGAGGgatgcatttgccattctggtaaggtacattgtctattgtataggacaggaagccagagtGGGGCCATGGGAGAGGGCAACACCTAGGGCAGCTGGACATACAAAGGTCagaggttgtctaaggagggggtcagccaaagGACCAATTGATGGATCACAGACATCAATCACAACACAGGAGACAAGTCTGTTTGATCTTAGACAACCATATGAAGAGAAGGCGACCAGAACAGCTAGGCACCCTAAAGCTAAAGGAGATGAAAGACACCAAAAGGGACACATGGAGTTAATTACAGGGTATGAACACAGGCCACAGGAAAGGGGAATGTATAGTATTTTTAGTATAGCTGAGCATGCTAAAAACAGAAGAGACACAGTCTGCTGACCCTAGATAACACACAAACAGGAGAACGCATTAAGCTGAGTGAAGGGTCAAAGCAAGGGTCTTGTCACCATTAGGATCTAATGGAAAGCAGATGGGGGCGTTATTGGGCTGAACAAGCAGGAAGCACGGATTGGGATGTAACTTAATTTGCATATGGGAGGGACTTATATGGTAGGTGTATAACTCAGAGCGAGggctctgaaaaagtgtgtgtgttccgcggaccgctCCGGCTTATGATACTGTTGTATTAAAAGTCTATATTGATTTTCACAAAGTTCTTGGTTGTGTCATATTTGAACCGATTTGCCACTACAGACTTGGCGAGCTTGCCAGGAGAATTAGGGACTGAATAACGTTCTTGGCTGGCAGCGGGATCTTTGGACGATCTGGGCAAACAAGGGTGGCCACCCAGCTAAGGTAAGAcaacagtgaaatgtttgtgTAGATCGCTTCAGAGATCCTGCCTCAGCAAGAGGAGCGTcaagtaggtctctctctctcaaatttccTAAAAACTATAGAAACGAAATAACTTTTTGAAATTCAATGAatttgcatgcatgtgtgtaagCTTGGAAATTGTATAATGAATGTGCATGCGTGTCTAGTGAGTAAGTAGGTGGGGGCTGTGAACTTCGCTGGTGTCGGGTGTGTTATTCGGCATGTTGGAGCTGGGTTTGGGCGCAGGGCTACAGCTACCTGCTTATAAGGTTTGAATAAAATAAGTAGTTATAGAAGTCCTGCGATACCGCTTCAAAATATTTACCAGAAGGTCAAAATTTCTCTGGTCAAAATGTCATTGGAAACTGTAGTACTGAGGAAAGCAGTTAGAGATATTTTGGCCACTAAAAATCTTAGTATCTGGTTAAGGCTATAACTGGAGTTCCGGATAAGTGAGGCCAGCTCATGTGTATTCTTGGCCTATATGCGATAGTGGGTTTCCTTTGGAAGGGTTTTTCAGTTCAGTTTCAGATTGGGTATGCAGAAGGATGGAAGTGTTTTTGGCCTATAGGAGATAGTGGATTTCCCTTGGGAGGGTTTTTCAGTTCAGTTTCAGATTGGGTATGCAGAAGGATGGAagtgtttttgaaaatgtatttaagttGTTTCTAAAGAAAAGGGAGTGAAAACATTTTAATGGTGTCAAATGCCCTGAACCCTAAGAATTTCCATTGAAGACTGATCAACTTCACTAGAACAAGTGGGATTTAATTATAAAATGATTGAGAAACACCAGTTTCTATTCAAAGTGTAGAATCACAGAAGATGAAGAGTTGTAATCTTGAATTGACTAGTTATTCAAAtaggtttatttttatttaacatggGGTTATAGGAGAACATATCAGTTCCCTGGGGTTATGGTCTTTGGGTAAATACAAAATGTGCTTTGTTCATTCTACATATAAAATGGAAATATATGTAAACAAGGGATAACAGTTACTCCAAATAGGTTATTGGAGTGGGGGTTTATGCAAGGGTTATGATGATAACTACATAATCTGTAACTCATCTGAGAGATCGCCAGTAGAATAAGGGAGTTATCATGGAAATGTAATGTCAGAATGCATTAATGCTTGGGAGAGACTATCATAACACCAAGTGGGTGTGAAACTCAAACCCACCCTACTGGCTGAATAGTGTGGGACAACTGTGTCTGATGACCTGTGAACTGTATCTGGAATGATATGTACTGGGAGAAGAAAGACTAAAGGGGATTGGGATAATGACCTTTTATTACCAGGCCACTCATGACAGAAAAACAGAGGTAAAAGGGTGCATGGTAAATatagatattactggtactaAAAGTTTTTAGTATAATGTTAATTATTAAAGGGAGATGTATTGAATTGAGTAGGTCAAATTTGAGTTAAAGTAAACACTAAGGACTGTTATCCTGAATATTGGATTGGATAATTTATAAACAACATTTAGTTATGTTTTGAATATAGGACTGTTTAAATTTACTAGGCCTAGGGAAGCTCTGGAAACCAATCCTGAGACAGGTTGATTGACAGAACTTGCAGAATATTAGATTAAAGttttttgtttcttttatttTACAATACCATTGTAATTGGAGTAATACATTGGAATGACATAAGTAATTGAATAAAAAGTATAGTCTGTTGTGTGATAACACCCAAGGATGAAGAAGACATTACAAATAGTGGTAATTTATTGCAAATATGCAGTTATTATAATTTACTTTACCATTTTTCTTGTTTGGTCAATGTATTTTTGTTTTGAGGAAAATAAGAGTGTATATTTTTCCTGAGGAGGGACTGATATAAATTGACTAAAAATGATTTGAGAATGTTTAAGTATGTATCAAACTATGGAAGGAAATTAGGAGTAGTGACttatgtgttatgggttagaaaaACTGTAACTACATTGGGGGCTCATACATGAAGGTTATGGTAGCGGAGGGGTGTTATTTCTAGAAACAATGTATATTAATAGACAAGATCATTCACAGAAAAGGAAAGACAGTTGGTCTTGTAAAAATATAGGCACAATTCTAAAAGTAAATAGAACATTACACATACCTAGATTATGGTAAAAATAATAAGTAGTGGCATTTTGAACACTAGAGCAAAAGTTTAAGAAGCTTAGGATTTAGTTTTGTTAGGATTGGATATTCTTTCAACTGGAAGACACTTGACTGATTACATGTTATTCTTGCAGCAGTTACGGTAGGGACCATAATTTGGCTATCATTATGAATATTTTTGTGGCAAGAGGCCAGGTATTTAAGACAGaatgtttacatagggctgttatTTAAAAATTAAGATTTAGTGATCTTGCTCTAAGAAGAAAGTCTGTTGTCAGGAAATAACCCATGAGTTAGTATGTATGTTCCCAGGAAAAGACGCCAGATGGAAGGGCATGGGCTGAATTCTGGAAACTGAGTGTACATCAAGATACACCGGGCTGGGGATATACTTCTTACAGCACCTGCAGTGGTAAAGATTGTCATGTCTCTCTATGATGGGTGCATAAGTTTCACAAGAAGTAAGGTCCAGCTGAATAATGGGTGAGCTTGAAAACACCATGACAGAGgatgtgaaacaaaacaaaagagagagactagattcTAATGTAGACATACTGGGTTGAGTTTGGGggttatttgttttatttgataatGTATCATGTGAATAAGGATATATGTTAGGGTAGTTGTACTCTAAACCACATGTTGAAGGCTCAATGTGGAAGCCCATTCCGTGTTGAATTACTTTAAGAAGGAATAATGTTGATTAAGGTTATGCACATGTTTATCAGTTGAAACAGAGCAGATGGGGAACTAAGTAAAAAATGACATGGTTTGGGAACACCTCTCAGAACCTGCGGCCGAAAGGGGAAGACTGGATGAAAGCACGAGGAAGCCAATTAGGGCCTCCATTTTTGTGGAGTCCAGCAGAAAAGTATCCTGGAGGCATAgagtcagTCTTATGTTTAGGAAACCAGATGGAGAAGGGTTCTCCAGCTTCAGCTGGAATGTCAGTTTGTGTGATGAGTGATGGAAGTAAGAGAATGTATGGTGTAATCATAGAACAGAGGCCATAAGTCTCTTAAGTATGAATGCCCCACAGAAAGAAGGCAGAAATCTGAACCAGGATGAGAGGTTCCACATCTGATGATCCAAGGGGACCAGAAGGATCTCTCCCAGTGATACCAGGAGATCGAGTCTACGTTTGAGTGTTCCGAAGGAAGTGGGATCAGCCGAGGAGGGAAGGACCCTACGAGGTGGCAACAGCCACAAACACGGCCGTCCAAGTGAAAGGAAGCAAGACGTGGTATCATCTAAACCACTGCACCCCGAGTCCCGACGGAGAGAAGGACACAACCATACAGAGATGAGGACACAGAGGATGCTGATTCACCAGAAGGGACCCCGGAGGGAGCAGGAGCAGCGGAATCGATCAAAGCGCCGGGGAGGAATCAAGAAAATGGCAGACCAGATACAACGAGTGCATCGGCTAACACACTCAGAAGAACCGACCAGGGAAAAAGAGCCTGAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034977.1 True 4863 mRNA 0.40 2 39240657 39245631

