LOC110537676 (LOC106567578)


Basic Information

Item Value
gene id LOC110537676
gene name LOC106567578
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 45515361 ~ 45527757 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623902.2
TTACATCCGGTGGATGAGGTCAATCTTTCCCCAAAGATCCGCCATTTCAGCCTCTGAGTTTTATATTGCAAATTACTTAAGAGATTTATTTTAAAACGCCTTGACAAATAAATTATAGATTTCTGGTTGCCACAATTAATTCTTAATTAAGGGGTTAACTGTATTGTTTCGTGGGACTCTGTGAAATGTACATAGATGTAACGGTTTAAAGCGGTATCGATGCCATGATTTTTTCCCGGAGCGTGTTCCTTAGTGAACCAAAGTTTTTGTATGAGATGAATCCCGATTGCGAATAGGGAGAGGCAAGGGGAAGGCCTTGGATCCTCGGAGTGGATTTGGAGCCATGGCCGGGAATTTTGATGCCGAGGACCGTGCTAGCTGGTACTGGGGAAGGTTGAGCCGACAGGAGGCGGTTTCTCTCTTGCAGGGTCAGAGACATGGCGTGTTCCTAGTCAGGGACTCGATTACCAGTCCTGGGGACTACGTGCTATCCGTCTCAGAAAACTCAAAAGTCTCACATTATATAATTAACAGCATCAGTAACAACCGGCAATCTGGATCAGGTCTGGCCCCCCCACGGTTCCGCATCGGGGATCAGGAGTTTGACGCCCTACCCGCCCTGCTGGAGTTCTACAAGATCCACTACCTGGACACCACCACTCTGATCGAGCCCATCAGCAAGGCCAAGCATGCAGGCTTCGTGAGCTGTGCCGCCGCTGCATCAGGCGGCGCCCTACAGGAGGCAGAGTTTGTTCGCGCCCTCTTCGACTTCCCTGGCAACGACGAGGAGGACCTGCCCTTCCGCAAGGGCGACGTGCTGCGCGTGCTGGAGAAGCCTGAGGAGCAGTGGTGGAACGCGGCCAACCAAGAGGGCCGTGTCGGCATGATTCCCGTGCCCTACGTGGAGAAGTACCGGCCTGCCTCGCCCAACTCCGTGGTTGCTCCGGCGGCAGGGAGGCCTGGCGGGGCAGGAGGAGTAGGCGGAGTACCGGCAGGTGTTGGAGCCAGCACTACCGACGGAGCAGCTCCCCAGCTGCCCCCGCCTCTGGGGGAGCCGGGCCAGTATGCCCAGCCTGTGGGCAATACACCCCTGCCCAACCTGCAGAATGGGCCTGTCTACGCCCGTGCCATTCAGAAGAGAGTGCCCAACGCCTACGACAAGACGGCGCTCGCCTTGGAGgTCGGAGACATGGTAAAAGTGACCAAGATCAACGTGAACGGCCAGTGGGAGGGCGAGTGCAAGGGCAAGCATGGCCACTTTCCCTTCACGCACGTCCGGCTTCTGGACCACCAACACCCTGAGGATGAGAGCTGAGAGACACACTTAGTCTCACTCCTCACTTCACAAAATCCCTCTGTGATTGTTTCTCACAAATGATAGAAAGAGCACACAGGATATACGGACTACAGTGGTCAGGAGTTGCAACTCAGCAGCTGTTGTTGCCAATGGGGCTGGAGTACACTCCCCTcccttcacatacacacacagaatagAGTTTACACTTCCACCCCAGTATTGAAGTCCTGATACACGACACACAGCAGCGTTTATGACCCCTCTCCCATGTTATCCACGAAATCctcctctacacacacatacacacgtacgcacgcacacaatTCAGATACTTGTGTATATGTGGCTTCTCTCACAGACTCATGGATCACCCTTTTGTAGTAACGGACTGTGAACTTGGCAGTGAGAAGAGTAGCCATCCTGACTCCTAATTTTGACTCCCTCTTGTGGAGACAGATGCTCACTGCGACTGAAACCGACCATTGCTGCACTTCACAGACAGCAGGAGTTACCACAGCACACTCCACTACTCACCACAGGGGCTCTAACCCAGCCCCTCTCTGCTACAAACCCCACACTACAAACCCCCAAGTCCTCTTTTTGTACTGAAATGAAAAATATTATGATAGAATTATGACAGGTACAGCAACTGCCAAaagaaaggaaacacttgagtaaatgatggATACAAAGTattttgaaagcaggtgctttcaCACAGGTGCGGTTCCTCAGCAATTcctaagcaattaacatcccaacatgcttagggtcatgtatgaaAATGCTGGGCAGGCATTGTTTTGGCTaacatggctatgcccccataggatgacaatgcccccatccacagggcattaATGGTCACttaatggtttgatgagcatgaaaacgatgtaaaccatatgatgtggccatctgtcaccagatctcaacccaattgtaCACTTATGcgagattctggagtggcgctTGAGAccaccaacaaaacaccaaatgatagAATTTCTCAtggaatggtgtcacatccctccaatagagttccatcCAGAAACGTGTATAATCTATGGCAAGGCACATTGCTGTTCTGGCTCATGGTGGcacaacgccctattaagacactattGGCGTTTCCTTTTTTTgggcagatatatatatataatatagtaccagtcaaaagtttggacacaccaactcattcaagagtttctttattt

