plekhb1 (plekhb1)


Basic Information

Item Value
gene id plekhb1
gene name plekhb1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 44607162 ~ 44610310 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021626111.2
TCAAAATAAAGGCACCgtatgtccctctgtctctctgcagacAGCTCTTCAACCAAGAACAAACTCTCAACATACACAGGACAAACACTCCTGTCACAAACATATTATTTGGGGTGAGGAATTGTGTTGTGGACAGCTCACTGACCGTACCCATGGCTCTACTGAAGTCAGGCTGGCTCTGGagacagaCCTCTATCCTAAAACACTGGAAGCTGAATTGGTGTGACCTGTGGATCGATGGAACCCTGGCCTTCTACAAGACGGACAGTAGGCGAGAATTTGAGCACCGAGTGGGCCTCAAGACCAGCTGTGTGAGCGTCAAGTCTGGCCTGGAGTGTGCAGGTCTCTCTCCCCCAGAGAACCACCCCAGGGAAAACCTGGTGGTGGTGCAGCTTAAAGACAGTACCACAGTGATCCTGTGTGCCAACAGTGAGGACGAGGCACTAGCGTGGAAATTGACAATTCTAGAGGTGAGACAAAACCCATTTGTGTATGACCCGTATAATGACTCCTACCCGTCCGTCCCAATGGACGGCCACAACACCATCTACCTGGCTCCTGGATCAGgtACCCACCACATACTGATCCAGAGAGACCCATACGATGGCATAGGAGAACAGGTGGCACTGGGGCTACTGGCTGGCATGGCGGCAGGCGCTGCTATGCGCTCCTTTCTCTGGATGCCCTTCTTTTTCTGCTGATATAGAAGACCTCTATAAGCAGGGAGGCACGGCTGGGAAACTCCCAGGCTCATATATGTAGGAGTGCTGCTGTAGGCATCACTCCTAAAAGTCTTATTTTCTTGTCATCCTTGAGTAAAAGTaatgataccttaatagaaaaggacTCAAGTAAAAGCGAAAGTCACCCAAGAAAATACTACTTgagaaagtctaaaagtatttggttttaaatatacttaagtatcaaaagtaaaagtaaaagtatacattatttcaaattccttatattaagcaaaccagactgcacaataaaaaataaaaaaaacttttatggatagccaggggcacactccaaaaaataaatagtaaagtacaggtaCTCCAAAACACTACTtaagtaatactttaaagtatttttacttaagtactttagacCACTGCCATTGCAGAATATGGgtgcacgtgtttgtgtgtgtgtgtatcatcatTTGTTGTACATTTGTCCTTAATGACATAGGCTAAATTCACACAGCATATTTAGTATGAATGtacagtacccgtcaaaagtttggacacacctactcgttccaggattttactttatttttactattttctacgttgtggaataatagtgaagacatcaaaac
>XM_021626112.2
TCAAAATAAAGGCACCgtatgtccctctgtctctctgcagacAGCTCTTCAACCAAGAACAAACTCTCAACATACACAGGACAAACACTCCTGTCACAAACATATTATTTGGGGTGAGGAATTGTGTTGTGGACAGCTCACTGACCGTACCCATGGCTCTACTGAAGTCAGGCTGGCTCTGGagacagaCCTCTATCCTAAAACACTGGAAGCTGAATTGGTGTGACCTGTGGATCGATGGAACCCTGGCCTTCTACAAGACGGACAGTAGGCGAGAATTTGAGCACCGAGTGGGCCTCAAGACCAGCTGTGTGAGCGTCAAGTCTGGCCTGGAGTGTGCAGGTCTCTCTCCCCCAGAGAACCACCCCAGGGAAAACCTGGTGGTGGTGCAGCTTAAAGACAGTACCACAGTGATCCTGTGTGCCAACAGTGAGGACGAGGCACTAGCGTGGAAATTGACAATTCTAGAGTTTGTGTATGACCCGTATAATGACTCCTACCCGTCCGTCCCAATGGACGGCCACAACACCATCTACCTGGCTCCTGGATCAGgtACCCACCACATACTGATCCAGAGAGACCCATACGATGGCATAGGAGAACAGGTGGCACTGGGGCTACTGGCTGGCATGGCGGCAGGCGCTGCTATGCGCTCCTTTCTCTGGATGCCCTTCTTTTTCTGCTGATATAGAAGACCTCTATAAGCAGGGAGGCACGGCTGGGAAACTCCCAGGCTCATATATGTAGGAGTGCTGCTGTAGGCATCACTCCTAAAAGTCTTATTTTCTTGTCATCCTTGAGTAAAAGTaatgataccttaatagaaaaggacTCAAGTAAAAGCGAAAGTCACCCAAGAAAATACTACTTgagaaagtctaaaagtatttggttttaaatatacttaagtatcaaaagtaaaagtaaaagtatacattatttcaaattccttatattaagcaaaccagactgcacaataaaaaataaaaaaaacttttatggatagccaggggcacactccaaaaaataaatagtaaagtacaggtaCTCCAAAACACTACTtaagtaatactttaaagtatttttacttaagtactttagacCACTGCCATTGCAGAATATGGgtgcacgtgtttgtgtgtgtgtgtatcatcatTTGTTGTACATTTGTCCTTAATGACATAGGCTAAATTCACACAGCATATTTAGTATGAATGtacagtacccgtcaaaagtttggacacacctactcgttccaggattttactttatttttactattttctacgttgtggaataatagtgaagacatcaaaac

