LOC100301661 (LOC106567454)


Basic Information

Item Value
gene id LOC100301661
gene name LOC106567454
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 53801662 ~ 53804908 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021624157.2
TCTACAAGTGAGAGACTTCACTTCAGACACGTCATTGCTGGATGATGAGACTAAAACGGAATCGGGATCTCTTCACAATAACTTCAAAATAAGAATAAAGTAACAAAACAAAAGAGGCACGACATCCAGTGCGTAACGTTTAGGAAAACTCGTAAACTACTCTTATTGTTGTTGATTTAGAGCTTGTGAGAAGATAAACGAGTTGAATTGATTCTATCGGACGGTATTTGCACCTTCTCTGGATGTGGTCGCACGGTTTTTCACGTGAAAGTAGAGTGAATTTCGAAAGGACTTCATTTAATGTTAATTACACAATGCTGGCGGTACTGGGGCTGCATCCGGAACACACgcgaagagaggaggagagcagagaggcgTGCGCTTCTGGTGTATAGATGGGGGGAAGGAGAATAAGTAGAGCCTACTATTTCCATGTAAATAATGGCTTACCATTGAGCTTTCTTTGAGGATTTAACGgcatctgcaaaaaaaaaaacgtttgttTGAAAAAAGTTGACAGCTCATCATCCATGGAGGTTCATTGCAATTTTGGAGACTTGATGTGTGACAAAAACGGACCGCACAAACGGATTGAGCTCCGGGATTACGGTTATGTGTTGCTCCACAGTAAAATGTAGCCTGACATGTTTTATTGGTGCTTATGGAAACTTGAATGCACATTTTTCATAAAACAAAGGCAGAAGCCACGTTTCATGTGTAAAGACACAgacaatgtatttattttgttgtTATGATGCGAATGCATTTCTATTCAACAATGTTTTGGGAGGAGTCGTGATTATGTCTACATTTCTATCACAGTCCAAATCGTCATGCGGTAGGTCCAGTGCATGTGCATTGCAGTTACAAAGTCTAATGCTTGTCCTGGATGGAGTGTCAATAGGAGCACGAATATAATCAGATGGACACGCCTTGTCAGTCATTAAACAAATCAGATAAATGCAGTGCAAATATGATCAATAGATTGTATTGATGAGCCCATATATAAGGCAAATGATTGGCCCAGCCTCTGTTTACATAACATGCCTGCGAGAATATGGTGTGAACGTTTCAGATGACTGCTGACAGCTCATTGAAATAGACATAACATCAAATAAAAAATCAAGTTTAGATTGGTAGCATACATCATATTCAACTCTTCAATAACGGCTGGAATACCTTTTGTTGAAAACTGCTGCTCTAACATTAGAATGTCTTCGAGAATTCATGAACAGGATGATTTTTTTGGCTAATTTCTAACGATTGCTTTTTGAAATATTTATAGACACTATTCTGCAAGATGATCGTTGTGATGAGCATGGTGACccaacctccaaatgagcttgtCCCCAGGCAAGAGGCCAAGGCTACATTTTCCATCTAATTGTCCTGACTTCAGGTGATTGGAATTATGGGGTGATTTCCATCTCTACAAGCTGACAGAAACATGGATTTGAACTTCTCAATGGTCCGTGATATCGATAATTTGCCAGAGAGAAACTCATCCAAGCGTGTTCTGACAGGCTGTTTTCTCTTTGCGCTCATCCTGACCACTCTGCTAGGGAACACACTGGTATGTGTTGCCGTCACCAAGTTCCGCCACCTGCGCTCAAAGGTCACCAACTTCTTTGTGATCTCTTTGGCCATCTCAGACCTGCTGGTGGCCATCTTGGTGATGCCATGGAAGGCAGCGACGGAGATCGTGGGCTTCTGGCCCTTCGGAGCCTTCTGCAACATCTGGGTGGCATTCGACATCATGTGCTCCACAGCGTCCATTTTGAACTTATGTGTCATCAGCGTGGACAGATATTGGGCAATCTCAAGCCCGTTCCGCTATGAGAGGAAGATGACACCCAAGGTGGCATTTATTATGATCAGTGTGGCATGGACTCTGTCCGTGCTTATCTCCTTCATCCCTGTGCAGTTGAACTGGCACAAGGCTGCAGTGTTGGAGCTCAACAGCACTTACGGGGAGCTGCCTCCGGACAATTGCGACTCCAGCCTTAACAGGACTTAtgccatctcctcctccctcatcagcTTCTACATCCCTGTGGCAATCATGATCGTGACTTACACCCGGATTTACAGAATTGCCCAGATACAAATCAGGAGAATCTCAGCCCTGGAGAGGGCTGCGGAGAGTGCCAAGAACCGCCACAGCAGTATGGGGAACAACTCCAACATGGAGACGGAGAGCTCCTTCAAGATGTCTTTCAAAAGAGAAACCAAAGTCCTAAAGACCCTCTCTGTCATAATGGGGGTGTTTGTATGCTGCTGGCTGCCCTTCTTTATCCTCAACTGCATGGTGCCCTTCTGTGAGGCCAACAGCCCCTCTGATTTCTTCTGCATTAGCCCTGCTACATTTGACGTGTTCGTCTGGTTCGGCTGGGCCAACTCCTCACTCAACCCCATCATATATGCCTTCAACGCGGACTTCCGCAAAGCATTCTCCATCCTGCTGGGCTGCCACAGACTCTGCCCGGGCAGCAATGCCATAGAGATAGTGAGCATCAACAACAATGGAGCTCAGCCACCTGCGTCCCAGTATCAGCCTAAAGGGCACATTCCCAAGGAGAGAAACAATGCCACCTATGTGATTCCCCACAGCATCCTGTGTCAGGAGGAGGAGCTGCAGAAGAAGAATGAGGTTGGGATTAAGACCTTGGAGAAACTGTCCCCGCCTCTTTCTGAAAACTTGGACAGCGATGCAGATGTGATTAATCCTATAACTCAGAACGGCCAACACAAAACTGTGAGATGTTGATTGGTGTATGTATTGGTATACAAAAATAGAAGGAACCCACAGAGGGAGAGACCAGGCAGAATGCCTAGCAAAAGTGTGGGGTATACAAACTGAGCTTCACTGCAAACCTTAAATCTCTAATCACTATAGAAATCTACAGAATGTTTCAAAATGAAGGCACTTTATCCTGGTTAACTATCTGCAAAACACCTTCAGCATTTATTAATGAAGTATAGACAGATTTGTTGATAAATGTTCCATAACTTgaataaagaaaaaataaatacacacatgTATACGTGTGTTGTATTTACAAATACGTATACATTTGCATATATGTACAGTAGTGATGTTACAAATATCCTGGATGCCATTATAACATGGAGAAAGAAGTAGAAATATTAGCTAAATGTCTTGTAAGTGCTTTACATTTATGTATACAGTGTGTTTCATATTCTCCGTTGAACTATAAAGATAATTGGTTTTGCTAAAAAACATTAT

