Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110537771 |
| gene name | LOC106567489 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 53330181 ~ 53419845 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| BTB/POZ domain-containing protein KCTD16-like |
| id | name | namespace |
|---|---|---|
| GO:0051260 | protein homooligomerization | biological_process |
| id | description |
|---|---|
| K21918 | KCTD8_12_16; BTB/POZ domain-containing protein KCTD8/12/16 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021624146.2 | True | 4411 | mRNA | 0.44 | 2 | 53330181 | 53419845 |
53,310,000
53,320,000
53,330,000
53,340,000
53,350,000
53,360,000
53,370,000
53,380,000
53,390,000
53,400,000
53,400,000
53,410,000
53,420,000
53,430,000
53,440,000
53,450,000
53,460,000
53,470,000
53,480,000
53,490,000
NC_048576.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537768 | LOC106567493 | coding | upstream | 197256 | 53004829 ~ 53132925 (+) |
| LOC110537765 | LOC106567495 | coding | upstream | 468909 | 52851651 ~ 52861272 (+) |
| endou2 | LOC106567496 | coding | upstream | 478856 | 52843119 ~ 52851325 (+) |
| LOC110537763 | rnf14 | coding | upstream | 487456 | 52836678 ~ 52842725 (+) |
| LOC110537762 | LOC106567497 | coding | upstream | 508384 | 52804227 ~ 52821797 (+) |
| LOC110537774 | NA | coding | downstream | 242680 | 53662525 ~ 53681131 (+) |
| LOC110537776 | LOC106567605 | coding | downstream | 270459 | 53690304 ~ 53692630 (+) |
| LOC100301661 | LOC106567454 | coding | downstream | 381817 | 53801662 ~ 53804908 (+) |
| LOC110538908 | LOC106603872 | coding | downstream | 833874 | 54253719 ~ 54283905 (+) |
| ppp2r2bb | LOC106567445 | coding | downstream | 939428 | 54359273 ~ 54460602 (+) |
| G1086881 | NA | non-coding | upstream | 38872 | 53290715 ~ 53291309 (+) |
| G1086710 | NA | non-coding | upstream | 144163 | 53139050 ~ 53186018 (+) |
| G1086705 | NA | non-coding | upstream | 327951 | 53001922 ~ 53002230 (+) |
| G1086704 | NA | non-coding | upstream | 328347 | 53001524 ~ 53001834 (+) |
| G1086649 | NA | non-coding | upstream | 363834 | 52966086 ~ 52966347 (+) |
| G1087247 | NA | non-coding | downstream | 29089 | 53448934 ~ 53449162 (+) |
| G1087248 | NA | non-coding | downstream | 30826 | 53450671 ~ 53450937 (+) |
| G1087269 | NA | non-coding | downstream | 45486 | 53465331 ~ 53465530 (+) |
| G1087286 | NA | non-coding | downstream | 54872 | 53474717 ~ 53474935 (+) |
| G1087297 | NA | non-coding | downstream | 61696 | 53481541 ~ 53482014 (+) |
| G1086237 | LOC106567502 | other | upstream | 672686 | 52649604 ~ 52657495 (+) |
| G1082266 | NA | other | upstream | 3649377 | 49679023 ~ 49680804 (+) |
| LOC110537713 | LOC106567542 | other | upstream | 4029834 | 49262142 ~ 49300347 (+) |
| G1081353 | NA | other | upstream | 4582682 | 48746955 ~ 48747499 (+) |
| G1077322 | NA | other | upstream | 7321572 | 46004151 ~ 46008609 (+) |
| G1087914 | NA | other | downstream | 689845 | 54109690 ~ 54148962 (+) |
| G1091217 | NA | other | downstream | 3305762 | 56725607 ~ 56726003 (+) |
| G1091235 | NA | other | downstream | 3332573 | 56752418 ~ 56752947 (+) |
| LOC110537831 | dhx33 | other | downstream | 3695980 | 57112902 ~ 57118165 (+) |
