LOC100136153 (LOC100136153)


Basic Information

Item Value
gene id LOC100136153
gene name LOC100136153
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 55047160 ~ 55052488 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021622407.2
agtggtgtttTAGAACACAGAGCAAAGTGGGACTGTGAGTGTGTGACACAGCaaaagaggaagggagaaggCAGTCAGCCAAAAACATTTCGAATGAAGTACAAACGCATAATGGGAGCTACAACATAAAAAAAAGGAATACTTTTAGATTTTATGGGAGACCAGGAGAACATTTGGAGATCATGGAGAGTGTGAGCACGCCTGCCGTGTTCAACCTATCAGATCTATCAGTGGAGATGAACTCATCGTCTCGCCAGTGGTCTTACTCGGAGTACAGCGAGGCTGTAGCGGTGCTACTAGGCATCCTCATGGCCCTGCTAGTGATGTGCATCGTCTTTGGCAACGTGCTGGTCATCACCGCCATCGTGCGCTTCCAGCGGCTGCAGACGGTCACCAACATGTTCATCACCTCTCTGGCCTGTGCTGACCTGGTCATGGGCCTGCTGGTGGTGCCCTTCGGCGCCTGCTACATCCTCCTCAACACCTGGCACTTTGGCAGCTTTCTCTGTGAGTTCTGGACGGCGGCGGATGTCTTGTGTGTGACGGCCAGCATCGAGACGCTGTGTGTGATCGCACTGGACCGCTACCTGGCCATCACGTCGCCGCTGCGCTACCCATCCCTACTGACCAAGCGCAAGGCGTGCGTGGTGGTGGTGACGGTGTGGGGGGTGGCCGCCCTCATCTCCTTCCTGCCCATCCACATGAAGTGGTGGGTGTCTGATGAGCCCGAGGCGCTCAGCTGCCTGGAAGATGCTCACTGCTGTGACTTCAACACCAACGCTGCCTACGCCGTAGCCTCCTCCGTCGTCTCCTTCTACATCCCCCTGGCGGTCATGGCCTTTGTCTACGGACGCGTCTTCCAGGAGGCCAGGAAGCAGCTGGAGAAGATCCGTGGCAGCGAGGGGCGCTTCCATGCCCAGATGATTGACAACAACCAGGGGCAGGATGGTGGGGACGGGAGCGGCGGAGGAGGGGGGAACGGAAAGAGACCTAAGTTCTGTCTGAAGGAACACAAAGCCCTAAAGACGCTGGGAATCATCATGGGCACCTTTACCCTCTGCTGGCTGCCCTTCTTTGTGCTCAATGTGGTGGTGACCATCTGGAAGGTGGACAACATTAAAATGCCTTTCAGGATATTAAACTGGATAGGATACGCCAACTCAGCGTTCAACCCCCTCATATACTGCAGGAGTCCTGAGTTCAGGTATGCCTTCCAGGAGATTCTGTGCCTGAGAGGGGCTGCTTTCCCCACCAATGGATACATATATAGGGGTCACAGCTTGCGCCTAAGCCCCAAGGACAAGCCAGGCAGTCTTTCACATAATGTTGGGACCGTGGAGCTGGGCTCTCTGTCTAGTGTCACCAACATAAACGGGTATTGCAATAATCCTCCTCTTGCCTCCATTGTCTGAAGCGCAGGGTGTTACAATGAGACTTGTCTTTCTCGTTTAGTCAGACCCGGTATGCAGACACGGGATAGGAAATGACATGTGAATCTATTTCCATATTTAAATGCATTACTATAAGAATATTATTCTAGTAATGTGTAGGTTATTAAATGTTTAATACTTTCCCTCTTAATATTGAACAAAGTCTGCAAAATACATAGGAAGTCTATGGTTTGCGGATgtaatcatgtgtgtgtatgtgtgtggtttgtgGACATGAGTACGTGCACATGTTATGTTCTCTAGTGCTTACTCCTGTGTGCAAATGAACACCACGGTTCAGGTACTAGGTTCAAGTTTCAAGTTCAGTTGCACAAACATTTGTTATATTGTTCTAAGTTAAAAACAAATTACCTCATCAGCATCATTTTCGATTCAGCTCCTTATCTTAGAGCTCCGAGAACAAATAATTATAGTCTGTTTGTATGTTGTATGAAAAATGAATAATGTTGTTAGTTGAACTGACTGTTCTTTACTGGCAGCGGGCTGAATGAGATGGAAATGCCAGGGTAGGAGAGGTAGGAGAGAATTAACAGGCAGAACAAGAGATCAAATCAGGGTTAACAGTAATATCTGTGACCCCCACTACTGGCTGTAGCCAGCTCTCTGTATGTAACACATTCCATATTGATCTGGGTCTCTCCCAGAGCCAGCTCAGGGACTTCTGTCTGTGTGATTCTATACACTCCCTCTGCCATGGCCCAGAAATCCAACTCTGATGAGGGACAGCAGGTGCACATAATCACAGGCAGGCGCTATTACCAGCTACACCACACACGTTGCCCCATTCCTCCAACCACTCTTCAATACCTCAACCTTCACCCCCCCCCAATATCACCATTTCATAACTGAGGTTACAGACGCCTGTCCTGTCGCCTCTCAGACAGTGAAtaaggacacacagacagaagccTTTAGTGTGGACCTTACTTTTGTGACTCAGTAACCCCTTGCAAGTACAGTGGTCAGAGCAGCAATACCTTAATGCTGGGTAGTGTGGCCACCACTGTACGTCATTCTGATACCAATATCCAGCCAGTATACTTAGTCTGTAAAGCTATGTTTAGGGATTGCTTTCACACTCTACCGTGCTGGTTTTCTTTTAAATGACTAGCGTGGATACTGAGAACTGTTGCTGATGTTATTGTGCTGCTCTCCGTTAATGTTGCTCTTGTGTTGTTGCTGTGAAGTTTCAGTGTTTACAGAGATTCCTGGACAAACTGTCTGATTGGGGATACAATTAAAGTGTACCATACATTTACACAATGTACTGACTAGCTAAAAAATATAAGGAAATAAACCCCTACACTATAGCATCGGCATAACCTGCACACATTCTTGTCTGAGGAAGATAAACTGTAAGATTTTCAGAGCAATTTACAGAAGCAATTCTacgtgtcttgctcaagggcacatcagatTTTTCACCATAGTcacctcagggatttgaaccagaaaCCTTCCAGCTACTGGACCAATGCTCTTAAaagctaggctatctgccgccacAGTAGTGATGAATGATGTAGGAGTCTGGGTGGATTTTGTCCAGGTGTTAATGAATAGAAACCTTGGTATCACATTCAGGCTGTAATGAACTAGGTTAACGGTGTAGCACACAGTGTACTTGCACTACAATGTATTCGCAGACTGCATCATGTCAGCCAAGTGAAAAAAGTTAATCTAAAATGTTCACTTGCTGTAAATGTTCATaattatttaaaacatttcttAGTATATAGGCCTATACTAAATCCTATTACTTTACAATTGTTTGGAtagctatgtgtgtgtatgtgtctgtctgtatgtacctGTGCTAACTGTATGAGTATGACTGTGTTTAGACAATTTTTGAAGCTTTGAATTCATAGGAAAAGATGACGTACCGTGTGTGGTAACTCACAAACCCACCCCCTTTTTTTATGGACACGAGGACACTTtgatgtatgtactgtacatgtgaatAATGTATTATCCTAACATCGCAAAATGT
>XM_036936676.1
agtggtgtttTAGAACACAGAGCAAAGTGGGACTGTGAGTGTGTGACACAGCaaaagaggaagggagaaggCAGTCAGCCAAAAACATTTCGAATGAAGTACAAACGCATAATGGGAGCTACAACATAAAAAAAAGGAATACTTTTAGATTTTATGGGAGACCAGGAGAACATTTGGAGatgaagatcagatcaaatcggatgaccaatttatgcagaaatccagATCATGGAGAGTGTGAGCACGCCTGCCGTGTTCAACCTATCAGATCTATCAGTGGAGATGAACTCATCGTCTCGCCAGTGGTCTTACTCGGAGTACAGCGAGGCTGTAGCGGTGCTACTAGGCATCCTCATGGCCCTGCTAGTGATGTGCATCGTCTTTGGCAACGTGCTGGTCATCACCGCCATCGTGCGCTTCCAGCGGCTGCAGACGGTCACCAACATGTTCATCACCTCTCTGGCCTGTGCTGACCTGGTCATGGGCCTGCTGGTGGTGCCCTTCGGCGCCTGCTACATCCTCCTCAACACCTGGCACTTTGGCAGCTTTCTCTGTGAGTTCTGGACGGCGGCGGATGTCTTGTGTGTGACGGCCAGCATCGAGACGCTGTGTGTGATCGCACTGGACCGCTACCTGGCCATCACGTCGCCGCTGCGCTACCCATCCCTACTGACCAAGCGCAAGGCGTGCGTGGTGGTGGTGACGGTGTGGGGGGTGGCCGCCCTCATCTCCTTCCTGCCCATCCACATGAAGTGGTGGGTGTCTGATGAGCCCGAGGCGCTCAGCTGCCTGGAAGATGCTCACTGCTGTGACTTCAACACCAACGCTGCCTACGCCGTAGCCTCCTCCGTCGTCTCCTTCTACATCCCCCTGGCGGTCATGGCCTTTGTCTACGGACGCGTCTTCCAGGAGGCCAGGAAGCAGCTGGAGAAGATCCGTGGCAGCGAGGGGCGCTTCCATGCCCAGATGATTGACAACAACCAGGGGCAGGATGGTGGGGACGGGAGCGGCGGAGGAGGGGGGAACGGAAAGAGACCTAAGTTCTGTCTGAAGGAACACAAAGCCCTAAAGACGCTGGGAATCATCATGGGCACCTTTACCCTCTGCTGGCTGCCCTTCTTTGTGCTCAATGTGGTGGTGACCATCTGGAAGGTGGACAACATTAAAATGCCTTTCAGGATATTAAACTGGATAGGATACGCCAACTCAGCGTTCAACCCCCTCATATACTGCAGGAGTCCTGAGTTCAGGTATGCCTTCCAGGAGATTCTGTGCCTGAGAGGGGCTGCTTTCCCCACCAATGGATACATATATAGGGGTCACAGCTTGCGCCTAAGCCCCAAGGACAAGCCAGGCAGTCTTTCACATAATGTTGGGACCGTGGAGCTGGGCTCTCTGTCTAGTGTCACCAACATAAACGGGTATTGCAATAATCCTCCTCTTGCCTCCATTGTCTGAAGCGCAGGGTGTTACAATGAGACTTGTCTTTCTCGTTTAGTCAGACCCGGTATGCAGACACGGGATAGGAAATGACATGTGAATCTATTTCCATATTTAAATGCATTACTATAAGAATATTATTCTAGTAATGTGTAGGTTATTAAATGTTTAATACTTTCCCTCTTAATATTGAACAAAGTCTGCAAAATACATAGGAAGTCTATGGTTTGCGGATgtaatcatgtgtgtgtatgtgtgtggtttgtgGACATGAGTACGTGCACATGTTATGTTCTCTAGTGCTTACTCCTGTGTGCAAATGAACACCACGGTTCAGGTACTAGGTTCAAGTTTCAAGTTCAGTTGCACAAACATTTGTTATATTGTTCTAAGTTAAAAACAAATTACCTCATCAGCATCATTTTCGATTCAGCTCCTTATCTTAGAGCTCCGAGAACAAATAATTATAGTCTGTTTGTATGTTGTATGAAAAATGAATAATGTTGTTAGTTGAACTGACTGTTCTTTACTGGCAGCGGGCTGAATGAGATGGAAATGCCAGGGTAGGAGAGGTAGGAGAGAATTAACAGGCAGAACAAGAGATCAAATCAGGGTTAACAGTAATATCTGTGACCCCCACTACTGGCTGTAGCCAGCTCTCTGTATGTAACACATTCCATATTGATCTGGGTCTCTCCCAGAGCCAGCTCAGGGACTTCTGTCTGTGTGATTCTATACACTCCCTCTGCCATGGCCCAGAAATCCAACTCTGATGAGGGACAGCAGGTGCACATAATCACAGGCAGGCGCTATTACCAGCTACACCACACACGTTGCCCCATTCCTCCAACCACTCTTCAATACCTCAACCTTCACCCCCCCCCAATATCACCATTTCATAACTGAGGTTACAGACGCCTGTCCTGTCGCCTCTCAGACAGTGAAtaaggacacacagacagaagccTTTAGTGTGGACCTTACTTTTGTGACTCAGTAACCCCTTGCAAGTACAGTGGTCAGAGCAGCAATACCTTAATGCTGGGTAGTGTGGCCACCACTGTACGTCATTCTGATACCAATATCCAGCCAGTATACTTAGTCTGTAAAGCTATGTTTAGGGATTGCTTTCACACTCTACCGTGCTGGTTTTCTTTTAAATGACTAGCGTGGATACTGAGAACTGTTGCTGATGTTATTGTGCTGCTCTCCGTTAATGTTGCTCTTGTGTTGTTGCTGTGAAGTTTCAGTGTTTACAGAGATTCCTGGACAAACTGTCTGATTGGGGATACAATTAAAGTGTACCATACATTTACACAATGTACTGACTAGCTAAAAAATATAAGGAAATAAACCCCTACACTATAGCATCGGCATAACCTGCACACATTCTTGTCTGAGGAAGATAAACTGTAAGATTTTCAGAGCAATTTACAGAAGCAATTCTacgtgtcttgctcaagggcacatcagatTTTTCACCATAGTcacctcagggatttgaaccagaaaCCTTCCAGCTACTGGACCAATGCTCTTAAaagctaggctatctgccgccacAGTAGTGATGAATGATGTAGGAGTCTGGGTGGATTTTGTCCAGGTGTTAATGAATAGAAACCTTGGTATCACATTCAGGCTGTAATGAACTAGGTTAACGGTGTAGCACACAGTGTACTTGCACTACAATGTATTCGCAGACTGCATCATGTCAGCCAAGTGAAAAAAGTTAATCTAAAATGTTCACTTGCTGTAAATGTTCATaattatttaaaacatttcttAGTATATAGGCCTATACTAAATCCTATTACTTTACAATTGTTTGGAtagctatgtgtgtgtatgtgtctgtctgtatgtacctGTGCTAACTGTATGAGTATGACTGTGTTTAGACAATTTTTGAAGCTTTGAATTCATAGGAAAAGATGACGTACCGTGTGTGGTAACTCACAAACCCACCCCCTTTTTTTATGGACACGAGGACACTTtgatgtatgtactgtacatgtgaatAATGTATTATCCTAACATCGCAAAATGT
>NM_001124440.1
ATGGAGAGTGTGAGCACGCCTGCCGTGTTCAACCTATCAGATCTATCAGTGGAGATGAACTCATCGTCTCGCCAGTGGTCTTACTCGGAGTACAGCGAGGCTGTAGCGGTGCTACTAGGCATCCTCATGGCCCTGCTAGTGATGTGCATCGTCTTTGGCAACGTGCTGGTCATCACCGCCATCGTGCGCTTCCAGCGGCTGCAGACGGTCACCAACATGTTCATCACCTCTCTGGCCTGTGCTGACCTGGTCATGGGCCTGCTGGTGGTGCCCTTCGGCGCCTGCTACATCCTCCTCAACACCTGGCACTTTGGCAGCTTTCTCTGTGAGTTCTGGACGGCGGCGGATGTCTTGTGTGTGACGGCCAGCATCGAGACGCTGTGTGTGATCGCACTGGACCGCTACCTGGCCATCACGTCGCCGCTGCGCTACCCATCCCTACTGACCAAGCGCAAGGCGTGCGTGGTGGTGGTGACGGTGTGGGGGGTGGCCGCCCTCATCTCCTTCCTGCCCATCCACATGAAGTGGTGGGTGTCTGATGAGCCCGAGGCGCTCAGCTGCCTGGAAGATGCTCACTGCTGTGACTTCAACACCAACGCTGCCTACGCCGTAGCCTCCTCCGTCGTCTCCTTCTACATCCCCCTGGCGGTCATGGCCTTTGTCTACGGACGCGTCTTCCAGGAGGCCAGGAAGCAGCTGGAGAAGATCCGTGGCAGCGAGGGGCGCTTCCATGCCCAGATGATTGACAACAACCAGGGGCAGGATGGTGGGGACGGGAGCGGCGGAGGAGGGGGGAACGGAAAGAGACCTAAGTTCTGTCTGAAGGAACACAAAGCCCTAAAGACGCTGGGAATCATCATGGGCACCTTTACCCTCTGCTGGCTGCCCTTCTTTGTGCTCAATGTGGTGGTGACCATCTGGAAGGTGGACAACATTAAAATGCCTTTCAGGATATTAAACTGGATAGGATACGCCAACTCAGCGTTCAACCCCCTCATATACTGCAGGAGTCCTGAGTTCAGGTATGCCTTCCAGGAGATTCTGTGCCTGAGAGGGGCTGCTTTCCCCACCAATGGATACATATATAGGGGTCACAGCTTGCGCCTAAGCCCCAAGGACAAGCCAGGCAGTCTTTCACATAATGTTGGGACCGTGGAGCTGGGCTCTCTGTCTAGTGTCACCAACATAAACGGGTATTGCAATAATCCTCCTCTTGCCTCCATTGTCTGA

