LOC110537603 (LOC106567719)


Basic Information

Item Value
gene id LOC110537603
gene name LOC106567719
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 39380904 ~ 39401720 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036937554.1
agtaACATTTTAAGaaggtttatgactttgtgactgtggtaactagtgatttTATAACGTGCTTTTTCTCAAAGTTaccgggatgtcacgtgtcctacttatatcaaTACAATCGTAACAACCGAATCATTACGAAACTTCGATTCAATCAAATAAGTAACACGTAGCAAATACGTCATTATATTGTTATGAACGAATTTCGACACTCCACGACCTCCATATAAAAACCCATCGCTTGACGACCgaatacaatttttaaaaaaccacctgctggagaagacagattttggcCCCAGTTATGCCTCTTGCTTGGCCTTTTCCTCTTATAAAAAgcgatacagcttttgtcaaattaactaaaaaatatatatattttaggtaACTCCATTCGTTTCCCCAACGTTAACCTGTTACGTCTACTCAAAACCCTTATCTCCCTGTCACATGGCATGAATAAGATGCATGTAGACATGGGGGAGATAGAAAATGAACCAGTGCGACCGAAAATTACTGATGCCAAGGGTATTCTCCAACAGAACCGCGAGTTCCTGGACTTCTTCTGGGATATCGCTAAACCTGAACAAGAGATACGGCTGAAGGCCATTGAAAATCTCATACAATATCTGAAGACTAGTGAAAAGACAGATGAGTTGACATACACCCTGAAGAGACTGGTGGATGGCTTGGCACACACTAGAGAGGCTGCCCGGCCAGGCTTCAGTTTGGCTTTGGGACAGGTACTGAGCGTGTTTGAGGAGATACCTCTGCGTACAGCCTTTGATCAAATCAAAGAGAAGCACAACTTGGCGAAAGTGAAAAAGAAACTCATCAGAAATGCTGCTTTTGGGAACTTCTTTGGTGTGCTCGCCCTGTCTCAGTCCACACGCCTTCCAAAGgagcCTCAGGTGGTGCTGGAGTGTGTCCAGCTCCTCCAGAGCCTATCGCAGTATAGAGAACACCTGCGGGACCTGCCCAGGAAGACCATGGTGGACATCCTGTCTGAGACGTCAGAGGAGGTGTTTGAGGAGGTGCTGCTGGGAGCCCTGCAGACAGACCTGTCCTCTGCCTTCAGCACCCCTGAGCAGCTGCAGCTCCTCCTGGTGGCCATGCAGAAGTTCCCCCAGGTGCTCAAGCCCAAGAAGCTGAAGAAGCTGCTGGGCACCTCCACCATCATAACCATGGACAATATCCCTAAGTTGACAGATGTACTGAAGATGGCGGCCCGCTCAGTCAAGAAGGACCGCCTGCTGCCTGCGGTGGCTCTGGACCTGCTGCAGATCTCTCTGAGGGAGGACAACTTTGAGCTCTTCTGGAGGGAGACCATCATTAACGGCATGCTGAAAGACCAGCCGGGGCCCACACATTACCTGAGCTACCGGCTGTTGGGTAGTGCCCTGCCCTTGTTGACCCTGGCCCAGCTGAAACAGGTGTTAAATGGAGAGGTGATGAGGACCTACGGGGAACACGTGGTCTCTGCCCAGCTCCCAGACCGCTTTAAGTTTGCCCCCGAGATGGAGACGTACGTTGGCGACTTCCTGCAGGGCTGCGATGACCCGGAGAAGCAGCTGGCGGTGATGGTGGCCTTCTCCCTGCTCACAAACCAGGGCTACCCTGTGGTGCCCTCCTTCTGGAGGGTTGTGCAGCACCTGCAGCCGACCGCACTGCAGAGCTACGTGGACTGGCTCAAAGACATGTTCCTCAACCCCCGGCTGGACAGCTGCCTGGACTTCAGCACCCGCAGGCAGAAGGAGAACCAGGAGGGCGGAATCCAGAGAGAGAACTGTATATTCCGCCTGAGGAAGTGGATCATTCCACGCCTAACCTCCATCGCCGAGAACAaccaggtgaagagagaggaggctCTAGTGATGGATGTAGCCAGGTTTGTCTTTTTCCATGCGTTCTTCAATTCTAAGAAGGCCACCCCAGACATACTTGAGACAGAAGCCACCCTGTCAGTGCCCCTGGATGAGAAGACCAGAGCCATCATCATAAACTCCTTCTTTGGATTGCTGCAGCACATCAACCACCTGCCTTTGCTGGGCGACTCCCCTGAGGTGGCAGCCCGCAACCAGAGGCACATGCAGGGTGTGATGGCTGACGGCTCCATGTGGATCTTCTGTCTGGTGCGGTACGCTGACACCCTGCTCAACCAGCCTAAGTACGTTAAGAGCACCCAGCCCTTCAGTCCTGAGCAGAGACAGGCCTGGGACAGTATGCTGGCGTCAGTGGGGACTCTAATGAAGAAATCTAAGAAAGGCCAGACTCCAGAGACCTCTGCTTTCCAACAACTCTTCCTGCTGGTTGGCATTCACCTCTTCAAGGCTCCAGAGGATTTGGTAGACCTGATGCAGGATCTGCAGAACTGCATGGAAAAAGCCCAAGAGAAGAAGTCCAAGAAGAAGAAGGCGGTAACCGGTtctgcagcagcaggagaggaggagcccCACtgggctgaggtggtggtggacaTCCTGCTCTCACTCCTGTCCCAGCCCAGTAGACACATCCGCCACGTCTGCAGGACTGTCTTCTCCAACATCTGTCCCCACGTCACCGCCAGAGCCCTCACCAGCCTAGAGAATACTGTTCTGGACCCAGATAAAGATGAGGAGGACAGTTCCATCGTGGTGACGGATGATAAAGACTCTGACAAAATAAAGAAGAAAGACAAAAAAAAGAGAGGCGAGGATGAAGACGACGAAGAGATGAATGAGGATGAGTCGGATGCATCAGACGACGACTCTGATGAGGGTGAAGATGAGGCCATGGAGGAGGGGAGCGAGGTGGATCAGAACTTCCGCATTGAGCTGATGAAGGTCCTACAGAACCAGGGTGCTCTGGCCACTGAAGAGGACGGCAGCGATGATTACGAGCTGGACGATGAAGCCATGATGAAGCTGGACGGCAGCATCGCAGGACTGTTCCTTGAACAGAAGAAGAAGATGCAGGCCAAGAAGGATGAGAAGGACAAGCTAAAAAAGGAAAAGACCCTCGTCAGAGACTTCAAGATCAAGGTGCTGGACCTGGTGGAGGTGTTCCTGGCCAGGCAGGGCAGCAGCCCTCTGGTGCTGGGCATGGTGGAGCCCCTGCTCAGCGTCATCGAGAGCGGCATGAGCTCCGAGAGCGACCAGCAGGAGCAGGACTTCCTCCGCAAGGCCGCAGACATCTTCAAGAACCAGCTGTGCCGTGCCAAGCAGTACTGTAAGACCGTGGGCAACAGACAGGGGGAGCTCCACGACCTGCTGGAGAAACTCATGACCAAAACCCAGAAGCTGTCTGACTCCTCAGTGTCACTCTACTTCTTCAGTGCATCTCTGTACCTGGTCAAGGTGCTGAGAGGGGGGTGCCCGGGGCCTCAGCAGATGCTGAGGTTCATGGGTAACGTGGACGTGGAGAGGGTGTCGGCCATCTTTAAAGGGGCGCTCTGCTCCTTCATGACGCGCAGGAAAAGCCCTCTGTCAGGCCTAATGTTTGTCGACCTCTTCACCCGCTTCCCTGTTCTGTGTGTAAACCTGTTGGTGACCGCAGTGGAACACATCACAACAGGAGTCAGAGAACACCAACAGAGCCAGGCCAGTGCCATGGTGCTGCGGGGGCTGCAGAGCAGGGAGGTACAGCAGCTGTTAGCAGGCAACCCCTGGGCAGGGCTGCTTCAGCAGGCGGTGGGCCGTGTGGCAGCGAGTCTGGAGACTGTAGTTGAGACTGGTAAGAACAAGGTGGTCCAGGAGAAGTTGGTCAAAGCCCTGGAGCTCAGTCTCTTCCTGGTTAAAACTGTCAACGAGCAGAAGCTGTCTGTGGATCTGGAGCCCCTCGAAAAGGTTATTCAGTCCATGAGAGAGGTTCTGGGCTTCAGGAAGACTGGACAGATGGAGGACACCTACTGGGCTGTTATGAAACATTTTGGAGTCATAAAGCCCAAAAGGGACAGAACCAGGAAAACCAAAGACCAGGCTGAGCCGACCGCTCCCAAGAAGAAGAAAGGATTCCTGCCGGAGACCAAGAAGAGAAAGAACCGCAAGAAGCAACTGCCTGTCTCTGAGCAGGGGGCAGCAGATGCCAACACAGTCCCCTTGGGGAAACCAGAGGGAGGAAAGAAGAAAATAAACAAAATCAAGAGGAAACtaccaggaggaggagagacacctGTACAGGGTCCGACCAAGAAGGCCAAGACGACATAGCCTGAAGGCAAACAGAAGAAGGGAGGCAGAGGAGAATAAAGTGGACTATATGTGTGTACttaggccagagagagagagagagcctgtggTTGTGAAGATGGGGTCTCATGCTCTGGTTTTGTAACTTTGCTCTACGAAGAGCTATTGATATCCTTTTCATACAAAGGAAGGGCGAGGTTTGTTTGTGGTCTTAGGCTGTATGTTCCCTTTGCGTCCCTACTCCATCCCAACACACCAGTGTGAATCTTATGCAAAATTCTGGAGTGTTCATAAGCCTCTGAACTGATAAGTATTCAAATAATAATTGGTCATTGCGTTGTCTATGCGCCATTTTCCTTGCATGCGTTCTCTGCGAACAAGGGAGCATAGTCAGCTTGAATCCAGGCCTTGGGGATTATGCTAGTAGACCTCAAGCCGATTGAATGTGTTGCACATGGTGAAATAACACTGCTTTTATTGATATTAAACATGTTACATTATGGCAAGTCACACAACAGAATCTGAGACTGTTGATCTTTCTTAGTAATTCTGCTAAAACAGGGTTCCATCTCAATGTAGGCAGATGGAGATTCTCTGGTCGGTCCTGTTTGTCCTCAGTACACTGTTGAAGAGACTGGAAGGGAAAGAGTGGTCCAATGAGGAATTGTCTGCGTTGCACCCATAGAGAAACTCATCTTTATCTGTCCCATTAGtcttttttaaatttaacctttaCCTTGGCAAgccggttaagaacaaattcttatttacaatgacagcctaccaaaaggccacGGGATTAAAAATACATGACCTAAGGCAACTGCCAACACCATTGAGgcaatccattttaaaatagcaCGATTGGCTGAGCCCTCcgccaatgaagttggaagtcccatTATCTATGGTTGAATCTCAGAAGGTAAAGGGACAATACACTCCCAAATTTAACTTATTTTTAGACCTCTATGATGAGTCCATGTCCCAAGCAATAAGTTGTGTAGACCCTGCCATTTAATTTAttatttcaacctttatttaactaggcaagtcagttaagaataaattcttattttcaatgatgggttaactgccttgttcaggggcagaacgacagatttttatcttgccacctttcggttactcgtccaacgctcaaaccactaggctacctgccgccccaacccaAATAAATTCAAAGACACGTACAACAAATCTGGAAATACCATGGTGCTTTTCCATTCATTTTAGCTTGTGGATGGCCTGTGACATGGACTTATCTTGACATTGTGATATTTTGGAGTGTGATATTCCTTTAAGATGGCGCCAGTAATAGTATCGTTTTAAAGGAGGCATTACAGATAAAAGTAAAACTAGTTCATAGAGATGGGAGCTGTACTCACGTCCACTGCTGCTCAGGCTGGAGGACATGTAGCTGCTCCCGCCTCCGAAGGACCCCCCGCCTCCGAAGGATCCCCCGCCTCCGAaagaccctccacctcctcctaacCCCAGACCTCCTCCAAAACCTCCAAAGCCACTGCCCAGACCCCCTCCAAAGCCTCCTCCTAGGCCTCCGCCTATTCTGTAGCCACCGCCCAGACCCATGCCGccgccgcctcctcctcctcccagaccCATGCCGccgccgcctcctcctcctcccagacccagacccatgccgccgccgccgccgccgCCTCCTCCTCCCAGGGCCAGGCCagccccacctccccctcctccaatgGCAGTCTTAGACATGTGCACGGTCACGCCGCCTCCTGACCTCAGTCTGAAACCATATTCATCACAAATACATGACTATCATAGAGACGGGCGTAGAACTTCAGAGAGCATCAATCAGCACTTATATGGGTGAACATCTGGATGATGTATGAGACCCTACTCTCTTACCTGCTCTCCTCGCTGTCCAGAAGCTTCTTGTATGCAGTGATCTCAACATCTAGAGACATTTTACTGGCCAGGAGTTCCTGGTACTCTTGACCATAGTGTGTTATTTGCTGTAAGAAGAGCATGATTCATGGGTTATGCTGCACCTAGAAACTGCATGTGAAAGTGGCTCATAGGAGTTGTATTTTTTACTGGTGTATACTTGTGGAGGACTCTGTACCCCATCCTTACCTTTCTGATGTCATCCAGCTGCAACTTGAGGGTCAGCACCTGCTCCTGATAGGTCTCTGTGTGGGAGCTGGAGTGGGACTCTGCCTCATCCACCTGAGATTCCATCTGGATGTTCTACAACGGGAGAGATCAGTCCTGCGTATTAAAATACTGTGGCGAGCATTAGGTTGTCAGGAGATAGGAGTGGGATACTTACCCTCATACTGTCATTTATGAAATCAatgaaacattttatttgatgCTGTATAATTTCAGGGTAGACAAGGTCATGTTCCTACCAGGGTCTTGAGTCTGTCGATCTCCCTCTGTACTGAGTCGATCTGCAGTTTGTACATGCGCAGCTCCTCTTTGGTTTGGGTCAGAGTCTGGGTACTGGGCTGGGATGTCATGGACATCATGGAGAGCTGGGGTTTGAAATAAGAAAaaggaggttacattttcatggtgccttcactAGTCTTAGTCTACGCAAACTTGAGAAATAAACATAAGATTTGGGGTTGGATGCTGGAAGGCAATGTAGGCTAAAATAGTGTATTCTGAGTGCAATGCTAAGAACATCCACTTGGGGGAGACTGCAACACAGATAAGAATGAGAGATAATGAATGTTATGGTGTTTGCAAAACAAGTAATCATTTTTGCAACTAGTTATCGTTAGATAATGCCTGACAGACTTGAGATGATTATGTTAATACAATGTAAAGTTGATGGGCCAATAGACTGGTTGACAAAATGCAGACTAGATACTGTCGGTCGCTGAAGGGAACATACACTGTCCTGCACAGAAACAAGGGCGTCCTGCTTGCTGCGCTGGGCCAGGGCTTCATAGTGGGACTTGACGTCCGACAGGGCAGAGGTCAGGTCCTGGGCTTGGGCTGCGTTGTCCACCGAGATGGAGAAGGCTGACCTCACACTGCCCGTCATGATGTTCCTCACCTCCTTCACTTTCTACAACACAAAGCAAATGTGTTATGTCTAATGTGCAATTGTTTTAGTCTTCCTTGTGGCTATGGCAACATAATACAGCTTTTAAAATA

