Gene
RNA
| Item | Value |
|---|---|
| gene id | htr3b |
| gene name | LOC106567726 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 39546047 ~ 39555571 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: 5-hydroxytryptamine receptor 3B |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036937565.1 | False | 2988 | mRNA | 0.45 | 9 | 39546047 | 39555571 |
| TU1217369 | True | 552 | lncRNA | 0.36 | 1 | 39554896 | 39555447 |
39,542,000
39,544,000
39,546,000
39,548,000
39,550,000
39,552,000
39,554,000
39,556,000
39,558,000
39,560,000
39,562,000
39,564,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537603 | LOC106567719 | coding | upstream | 144327 | 39380904 ~ 39401720 (+) |
| LOC110538893 | rfc2 | coding | upstream | 174689 | 39362997 ~ 39371358 (+) |
| LOC118937671 | NA | coding | upstream | 184021 | 39358964 ~ 39362026 (+) |
| mks1 | mks1 | coding | upstream | 263593 | 39266156 ~ 39282454 (+) |
| LOC110537593 | LOC106567711 | coding | upstream | 272030 | 39216300 ~ 39274017 (+) |
| htr3a | LOC106567725 | coding | downstream | 1118 | 39556689 ~ 39563770 (+) |
| LOC118937980 | NA | coding | downstream | 619780 | 40175351 ~ 40175541 (+) |
| cadm1a | LOC106567730 | coding | downstream | 955587 | 40511158 ~ 40938098 (+) |
| LOC110539145 | NA | coding | downstream | 1473769 | 41029340 ~ 41030449 (+) |
| anapc13 | anc13 | coding | downstream | 1570836 | 41126407 ~ 41130505 (+) |
| G1068856 | LOC106567723 | non-coding | upstream | 38367 | 39506223 ~ 39507680 (+) |
| G1068855 | NA | non-coding | upstream | 39868 | 39505797 ~ 39506179 (+) |
| G1068854 | NA | non-coding | upstream | 40265 | 39504853 ~ 39505782 (+) |
| G1068853 | NA | non-coding | upstream | 41291 | 39504223 ~ 39504756 (+) |
| G1068804 | NA | non-coding | upstream | 122886 | 39422960 ~ 39423161 (+) |
| G1068899 | zbtb16 | non-coding | downstream | 12985 | 39568556 ~ 39573507 (+) |
| G1068904 | NA | non-coding | downstream | 28274 | 39583845 ~ 39586230 (+) |
| G1069722 | NA | non-coding | downstream | 166829 | 39722400 ~ 39722620 (+) |
| G1069735 | LOC106567728 | non-coding | downstream | 199995 | 39755566 ~ 39774712 (+) |
| G1070164 | NA | non-coding | downstream | 496599 | 40052170 ~ 40052392 (+) |
| styxl1 | styxl1 | other | upstream | 456104 | 39077007 ~ 39090045 (+) |
| prkrip1 | LOC106567678 | other | upstream | 1304674 | 38231737 ~ 38241376 (+) |
| G1067321 | LOC106567676 | other | upstream | 1377099 | 38168337 ~ 38168948 (+) |
| G1067221 | NA | other | upstream | 1606771 | 37938832 ~ 37939276 (+) |
| G1067156 | LOC100380745 | other | upstream | 1680572 | 37854888 ~ 37865475 (+) |
| G1070479 | NA | other | downstream | 736881 | 40292452 ~ 40292734 (+) |
| G1071144 | NA | other | downstream | 1559007 | 41114578 ~ 41114957 (+) |
| G1071159 | NA | other | downstream | 1581865 | 41137436 ~ 41137868 (+) |
| G1072789 | NA | other | downstream | 2641479 | 42197050 ~ 42216163 (+) |
| G1074265 | NA | other | downstream | 4289596 | 43845167 ~ 43845968 (+) |
