adra1ba (LOC106567426)


Basic Information

Item Value
gene id adra1ba
gene name LOC106567426
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 55600352 ~ 55616323 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021624204.2
GGGTCGTCAACATGAATTTTGATACTGCTGATGAAGTCAACTTCTGGAGTAACCGTTCCTCGGAGCTGTACTCGGAGACACAGGGACCATTATCTGCAAATAATTCCAACTTGACCACAGCAAATGGCACAGACAATAACACAGACACGAATCCGCTGGACCTTACCCGAGCCGTGTCCGTTGGTATAGTTCTGGGCGCGTTCATTCTGTTCGCAATCGTGGGCAACATACTCGTAATACTTTCCGTTGTATGCAACAGACACCTGCGCATCCCAACAAACTATTTCATTATCAACCTCGCCATTGCGGACCTGTTGCTGGGTACAACGGTGCTGCCCGTGTCTGCAACATTGGAGATTCTTGACTACTGGGTATTCGGGAGGATATTCTGTGACATCTGGGCGGCAGTGGACGTGCTATGTTGCACTGCTTCCATTATGAGCCTGTGCGTAATATCCATAGACCGTTATATAGGAGTGCGCTACCCACTGCAGTACCCCTGTATAGTAACGGAGAAAAGAGCCCTTTTGGCCATGCTCGGTGTTTGGGTTCTCGCTACTGTCATTTCCATTGGACCTCTGCTCGGGTGGAAACAACCACCCTCAAATGACGACACCATTTGCCCCATCACCGAAGAGCCCTTTTACGCACTGTTCTCGTCATTGGGTTCCTTTTACATACCTCTGGCTGTCATCCTTTGCATGTACTGTCAGGTTTATGTAGTTGCCAAACGGACCACTAAGAACTTAGAGGCGGGGGTCATGAAAGAACACATGGACTCGAATGAGCTCACGCTCAGGATCCACTGCAAAAACGCACAACTACAGGAATACTGCGGCGCAGGCAAGGGCCAGACACGGAGCACGCTAACAGTCAAACTGCTCAAGTTCTCCCGAGAGAAGAAAGCTGCTAAAACGCTCGGTGTCGTGGTGGGCATGTTTATTCTCTGCTGGCTGCCATTCTTCCTCGTGCTGCCCATCGGGTCATTCAACGCCAACCTGCGTCCCCCGGAGACGTTCTTTAAGGTGATCTTCTGGCTGGGCTACTTCAACAGCTGCCTGAATCCCATCATCTACCCCTGCTACAGCCGAGAGTTCAAACAGGCCTTCATCCGCATCCTCAAGTGCCGCTGCCATCAGAAGAAAAAGCAGAAGGGCTGGAGGGCCTACTACAACTACCGTTCCTCTCACCTGGGCTCCACCAACAACTCCTACCTGAATGGGAGTCAGCAGACCCTGTCCTCTGTCAACCCCAGCCCTCGCTGTGTGAGCAAAGGATCCGGCTCTCACCTGGAGTCTGGGTGGGGCCATGGCTCCCTGTCCCCctgcctgtctctgcctgggAGCCCCTTCACCAGCCAGATGAGGGCCCTTCCTGGGGCTGTCCGCCAGAGCACCAGCAGAACTATCAGAGTCAACCTGGCCTCTCCCCTGGCCAGGGAGCCAGTGCATGCCAATGGACAGAGTGGGAATGGAAAGGTGGAGCATGGGGCAATCCGGGGAACACCTGAGACAATAATGTAATGGCGGGTTGGAGCATCAGTCAAATGCCTGGACAATGCCGTTTGATAGTCTGTACTTATGCAACGGTAGCCTTTACATCCAGGTGCATGTGGGTATTTTATACTGGATGCTGAAATATGGACAAAGGCCTAACTACTGTAGCAGTCTGGATTTAAGATTTACGCATCACACCAGAGGGTCAATGGTCAATGTGTCCGTAAGTATTTATTACTAAAAGTCTGATTGCTTGTAGTTCCATGTCCTCCAAATGTCCTTTTAaataattatttgtattattaaagGATACTTTTAGACAGAACACTGAAGGCCTCTGCTACTGCACAAAACCTTTTCAGAATAACATGTGCAGCTCTGGCACAtacaactttttatttttatcgttttggtactattttcacaaTTTTGATGTGAATTTTCaaaactcttagtacaaaactcaaaaTGGGTAGCACTTGTAATGCAGCCTGTCTTAATTCAAACCCTTTCATTGTCCATTTATTTCATTTGTAGACCTCTTTTACCACACAACCATTGATCCACAATATAGGTTAACTCTGACATATACATTGTTTTAATCATCAAAACAAAACATAATAATATCTTCTCAATTTAGTTATTTTAAATACCAGTTAATCCACTAGCAAAACATCTTAGACACGTGTttctatcacgtttcaggtaagatccaaatgcagactgtgttgtTGTAACAATGTTTAgcacagcaacaggggcaggcaaatgacaggtcaggT

