esama (LOC106567655)


Basic Information

Item Value
gene id esama
gene name LOC106567655
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 41805076 ~ 41877145 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623798.2
tggtatattggccatataccacaaaccccccgaGGTGCCTTGTTACTATTATAAATTGGTTACCagcgtaattagagcagtaaaaatatgttttgtcatacccgtggtaaacggtctgatataccacggctgtcagccgatcagcattcagggctcgaaccacccagtttataattgggAATAGTTATTTTCATACGGTTTCTTTATTTGGGAATAGAACCACTACACCTGTAAGTGCGCAGAATGTCAAGAGTGACGTTGTTAATGTGCACAGGTGTCGGTTATTGAGGTGGCAGGGCAGAGCATTCTCACCGTGAGAACTTTGTTCGTTTTTGACGACGACCGATGCATGAACGACGAAGTCGACGAAGACATTTTTGTAAGAAAATATCTGGACACTTGCCAAAGTAGGCTGCTGGAAAAATTATTTGCGCGCTACGCTAAATGCGAACGCGAGGCTTTATCACTCTCACGTCAACTGCTGCTGAGAACGAGATGATTTAACTCCGGATAATGTCACATTGCCCACTGTAAACTCGCTACCCCAAGTCTTCGCTCTGGCGGTTCAAGGTAGTGCGAAATTGCTCACAGATAACGGGGAGACAATACATTAAGACAGGAAACAGCAGCTGTGGGTCAAACAGAAGACGCATGTTGAACTATGGAGATGTATACTTCGAGGAAACTTTGCATCTTGCTGTCGTTCacatttttcttgtttttcacaGGTGTGTTGGCCCAGATCCAGATGCCGCAGAGGACCATGGAAGTGATCGAGGGTCAGAAAGTGGTGCTGCAGGCCTGGTACAGCCCCAGCTCCATCACTGGCAAGAACACCGTTCTCTGGAACTTTGTGGCCAATAACACCCAACTGATCATCTCGTACACCCCAGACTCGATCAGTTTTGGCAGCCCCCAGTTCGGGGAGCGTGTGGGCTTCACGGCCACCATGCCCTCGGCCAACCTGTCCCTGTACATCAACAACACGCAGGAGTCGGACTCAGGACGCTACCTCTGCCAGGTCATCATCCCCGGGGCCCAGGGCCTGACTGGAGAACTTAGCCTCAACGTCAATGTTCCTCCTGCTGTCCCAGAGTGCTCTCTGTCAGGGAAGCCAGTTCTGAAGGGCAACGTCACACTGAGCTGCAAGTCCAAGTCAGGAAAGCCCATCCCAATGTACAAGTGGAAGAAGACCAGCCCCCCGTCCGAGGTCTTCTTCTCGCCCATGCTCAATGAAAAAACGGGCACGCTGAAGCTGAGCAACTTGAGCAGCAGCATGTCGGGGAAGTACGTTTGTACGGCCAGCAACACAGCTGGCAATGACAGCTGCTACATCAACCTGGAGGTCATTACCTCAACTAACGCAGGGATGATTGCTGGAGCCACGGTGGGCTCGGTGTTGGTCTTCATattcatcatcctcttcctcatctacCTTCTGAGGCGAAAGAGAGACTATGAAGAGGACCGGGCCAATGACATCAAGGAGGACGCTCAGGCGCCCAAGCGCATCTCGTGGGCCAAGAGCGCCGGCTCAGGATCGGACGTGGTCTCCAAGAATGGCACActctcctccatcaccaccactgcCAACAGGCCCCACCAGAGGGAGCCCTCGtcccaccaccagcaccaccacaaccaccacctccaGCATTATCCCCAACGCCCTCCCTCTGACACAGCCTCCATCATCACAGCCACAGGCAGCGTCTCTGGCTACCGTGCTGGACCACGCCATGGATCCTCCACCAAAGGCCACGCCGTGCCGGACTACGGCTACAACGTGGCTACACCCCTGCCCCGAGGTCAACCGGCTAATTCTGCTGCATCCAGTGCCAACGGTAGCCCCATGCCAAGAACCAAGCACCCACAGTCCTATACCCAGCCCCAGGCAGCACCTGCTTCCCCACGCCCACCACCTCTGCCCACCATTGTGACTGCGTCCAACATCTCCCGCATGGGAGGTGTGCCCATCATGGTGCCAGCTCAGAACCAGGCTGGTTCGCTGGTGTAACACCAGTCTGCTATGGTGCATTGTACCTTTACCCTTCAACGTTGTACTTACTCACATAGATTTTCAAAAGGAAAATATTCAACTGCCACTAAGATATGTCTAACTCGAGCATTAAAGCTTGAATTGGCCTTCGAGAAGCTGGGGCATTTGACCCGGTCAAAATGCAGTGAGATCATTAGTAAGACCTTAAAAGAGATGGACTGTGTTGCTACATAAGGCAGTTTTATTTAATTAAGTATATGGAagtactttttatttttattttttacacttttTATACTCAGTTTGTATGCGAAGGATGCATAGATCTGGATTTCATACATTTGTGCAGTATCTTTTTTTAAGTTATTATTGTACTATCAATCAATGTATTTTTTACAAAGTTTTCCAATGCAACTTTTTTCGAGATTGTATTTACTCTATCTACCACGTCCTATGAAGGCCATTCTATGACATCACTTTAAAAACGGGGACAAGATGTCATGACACCCActggtcaatgtgtgtgtgttgcctgtgTATTACAGCAAGAACAGTCAATGTGTGGATCCCACTGATGTTTTACTTTATGCATTTCTCGCAGATTTTATCGATATGACAACTGTAGATTAGgaccaaataaaataaatatatatgtttaaTTGTCACATAAAccgataggtgcagtgaaatgtgttttacagggtcagcaatagtagtacggcacccctggagcagattagggttatgtgccttgctcaagggcacattgacagattttcaccttgttggcTGGGGTATTCGAACGCGCTaagcgctaggctacctgccaccctgtgcTTCAAACCAAATTTGCATATATTATTTTTATTCTCAAATATGGTGGACTACTGCTGAATACCTGTCTAGCCACATGCAATTAAGAAAGAAGAAAAAAGACTGGGCATACTAGAATGACATTTTCTGCAACATTTTCTAAATCCTAGGTAACCGTTACCTTTTCATGTACCTTGTATAAAACTTCATGCCGACGCTCTTTAGACACAGCGCTTAAAACATGACTATTTTACCGCATAGGAATAGCTTATAGTATAAAATACAATTTGACACATTTTGTCAATTACATTTGAATTTATGGACTAAGATATATAACCACTATGGTTCCACCATTGAGTTGTAATGATTTTTGGTTGCTCTCCACAAGGAaattgtaaataagatatttactATTTTTCTTTCGATTGTACTTGAGGCTATTCGTTGAATCGTATGTGACGGACTGGATACAAAACCAAAGAGGTTTCAATTTGTCAACATCCCAAACTGATGACCAATATGTTCATGGAAATAGACCCAAAAGGTGTCACATCAAATGAGTCTAAGATGAGGCACTTGTGTTTCATACGAGGCATAAAAGATGCAAGGCAAAAAACAATTACAAAGTGATTTTGGCTATGTCACTGATCAAACTACTCTTATGTCAATCTGGACTTCTTTGAAAGCATTTACTTTGGCAAAACTCTACTGTCCAACTTTTACCCTTAGTCTTGATTGCTCTATtcagacatgtctgtgtgtagcAAGGTAATGGTGTTCTGCTAGGGTTATGAACAAGATACTTGTAGCACATCCAAGAAACAAAGCGTGGCACACAAGACTACCCATTAAATATGAAGTGGAGGTTTGTGTCACTTTAAATCTGAGGACTGGTTCATATTAATGGCTGGAGttgaatagaatgaatagaacagctTAAATGAAGCATATGGTTTTCCTTCTAAGCCTATCCTCAACTTCTGTATCACTGGAGAATAGCTATTGCCAGTACACTGGAGCATAGagacactgttggagctaggaacacaagcatttccctacaccggcaataacatctgataaacgtgtgtatgtgaccaataaaatgttatatgATTTGATGTAAGAAATGTTTCCACACGGAAAAAGAAATTATGCGCACAGACAATTTTTGTTGTGTGGGAGACTAGCTCATACTCAAAATAACTTAGTTTGTGACATTCTTGTATGTGTAGTGGTATTCAATGGCAAATGCTTTTGCTGTTTTGAAGATGGAAAAAATATGAAACAATATTCAAGACTGGCCTTTTGTGATACTGTAATGTATATGCATTATGTAACACCGGGATAGAATTACAAAACAGGAACACGAAATGATAACATTTAATATCACGGAACATCTAATAAATACTAGTAATCGATTAGTTCTAACTGATAATGTAAGAAGACACACTGATGGCTGCTGTGCTAATGTATGTATTTATGCTCAAACATAGACCACTATGTCGAGTGTTTAAGTTTCTTCAACTAGTATGTATATTGAAAATACTCTTATCAATATTTTTAATAAAAAGATGAATGGTT
>TU1221247
CAATATGTTCATGGAAATAGACCCAAAAGGTGTCACATCAAATGAGTCTAAGATGAGGCACTTGTGTTTCATACGAGGCATAAAAGATGCAAGGCAAAAAACAATTACAAAGTGATTTTGGCTATGTCACTGATCAAACTACTCTTATGTCAATCTGGACTTCTTTGAAAGCATTTACTTTGGCAAAACTCTACTGTCCAACTTTTACCCTTAGTCTTGATTGCTCTATtcagacatgtctgtgtgtagcAAGGTAATGGTGTTCTGCTAGGGTTATGAACAAGATACTTGTAGCACATCCAAGAAACAAAGCGTGGCACACAAGACTACCCATTAAATATGAAGTGGAGGTTTGTGTCACTTTAAATCTGAGGACTGGTTCATATTAATGGCTGGAGttgaatagaatgaatagaacagctTAAATGAAGCATATGGTTTTCCTTCTAAGCCTATCCTCAACTTCTGTATCACTGGAGAATAGCTATTGCCAGTACACTGGAGCATAGagacactgttggagctaggaacacaagcatttccctacaccggcaataacatctgataaacgtgtgtatgtgaccaataaaatgttatatgATTTGATGTAAGAAATGTTTCCACACGGAAAAAGAAATTATGCGCACAGACAATTTTTGTTGTGTGGGAGACTAGCTCATACTCAAAATAACTTAGTTTGTGACATTCTTGTATGTGTAGTGGTATTCAATGGCAAATGCTTTTGCTGTTTTGAAGATGGAAAAAATATGAAACAATATTCAAGACTGGCCTTTTGTGATACTGTAATGTATATGCATTATGTAACACCGGGATAGAATTACAAAACAGGAACACGAAATGATAACATTTAATATCACGGAACATCTAATAAATACTAGTAATCGATTAGTTCTAACTGATAATGTAAGAAGACACACTGATGGCTGCTGTGCTAATGTATGTATTTATGCTCAAACATAGACCACTATGTCGAGTGTTTAAGTTTCTTCAACTAGTATGTATATTGAAAATA

