endou2 (LOC106567496)


Basic Information

Item Value
gene id endou2
gene name LOC106567496
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 52843119 ~ 52851325 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021624136.2
CGCAACCTTTCCAACGAGAACATACAATGCCTTTTCCTTCCACAAGAGTGTGCAAGGGCTGTGCTGTCATTGTCTTTAACACAGAAGGCATTGCTGAGTCAAACAGGTGGCAGAGGAAACCAAGAATGATTGTTGGTCCAAAATTACTGAACTAACATGAGGTGTTAGACATGTTGCTGATTATGgttacattctgaaatcaaaTGTTCTGACTTCGATTAAATCCTGATCACTTAATCAGCCTTTATTTTATTGAAGTCAACCTTCGATTTTAGAATGCAAACATATTTTAATTTCCTGTCATGAGTTTAACAGATGTGTATTAAAACATGTTTTGGATTTATGCCACTCATCTACAAAATGTTTGAGAATTGAGAGCATTGTTGTAACTGTTTGTCATGATCTTACAGACACAGACTACAATGTAACTGTTGTCTTTGATTCAACTGGCCCCTTTAATCTGTCCTTCAGCAGGAACACAGCTTCCCTGGTCTCCATGCCTATCAAGGGACCTTATTTATTACACGCAATAGTTGATCTTATTTATACACACTATTACCATGTGTTTCCACCTGGGAAGGggacagggtgatggagggaCAGGACACAGAGGCAGGAGAAGAACAAAACAGTACTAAAGAAACAAAGAGAGTCCATGTTGTAGCAAGTGATTCAAAAGCCATCAGTACAACACAGTTTAATCCCTTTGCCTAAAGTTGCTGACAGTGGATAACCCTTTAAAATGGCCCCTGTCATGCCTCGTGGTATAGGAGCGCCCCCCCAGCATGTTAGTAAAGATTTGTGCTTTCAAACGGGCCAGTTCCACACGCACAAATTCGGCCACAGGACTGAATCCCCTTAGCTGCCCCAAACCCACAGACCACTTCTCTTTATACGCCGGTGAGCAGGCCAAAGCTGAACAAGAGGAACCTGACCAAGTCAGCTGTAGCCTGCAGAGTAAAGAGGGACCAACCAGTCACATCATGATTGAAGCTGACCGAGAGCTATCAACCATGGTGCAGGATATATGGGATAAAGATGTCAACAGACTGAAACCAGGGACAGACTACCGGATCTCTCTGCAGGGGAAAGCTGGGCCTGTGAATGCTGACATGAATGATGAAATGAGTGATGACAATGATGGAGCCGGATATCCTCTGTTCTCATTTGTCGATGAACGAATTTTCAAAAAGGAGTCTTTCTTAGCCTTTATCTCTCTACTGGATAACTATGAAAGTGATACAGGTGAGCCTGAGATTGTAACCCCAGAGGAGGAAGCAGAAAACCACAAGTTTCTGGACTGCATGCTTCGAACGCCCACCATGAAGATTGCACATAAGTACCTAGTAGAGAAACAGCTCTCCCCAGAGGGATTACCGGAATTCAAGATGCAGCTCTACCGTATCTGGTTTGAGCTGTACGCCAGACGAGGAGCTAGCAAGCCAGACTCCTCAGGGTTTGAGCATGTCTTTGTCGGAGAGACCAGAGGAGGCCGCACAGTCATCGGCTTTCATAACTGGATTCAGTTGTATTTGCAAGAAAAGCTGGGACACATTGATTACAAAGGCTACAGTGTGAACGCAAATTCCCCCCAGCCTGACGAGAACAAGCATATCCTGGCACTACAGTTCAGTTGGAAGAATGGTATTAAACCCAAAGGCAGCATCTTCGTTGGTGTCAGTCCTGAATTTGAGTTTGCCCTTTATACCCTGTGTTTCCTGGTCTCACCCAATGAGCGTGTCAAAGTGTTCTTCAGTATCTATGAGGTGGATATTGTCTGTCACCACTACAACCAGAAGCATATTGGCACAACTTACCCTGTTCTTGTGAAATATCAAAATGAAccaaaaaaacaataaaacgaATCAAACAGGACTCAAATACA

Function

NR:

description
poly(U)-specific endoribonuclease-B-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016788 hydrolase activity, acting on ester bonds molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021624136.2 True 1885 mRNA 0.44 7 52843119 52851325

Neighbor

gene id symbol gene type direction distance location
LOC110537763 rnf14 coding upstream 394 52836678 ~ 52842725 (+)
LOC110537762 LOC106567497 coding upstream 21322 52804227 ~ 52821797 (+)
LOC110537755 LOC106567504 coding upstream 610891 52164071 ~ 52232228 (+)
LOC110537753 LOC106567505 coding upstream 718719 52087532 ~ 52124400 (+)
LOC110537754 LOC106603847 coding upstream 777947 52026941 ~ 52065243 (+)
LOC110537765 LOC106567495 coding downstream 326 52851651 ~ 52861272 (+)
LOC110537768 LOC106567493 coding downstream 153504 53004829 ~ 53132925 (+)
LOC110537771 LOC106567489 coding downstream 478856 53330181 ~ 53419845 (+)
LOC110537774 NA coding downstream 811200 53662525 ~ 53681131 (+)
LOC110537776 LOC106567605 coding downstream 838979 53690304 ~ 53692630 (+)
G1086161 NA non-coding upstream 298750 52544128 ~ 52544369 (+)
G1086152 NA non-coding upstream 305089 52537802 ~ 52538030 (+)
G1086147 NA non-coding upstream 306509 52536379 ~ 52536610 (+)
G1086113 NA non-coding upstream 329078 52513416 ~ 52514041 (+)
G1086112 NA non-coding upstream 330052 52512867 ~ 52513067 (+)
G1086390 NA non-coding downstream 18737 52870062 ~ 52870307 (+)
G1086400 NA non-coding downstream 28218 52879543 ~ 52879750 (+)
G1086404 NA non-coding downstream 33870 52885195 ~ 52885522 (+)
G1086409 NA non-coding downstream 43244 52894569 ~ 52894887 (+)
G1086412 NA non-coding downstream 48019 52899344 ~ 52899557 (+)
G1086237 LOC106567502 other upstream 185624 52649604 ~ 52657495 (+)
G1082266 NA other upstream 3162315 49679023 ~ 49680804 (+)
LOC110537713 LOC106567542 other upstream 3542772 49262142 ~ 49300347 (+)
G1081353 NA other upstream 4095620 48746955 ~ 48747499 (+)
G1077322 NA other upstream 6834510 46004151 ~ 46008609 (+)
G1087914 NA other downstream 1258365 54109690 ~ 54148962 (+)
LOC110538908 LOC106603872 other downstream 1422981 54253719 ~ 54283905 (+)
G1091217 NA other downstream 3874282 56725607 ~ 56726003 (+)
G1091235 NA other downstream 3901093 56752418 ~ 56752947 (+)
LOC110537831 dhx33 other downstream 4264500 57112902 ~ 57118165 (+)

Expression


Co-expression Network