Function

NR:

description
alpha-1A adrenergic receptor-like

GO: NA

KEGG:

id description
K04136 ADRA1B; adrenergic receptor alpha-1B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021624204.2 True 2278 mRNA 0.48 2 55600352 55616323

Neighbor

gene id symbol gene type direction distance location
LOC110537802 LOC106603906 coding upstream 145016 55451594 ~ 55455336 (+)
LOC110537801 LOC106603903 coding upstream 187054 55398975 ~ 55413298 (+)
LOC110537800 LOC106567427 coding upstream 201840 55376021 ~ 55398512 (+)
LOC110537797 nola2 coding upstream 314917 55281731 ~ 55285435 (+)
LOC110537796 LOC106567431 coding upstream 330191 55257434 ~ 55270161 (+)
ttc1 LOC106567425 coding downstream 9038 55625361 ~ 55643340 (+)
LOC110537810 LOC106567475 coding downstream 50350 55666673 ~ 55668162 (+)
prob1 LOC106567422 coding downstream 88256 55704341 ~ 55714760 (+)
LOC110537815 NA coding downstream 175790 55792113 ~ 55846902 (+)
LOC110537817 LOC106567419 coding downstream 264748 55881071 ~ 55889473 (+)
G1089281 LOC106567478 non-coding upstream 78541 55519574 ~ 55521811 (+)
G1089284 LOC106567478 non-coding upstream 85221 55513630 ~ 55515131 (+)
G1089209 NA non-coding upstream 175149 55420871 ~ 55425203 (+)
G1089206 NA non-coding upstream 184543 55415326 ~ 55415809 (+)
G1089812 NA non-coding downstream 53281 55669604 ~ 55670058 (+)
G1089813 NA non-coding downstream 55790 55672113 ~ 55672822 (+)
G1089814 LOC106567423 non-coding downstream 57461 55673784 ~ 55674562 (+)
G1089815 NA non-coding downstream 59066 55675389 ~ 55675627 (+)
G1089817 ccnjl non-coding downstream 60641 55676964 ~ 55677399 (+)
LOC110538908 LOC106603872 other upstream 1319631 54253719 ~ 54283905 (+)
G1087914 NA other upstream 1451390 54109690 ~ 54148962 (+)
G1086237 LOC106567502 other upstream 2942857 52649604 ~ 52657495 (+)
G1082266 NA other upstream 5919548 49679023 ~ 49680804 (+)
LOC110537713 LOC106567542 other upstream 6300005 49262142 ~ 49300347 (+)
G1091217 NA other downstream 1109284 56725607 ~ 56726003 (+)
G1091235 NA other downstream 1136095 56752418 ~ 56752947 (+)
LOC110537831 dhx33 other downstream 1499502 57112902 ~ 57118165 (+)
LOC110537841 mtmr4 other downstream 2283148 57893341 ~ 58071571 (+)
LOC118937686 NA other downstream 2599832 58216142 ~ 58222215 (+)

Expression


Co-expression Network