LOC118937676


Basic Information

Item Value
gene id LOC118937676
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 44202181 ~ 44208228 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034987.1
TTCCCTTTTCACATGGCGTcctatacatttacattttagtcatttagcacacACTCTTATCTAGAGCTACTTAGAGTTAGTACAtttatcttaagatagctaggtgggacaaccccATATCTCAGTCATGCCGTCTCCTGCATGTTCACCATCAACAGCGGATGACCAAATTGGGCTCTTTCCCAGTTCCCGCCACCCACCCCTTGCTGGCCTCCCCATGCCCATTCCCACACATTCCTAAACAGTCGTCACTCATCAGCACTCTTAAAGACTGACCGTAACAGAACCTCCCACCACGAAAGGACCAAACAACGTGGTAaagaggactcctggacatgggaggagatcctggatggtAAGGGACCCTGGAGGCAGGTTGGGGAGTATCACCATCCAcaggaggaactggaggcagctaaggCGGAGCGGCAACattatgagggaacacggctggcaaggaagcccgagaggcagcccccagaattttttggggggaggggggcacaAGGGGAGTGTGgcggagtcaggttggagacctgagccaactccccgtgcttaccgtggcgagcatgtgactggtcaggccccgtgctatggggtgatgctCACTATGTCGAGGATGAGCATTCACGGGCCGGTGTGCTCGGTTccagcgtcccgcatttgccgggtggaagcgggcatccagccagaacgggtgGTGCCAGCTCTGCGCACGAGACCGCCAGTGCGCCTCCatggcccagtgtatccggtgcctcggccaaggaagaggcctcctgtatgtctccccagcctggtgagtcctgtgcctgctcccaaaGACAGGTCTCTtgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034987.1 True 837 mRNA 0.57 3 44202181 44208228

Neighbor

gene id symbol gene type direction distance location
LOC110537650 LOC106567629 coding downstream 32653 44160926 ~ 44169528 (-)
LOC110537649 LOC106567630 coding downstream 66375 44126926 ~ 44135806 (-)
LOC110537647 LOC106567631 coding downstream 92265 44106634 ~ 44109916 (-)
LOC110537642 LOC106567634 coding downstream 256327 43920894 ~ 43945854 (-)
LOC110537640 LOC106567637 coding downstream 338225 43840844 ~ 43863956 (-)
LOC110537653 LOC106567625 coding upstream 37379 44245607 ~ 44295011 (-)
LOC110537654 LOC106567624 coding upstream 124648 44332876 ~ 44373197 (-)
LOC110537655 LOC106567623 coding upstream 169715 44377943 ~ 44388854 (-)
LOC110538901 LOC106603699 coding upstream 182804 44391032 ~ 44397968 (-)
LOC110537656 capns1 coding upstream 221842 44430070 ~ 44439278 (-)
G1075711 NA non-coding downstream 11303 44190677 ~ 44190878 (-)
G1075693 NA non-coding downstream 44715 44157173 ~ 44157466 (-)
G1075429 NA non-coding downstream 57233 44137965 ~ 44144948 (-)
G1075664 NA non-coding downstream 138228 44063514 ~ 44063953 (-)
G1075600 NA non-coding downstream 183316 43983900 ~ 44018865 (-)
G1075790 NA non-coding upstream 95649 44303877 ~ 44304150 (-)
G1075804 NA non-coding upstream 103167 44311395 ~ 44311923 (-)
G1075825 NA non-coding upstream 118362 44326590 ~ 44326906 (-)
G1075939 NA non-coding upstream 201545 44409773 ~ 44410004 (-)
G1075944 NA non-coding upstream 208150 44416378 ~ 44416827 (-)
G1075509 NA other downstream 427756 43774064 ~ 43774425 (-)
G1075399 NA other downstream 541344 43660559 ~ 43660837 (-)
G1075335 NA other downstream 637941 43563785 ~ 43564240 (-)
G1074731 NA other downstream 1488258 42704003 ~ 42713923 (-)
G1073009 NA other downstream 2139549 42045863 ~ 42062632 (-)
G1076460 NA other upstream 246420 44454648 ~ 44455270 (-)
LOC110537661 LOC101073377 other upstream 338291 44546519 ~ 44601149 (-)
gria4b LOC106567580 other upstream 925624 45133844 ~ 45296904 (-)
G1078323 LOC106567565 other upstream 1994376 46202604 ~ 46206088 (-)
G1078783 NA other upstream 2608215 46816443 ~ 46817065 (-)

Expression


Co-expression Network