Function

NR:

description
myb-binding protein 1A-like protein isoform X1

GO: NA

KEGG:

id description
K02331 POL5, MYBBP1A; DNA polymerase phi

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036937554.1 True 7346 mRNA 0.50 26 39380904 39401720

Neighbor

gene id symbol gene type direction distance location
LOC110538893 rfc2 coding upstream 9546 39362997 ~ 39371358 (+)
LOC118937671 NA coding upstream 18878 39358964 ~ 39362026 (+)
mks1 mks1 coding upstream 98450 39266156 ~ 39282454 (+)
LOC110537593 LOC106567711 coding upstream 106887 39216300 ~ 39274017 (+)
LOC118937670 NA coding upstream 197320 39182142 ~ 39183584 (+)
htr3b LOC106567726 coding downstream 144327 39546047 ~ 39555571 (+)
htr3a LOC106567725 coding downstream 154969 39556689 ~ 39563770 (+)
LOC118937980 NA coding downstream 773631 40175351 ~ 40175541 (+)
cadm1a LOC106567730 coding downstream 1109438 40511158 ~ 40938098 (+)
LOC110539145 NA coding downstream 1627620 41029340 ~ 41030449 (+)
G1068770 NA non-coding upstream 41314 39327082 ~ 39339590 (+)
G1068686 NA non-coding upstream 122914 39202307 ~ 39257990 (+)
G1068797 NA non-coding downstream 13134 39414854 ~ 39415056 (+)
G1068799 NA non-coding downstream 15707 39417427 ~ 39417633 (+)
G1068804 NA non-coding downstream 21240 39422960 ~ 39423161 (+)
G1068853 NA non-coding downstream 102503 39504223 ~ 39504756 (+)
G1068854 NA non-coding downstream 103133 39504853 ~ 39505782 (+)
styxl1 styxl1 other upstream 290961 39077007 ~ 39090045 (+)
prkrip1 LOC106567678 other upstream 1139531 38231737 ~ 38241376 (+)
G1067321 LOC106567676 other upstream 1211956 38168337 ~ 38168948 (+)
G1067221 NA other upstream 1441628 37938832 ~ 37939276 (+)
G1067156 LOC100380745 other upstream 1515429 37854888 ~ 37865475 (+)
G1070479 NA other downstream 890732 40292452 ~ 40292734 (+)
G1071144 NA other downstream 1712858 41114578 ~ 41114957 (+)
G1071159 NA other downstream 1735716 41137436 ~ 41137868 (+)
G1072789 NA other downstream 2795330 42197050 ~ 42216163 (+)
G1074265 NA other downstream 4443447 43845167 ~ 43845968 (+)

Expression

LOC110537603(LOC106567719) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.75.
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LOC110537603(LOC106567719) Expression in each Bioproject

Bar chart with 21 bars.
LOC110537603(LOC106567719) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
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Co-expression Network