Neighbor

gene id symbol gene type direction distance location
LOC110537583 LOC106567696 coding downstream 154758 39077640 ~ 39085899 (-)
LOC110537580 LOC106567695 coding downstream 163067 39073248 ~ 39077590 (-)
LOC110537579 LOC106603438 coding downstream 168137 39041272 ~ 39072520 (-)
LOC110537576 LOC106567693 coding downstream 212749 39014593 ~ 39027908 (-)
LOC110537578 LOC106567694 coding downstream 234538 38997382 ~ 39006119 (-)
LOC110537598 LOC106567714 coding upstream 63585 39309216 ~ 39312123 (-)
fkbp6 LOC106567715 coding upstream 90423 39336054 ~ 39343006 (-)
zgc:171740 LOC106567716 coding upstream 97984 39343615 ~ 39358852 (-)
si:dkey-183i3.6 LOC106567717 coding upstream 125563 39371194 ~ 39377049 (-)
si:dkey-183i3.5 LOC106567720 coding upstream 153365 39398996 ~ 39405263 (-)
G1069468 NA non-coding downstream 140 39232028 ~ 39240517 (-)
G1069469 NA non-coding downstream 4094 39236092 ~ 39236563 (-)
G1069499 NA non-coding downstream 16493 39159168 ~ 39224164 (-)
G1069497 NA non-coding downstream 22582 39184748 ~ 39218075 (-)
G1069495 NA non-coding downstream 26812 39149551 ~ 39213845 (-)
G1069533 NA non-coding upstream 36027 39281658 ~ 39286252 (-)
G1069540 NA non-coding upstream 42322 39287953 ~ 39288179 (-)
G1069543 NA non-coding upstream 47813 39293444 ~ 39293906 (-)
G1069544 NA non-coding upstream 49994 39295625 ~ 39295859 (-)
G1069600 LOC106567719 non-coding upstream 149950 39395581 ~ 39396334 (-)
G1069456 LOC106567699 other downstream 131695 39108300 ~ 39108962 (-)
LOC110539142 NA other downstream 1534286 37672182 ~ 37706371 (-)
LOC110537546 ppm1e other downstream 1573403 37603158 ~ 37667366 (-)
LOC110537540 LOC106567738 other downstream 1733513 37505206 ~ 37507238 (-)
G1071725 NA other upstream 1793235 41038866 ~ 41039931 (-)
G1073009 NA other upstream 2800232 42045863 ~ 42062632 (-)
G1074731 NA other upstream 3458372 42704003 ~ 42713923 (-)
G1075335 NA other upstream 4318154 43563785 ~ 43564240 (-)

Expression


Co-expression Network