Function

NR:

description
PREDICTED: adapter molecule crk-like

GO:

id name namespace
GO:0007520 myoblast fusion biological_process

KEGG:

id description
K04438 CRK, CRKII; C-crk adapter molecule crk

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623902.2 True 2514 mRNA 0.50 3 45515361 45527757

Neighbor

gene id symbol gene type direction distance location
LOC110537675 LOC106567579 coding downstream 10485 45466504 ~ 45504876 (-)
gria4b LOC106567580 coding downstream 218457 45133844 ~ 45296904 (-)
LOC110537671 LOC106567583 coding downstream 442561 45030089 ~ 45072800 (-)
LOC118937886 NA coding downstream 489215 45022824 ~ 45026146 (-)
LOC110537669 LOC106567584 coding downstream 494222 44971998 ~ 45021139 (-)
LOC110537678 LOC106567577 coding upstream 30319 45558076 ~ 45573323 (-)
LOC110537679 LOC106567575 coding upstream 63004 45590761 ~ 45644071 (-)
LOC110537682 LOC106567574 coding upstream 149621 45677378 ~ 45726321 (-)
LOC110538902 LOC106567602 coding upstream 204995 45732752 ~ 45815120 (-)
LOC118937677 NA coding upstream 289097 45816854 ~ 45820106 (-)
G1077960 NA non-coding downstream 1083 45511065 ~ 45514278 (-)
G1077966 NA non-coding downstream 45159 45469627 ~ 45470202 (-)
G1077959 NA non-coding downstream 53240 45461824 ~ 45462121 (-)
G1077078 NA non-coding downstream 117031 45398006 ~ 45398330 (-)
G1078036 NA non-coding upstream 67100 45594857 ~ 45595153 (-)
G1078026 NA non-coding upstream 72423 45600180 ~ 45604384 (-)
G1078039 NA non-coding upstream 74224 45601981 ~ 45612597 (-)
G1078040 NA non-coding upstream 78429 45606186 ~ 45613373 (-)
G1078072 NA non-coding upstream 169626 45697383 ~ 45697605 (-)
LOC110537661 LOC101073377 other downstream 914473 44546519 ~ 44601149 (-)
G1076460 NA other downstream 1060091 44454648 ~ 44455270 (-)
G1075509 NA other downstream 1740936 43774064 ~ 43774425 (-)
G1075399 NA other downstream 1854524 43660559 ~ 43660837 (-)
G1078323 LOC106567565 other upstream 674847 46202604 ~ 46206088 (-)
G1078783 NA other upstream 1288686 46816443 ~ 46817065 (-)
LOC110537706 LOC106567549 other upstream 2386794 47911648 ~ 47942039 (-)
G1081055 NA other upstream 2890664 48418421 ~ 48418884 (-)
G1081571 NA other upstream 3373651 48901408 ~ 48905274 (-)

Expression


Co-expression Network