zw10 (LOC106567722)


Basic Information

Item Value
gene id zw10
gene name LOC106567722
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 39494196 ~ 39502812 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036937558.1
CGTATAACGAAGTGGAACGCAGATTTGATTGGTTATTGTGAGCGGGCTTCTTCAACCTGCACACAGCCCTGAAGGATTTTGgtgctagccagctagctgttCTTCAACTATGGCATCTTTCGTGACAGAAGTCCTTGCTAGTTCTGGTAAACTTGAAAAAGAAGATCTCAATTGTAAAATAAGCAAGCTGTCACGGAAAGTAGAAGAAACTAAGGAAGAGGTATGTGACATTATTAACAAGAGGTACAATGAGTTCCTACCTAGCATGCAGGGGGCAGAGGCACTTATGGGACAGGCCGAAGAGGTCTCTAAAGAAATTGACATCCTCAAAAGCTGCATTGAGACAGAGgtgCAGCATAATCTACATACAGCTGTGACAGAACATGCCAAGCTGAAGCAGCAGCTGGAGAGAAACACTACTGTCATTGCCATGCTCAGGCACCTAGAAGAGTTTCACATTGCTATGGAGGAGTTTCACAAAGCCCTACTGGAGAAGAAGTATGTCATTTCGGCCACGCAGTTAGAAAAGGCCCGGCACAGTGCAGACGCTCTGAAGGCGTGGAAAGGCTCTGACCTGCCCCTGCTGAGAGCCCTCAGCTCAGAGCTCACTGTCCAGAGGGAGAACCTCATCTACCATctgggggatgagtggaagagaCTGGCTGTCTGGAAACTGCCTCCTTCCAAAGAGTCGACGGGGATGAAGTCGTTCCTGAAGATGGAGCTAAAGCTGACCCTAGGCGGGACCAAGGAGCCCCAGCAGAGCCCTCCCCCTCTGCTTTCCTGTATCCTCCAGGCCCTGGCCATCCAAGGGGAACTCCAACACAAGATCAAACTCTTCAGCCAGGTGCTGCTGAAGTACCTGCTGAAGCCCCTGATTACGTACCCCTCTCTGAACGTGGATGTGTCGGAGCAGCAAGGCGAGGGcatcctactctctctccagtGTGCCGAGACCCCCGAGGAGCACCCAAGTCCCTCGCAGGTCTACACCAAAGTCCTGGTGGTACTCAagaccctacacacacacctgctagACGTATCCGTTGCAGATGTATCAGTTGGCAGGAGAAAAGTGTCTGTCATACTGGGAGACCTGGTATGGCAGGAGATGTCTCACTGCATCATCCATGAGTGCCTCCTGCACTCCATCCCAACCAATAGCAGTCAGCTTGAACAGTACAGTGTGGTGATCAAAGAGACTGAGGAGTTTGAGAAGTCCCTGAAGGAGATGCAGTACCTCAGGGGAGACGCCACCGAGCTGCTCAAGTACGCCCGGGACATCAACTGCCACTTTGCCAGCAAGAAATGCAAAGACGTGATTGTGGCGGCACGCAAGCTGATGACCTCTGAGATGCACAACACCGTCAAAATCACACCAGATTCTAAGCTCTCAGTCCCCAAGCTACCCAGCCCAGGCTCTGGAGACAACAAGGGCAAGCAGAAGGCCAAGAAGCTTGAGGCGCCCCGGTTGGAGAACGAGAAGCAGCTGGGTGCACTGAcgctgtgtctgcctgtgtgtcgcATCAGCGAGTCGGTGCAGCAGCTGATGGAGCTGGCCCTGCACACGCTGTCCGAGGCCGTGGGCAGCTCCAGCCAATGTGCTACCCAACTGTTCTTCACGGTGCGGAATATATTCCAGCTGTTCTATGATGTTGTGCCTACATACCATAAAGGGAACCTACTCAAGTTCCCCCACCTGGCAGCCATCCAGCACAACAACTGCATGTACATCGCCCACCACCTGCTCACCCTCGGCCACCAGTTCAGGCCACACCTGCCCGACCCCCTCAGCGAGGGCGCTGCCACCTTCGTGGACCTGGTGCCCGGCTTCAGGAAACTGGGCGCTCAGTGTTTCCTGGCCCAGCTGAACGTCCAGAGAGCAGAGATGCTGGAGCGTCTCTCCACGGCACGCAACTTCTCCAACCTGGATGACGAGGAGAACTACTCCGCAGCCAGCAAGGCTGTCAGGCAGGTCATCCATCAGCTGAAGAGGCTGGGCACAGTCTGGCAAGATGTTCTACCAGTCAACATATACTGTAAAGCCATAGGGACTCTACTCAACACTGCCATCTCAGAGCTGATTGCCAAAATCATGATGCTGGAGGATATCTCCACTGAAGATGGGGAGCACCTACACATCCTCTGTCAGACTATTATCGAGGAAGGACCCCTGGTGTTCATTCCTCTGCCTGAGGAGAGCAAGAACAAGAAGTACCAGGAGGAGGTATCCGTGTACGTGACAAAGTGGATCACCTTCAAGGAGCTGGTCATAGTGCTGCGAGCTAACCTGCAGGAGATAGTTGACAGGTGGGCGGAGGGCAAAGGACCTCTGGCACTGGAGTTCTGTAGTTCCGAGATGAAGAGCCTGATTCGAGCTTTGTTCCAGAACACTGAGAGGCGGGCGGTGGCTCTCAGCAAAATCAAAGACTCTTGATTCCAACAAACAACCCTAATATGCGCAGCACTTTCCTTCACTGCTGTGGAAAAGTGTTCATTAATATCTTAATGCCTAGTTGTGAACTTAAATGCAATATGCCATTGTATACGATAACTGTGGCATATAAACTGCTGTTTTAAAATCCCAATAACGCTTCTACTTTCAGCAAAGCCATTAATGCAATGAGGACAAGCTCTACCACATTACTGCAAAAGGCTCGGGCTATTGCCTTTCATGAAACTGTGTTTTCTTTCTCCAATATTTCATAAAGTTATTTGTACCTGAAACTGCATTCTGAATGAGCACTATGTGAACTGAAACGTTCAGATGGGACATTTCTACATGTCTCTTCTACCATGATAATCCAAATGCTTTACTATTTTTCTTAATGTTTCGTgcttggattttttttgttgtgtacTTAGAAATTACATTGTGAATTGATAATGCAGGAATATGGTTGAAGAAGTGCTGGTAGCTACATGGAGCAACCGGTACATCTATCAGTTAATGTATATTTTAGTTATGCGATAAATTATAATTTCCTATCAAATTCAACAAGCTAGGGTAGTATTCATTAAGTTGAAAAACTTTTCGTCTGTTGCAAAAATGTTGCAACAAATAATTTACGCAACCCTCATCAGCGTGACAAACTGTTGTGTTGGTCAATGGAAGTTGTAGTAAATTTACATTTTATGGTTTCTACTCATTGTAATTTCAATCCATATAGTCTGCGACGTGTTTGGCGTGAAGTTCACATCTATAAATGATTGATTCTTCCATGCTAA