Function

NR:

description
PREDICTED: endothelial cell-selective adhesion molecule-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623798.2 False 4396 mRNA 0.44 7 41805076 41877145
TU1221247 True 1033 lncRNA 0.36 1 41805112 41806144

Neighbor

gene id symbol gene type direction distance location
LOC118937883 NA coding downstream 64749 41738721 ~ 41740327 (-)
igsf9bb LOC106567733 coding downstream 238421 41376290 ~ 41566655 (-)
arhgap32b arhgap32 coding downstream 441066 41130156 ~ 41364010 (-)
sc5d sc5d coding downstream 703185 41093182 ~ 41101891 (-)
LOC118937914 NA coding downstream 710357 41094582 ~ 41094719 (-)
LOC110537621 msantd2 coding upstream 7594 41884739 ~ 41891363 (-)
LOC110537624 robo4 coding upstream 348026 42225171 ~ 42253779 (-)
tmem218 tmem218 coding upstream 381505 42258650 ~ 42265787 (-)
LOC110538899 LOC106567646 coding upstream 1080292 42957437 ~ 43517782 (-)
LOC118937884 LOC106611372 coding upstream 1668888 43546033 ~ 43575350 (-)
G1072538 NA non-coding downstream 1619 41803237 ~ 41803457 (-)
G1072497 LOC107751387 non-coding downstream 13815 41785132 ~ 41791261 (-)
G1072519 NA non-coding downstream 35159 41769695 ~ 41769917 (-)
G1072500 NA non-coding downstream 71023 41733850 ~ 41734053 (-)
G1072499 NA non-coding downstream 71476 41733325 ~ 41733600 (-)
G1073025 NA non-coding upstream 201754 42078899 ~ 42079144 (-)
G1073081 NA non-coding upstream 289755 42166900 ~ 42192399 (-)
G1073256 NA non-coding upstream 530004 42407149 ~ 42407395 (-)
G1074536 NA non-coding upstream 541650 42418795 ~ 42431550 (-)
G1074908 NA non-coding upstream 1035932 42913077 ~ 42918069 (-)
G1071725 NA other downstream 765145 41038866 ~ 41039931 (-)
fkbp6 LOC106567715 other downstream 2467102 39336054 ~ 39343006 (-)
G1069456 LOC106567699 other downstream 2696114 39108300 ~ 39108962 (-)
LOC110537579 LOC106603438 other downstream 2732604 39041272 ~ 39072520 (-)
LOC110539142 NA other downstream 4098705 37672182 ~ 37706371 (-)
G1073009 NA other upstream 168718 42045863 ~ 42062632 (-)
G1074731 NA other upstream 826858 42704003 ~ 42713923 (-)
G1075335 NA other upstream 1686640 43563785 ~ 43564240 (-)
G1075399 NA other upstream 1783414 43660559 ~ 43660837 (-)
G1075509 NA other upstream 1896919 43774064 ~ 43774425 (-)

Expression


Co-expression Network