Function

NR:

description
beta-2 adrenergic receptor isoform X1

GO:

id name namespace
GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway biological_process
GO:0007190 activation of adenylate cyclase activity biological_process
GO:0002027 regulation of heart rate biological_process
GO:0006940 regulation of smooth muscle contraction biological_process
GO:0071875 adrenergic receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004941 beta2-adrenergic receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021622407.2 False 3444 mRNA 0.46 2 55047160 55052488
XM_036936676.1 False 3490 mRNA 0.46 3 55047160 55052488
NM_001124440.1 True 1230 mRNA 0.57 1 55049227 55050456

Neighbor

gene id symbol gene type direction distance location
LOC110537791 LOC106567438 coding upstream 158526 54879673 ~ 54888634 (+)
ppp2r2bb LOC106567445 coding upstream 586558 54359273 ~ 54460602 (+)
LOC110538908 LOC106603872 coding upstream 766203 54253719 ~ 54283905 (+)
LOC100301661 LOC106567454 coding upstream 1242252 53801662 ~ 53804908 (+)
LOC110537776 LOC106567605 coding upstream 1354530 53690304 ~ 53692630 (+)
LOC110537795 ablim3 coding downstream 12633 55065121 ~ 55209632 (+)
LOC110537794 afap1l1 coding downstream 157242 55209730 ~ 55247859 (+)
LOC110537796 LOC106567431 coding downstream 204946 55257434 ~ 55270161 (+)
LOC110537797 nola2 coding downstream 229243 55281731 ~ 55285435 (+)
LOC110537800 LOC106567427 coding downstream 323533 55376021 ~ 55398512 (+)
G1089013 NA non-coding upstream 19272 55027664 ~ 55027888 (+)
G1089011 NA non-coding upstream 22087 55024808 ~ 55025073 (+)
G1088992 NA non-coding upstream 45729 54992764 ~ 55001431 (+)
G1088883 NA non-coding upstream 128164 54890174 ~ 54918996 (+)
G1088896 NA non-coding upstream 157590 54867931 ~ 54889570 (+)
G1089056 NA non-coding downstream 61706 55114194 ~ 55114513 (+)
G1088894 NA non-coding downstream 137262 55189750 ~ 55205645 (+)
G1088887 NA non-coding downstream 141047 55193535 ~ 55196940 (+)
G1089159 LOC106567483 non-coding downstream 272121 55324609 ~ 55325524 (+)
G1087914 NA other upstream 898198 54109690 ~ 54148962 (+)
G1086237 LOC106567502 other upstream 2389665 52649604 ~ 52657495 (+)
G1082266 NA other upstream 5366356 49679023 ~ 49680804 (+)
LOC110537713 LOC106567542 other upstream 5746813 49262142 ~ 49300347 (+)
G1091217 NA other downstream 1673119 56725607 ~ 56726003 (+)
G1091235 NA other downstream 1699930 56752418 ~ 56752947 (+)
LOC110537831 dhx33 other downstream 2063337 57112902 ~ 57118165 (+)
LOC110537841 mtmr4 other downstream 2846983 57893341 ~ 58071571 (+)
LOC118937686 NA other downstream 3163667 58216142 ~ 58222215 (+)

Expression


Co-expression Network