Function

NR:

description
centromere/kinetochore protein zw10 homolog

GO: NA

KEGG:

id description
K11578 ZW10, DSL1; protein transport protein DSL1/ZW10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036937558.1 True 3228 mRNA 0.49 15 39494196 39502812

Neighbor

gene id symbol gene type direction distance location
ddx10 LOC106567721 coding downstream 175 39425122 ~ 39494021 (-)
si:dkey-183i3.9 yk005 coding downstream 84427 39406573 ~ 39409769 (-)
si:dkey-183i3.5 LOC106567720 coding downstream 88933 39398996 ~ 39405263 (-)
si:dkey-183i3.6 LOC106567717 coding downstream 117147 39371194 ~ 39377049 (-)
zgc:171740 LOC106567716 coding downstream 135344 39343615 ~ 39358852 (-)
LOC110537606 LOC106567723 coding upstream 3111 39505923 ~ 39508142 (-)
LOC110537607 LOC100194713 coding upstream 15785 39518597 ~ 39546033 (-)
LOC110537608 LOC106567727 coding upstream 65549 39568361 ~ 39690332 (-)
ncam1a LOC106567728 coding upstream 224962 39727774 ~ 40043489 (-)
LOC118937672 NA coding upstream 470230 39973042 ~ 39979531 (-)
G1069610 NA non-coding downstream 74852 39419107 ~ 39419344 (-)
G1069606 NA non-coding downstream 78163 39415716 ~ 39416033 (-)
G1069600 LOC106567719 non-coding downstream 97862 39395581 ~ 39396334 (-)
G1069544 NA non-coding downstream 198337 39295625 ~ 39295859 (-)
G1069543 NA non-coding downstream 200290 39293444 ~ 39293906 (-)
G1069635 NA non-coding upstream 1313 39504125 ~ 39504676 (-)
G1069650 NA non-coding upstream 12850 39515662 ~ 39515872 (-)
G1069652 NA non-coding upstream 14511 39517323 ~ 39517552 (-)
G1069679 NA non-coding upstream 57151 39559963 ~ 39560182 (-)
G1069685 NA non-coding upstream 61231 39564043 ~ 39564266 (-)
fkbp6 LOC106567715 other downstream 156222 39336054 ~ 39343006 (-)
G1069456 LOC106567699 other downstream 385234 39108300 ~ 39108962 (-)
LOC110537579 LOC106603438 other downstream 421724 39041272 ~ 39072520 (-)
LOC110539142 NA other downstream 1787825 37672182 ~ 37706371 (-)
LOC110537546 ppm1e other downstream 1826942 37603158 ~ 37667366 (-)
G1071725 NA other upstream 1536054 41038866 ~ 41039931 (-)
G1073009 NA other upstream 2543051 42045863 ~ 42062632 (-)
G1074731 NA other upstream 3201191 42704003 ~ 42713923 (-)
G1075335 NA other upstream 4060973 43563785 ~ 43564240 (-)
G1075399 NA other upstream 4157747 43660559 ~ 43660837 (-)

Expression


Co-expression Network