Function

NR:

description
D(1)-like dopamine receptor

GO: NA

KEGG:

id description
K04144 DRD1; dopamine receptor D1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021624157.2 True 3247 mRNA 0.43 1 53801662 53804908

Neighbor

gene id symbol gene type direction distance location
LOC110537776 LOC106567605 coding upstream 109032 53690304 ~ 53692630 (+)
LOC110537774 NA coding upstream 120531 53662525 ~ 53681131 (+)
LOC110537771 LOC106567489 coding upstream 381817 53330181 ~ 53419845 (+)
LOC110537768 LOC106567493 coding upstream 668737 53004829 ~ 53132925 (+)
LOC110537765 LOC106567495 coding upstream 940390 52851651 ~ 52861272 (+)
LOC110538908 LOC106603872 coding downstream 448811 54253719 ~ 54283905 (+)
ppp2r2bb LOC106567445 coding downstream 554365 54359273 ~ 54460602 (+)
LOC110537791 LOC106567438 coding downstream 1074765 54879673 ~ 54888634 (+)
LOC100136153 LOC100136153 coding downstream 1242252 55047160 ~ 55052488 (+)
LOC110537795 ablim3 coding downstream 1260213 55065121 ~ 55209632 (+)
G1087637 NA non-coding upstream 8135 53793264 ~ 53793527 (+)
G1087514 rad50 non-coding upstream 50055 53740504 ~ 53751607 (+)
G1087512 NA non-coding upstream 71276 53729574 ~ 53730386 (+)
G1087459 NA non-coding upstream 178542 53622389 ~ 53623120 (+)
G1087458 NA non-coding upstream 179539 53621834 ~ 53622123 (+)
G1087649 NA non-coding downstream 2491 53807399 ~ 53809011 (+)
G1087652 NA non-coding downstream 5291 53810199 ~ 53810423 (+)
G1087665 NA non-coding downstream 21091 53825999 ~ 53826202 (+)
G1087681 NA non-coding downstream 23505 53828413 ~ 53828613 (+)
G1087721 NA non-coding downstream 54726 53859634 ~ 53859836 (+)
G1086237 LOC106567502 other upstream 1144167 52649604 ~ 52657495 (+)
G1082266 NA other upstream 4120858 49679023 ~ 49680804 (+)
LOC110537713 LOC106567542 other upstream 4501315 49262142 ~ 49300347 (+)
G1081353 NA other upstream 5054163 48746955 ~ 48747499 (+)
G1077322 NA other upstream 7793053 46004151 ~ 46008609 (+)
G1087914 NA other downstream 304782 54109690 ~ 54148962 (+)
G1091217 NA other downstream 2920699 56725607 ~ 56726003 (+)
G1091235 NA other downstream 2947510 56752418 ~ 56752947 (+)
LOC110537831 dhx33 other downstream 3310917 57112902 ~ 57118165 (+)

Expression


Co-expression Network