Function

symbol description
plekhb1 Predicted to be involved in regulation of cell differentiation. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human PLEKHB1 (pleckstrin homology domain containing B1).

NR:

description
pleckstrin homology domain-containing family B member 1 isoform X2

GO: NA

KEGG:

id description
K23857 PLEKHB; pleckstrin homology domain-containing family B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021626111.2 False 1333 mRNA 0.43 6 44607162 44610310
XM_021626112.2 True 1318 mRNA 0.43 6 44607162 44610310

Neighbor

gene id symbol gene type direction distance location
LOC110537661 LOC101073377 coding downstream 6013 44546519 ~ 44601149 (-)
LOC118937885 NA coding downstream 38022 44564224 ~ 44569140 (-)
nova1 LOC106567594 coding downstream 87940 44479843 ~ 44519222 (-)
alkbh6 alkbh6 coding downstream 133703 44456976 ~ 44473459 (-)
LOC110537656 capns1 coding downstream 167884 44430070 ~ 44439278 (-)
LOC110537668 LOC106603713 coding upstream 273483 44883793 ~ 44965601 (-)
LOC110537669 LOC106567584 coding upstream 361688 44971998 ~ 45021139 (-)
LOC118937886 NA coding upstream 412514 45022824 ~ 45026146 (-)
LOC110537671 LOC106567583 coding upstream 419779 45030089 ~ 45072800 (-)
gria4b LOC106567580 coding upstream 523534 45133844 ~ 45296904 (-)
G1076549 NA non-coding downstream 3868 44602316 ~ 44603294 (-)
G1076534 NA non-coding downstream 22620 44583390 ~ 44584542 (-)
G1076519 NA non-coding downstream 52879 44552944 ~ 44554283 (-)
G1076464 NA non-coding downstream 129003 44477370 ~ 44478159 (-)
G1076465 NA non-coding downstream 129917 44476294 ~ 44477245 (-)
G1076588 NA non-coding upstream 82552 44692862 ~ 44697846 (-)
G1076610 NA non-coding upstream 93919 44704229 ~ 44733447 (-)
G1076648 LOC106567588 non-coding upstream 150532 44760842 ~ 44767448 (-)
G1076674 NA non-coding upstream 205162 44815472 ~ 44820392 (-)
G1076713 NA non-coding upstream 269128 44879438 ~ 44882247 (-)
G1076460 NA other downstream 151892 44454648 ~ 44455270 (-)
G1075509 NA other downstream 832737 43774064 ~ 43774425 (-)
G1075399 NA other downstream 946325 43660559 ~ 43660837 (-)
G1075335 NA other downstream 1042922 43563785 ~ 43564240 (-)
G1078323 LOC106567565 other upstream 1592294 46202604 ~ 46206088 (-)
G1078783 NA other upstream 2206133 46816443 ~ 46817065 (-)
LOC110537706 LOC106567549 other upstream 3304241 47911648 ~ 47942039 (-)
G1081055 NA other upstream 3808111 48418421 ~ 48418884 (-)

Expression


Co-expression Network