LOC110537810 (LOC106567475)


Basic Information

Item Value
gene id LOC110537810
gene name LOC106567475
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 55666673 ~ 55668162 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021624208.1
TTATGTGCCAAAGGTGAGTGACCCCATGGTCACCAACTCTCTGATGGCACCATAACAGTTTATGGCGTAGTGATGTACCCATTGTAATGAAAGAAGGGCGGAGATGGTTGCCATGTCTATTTAAAGAGGGACAGGTTGTCACTCAGTATCTGACTCTTCCCTGCAGGTCTTGGAactgcttctccctctcctttaccTCTCCTTTGCTTTCTGTACACCATGGCCTTCGCTGGAAAATGGGAAACTGAGTCCCAGGAAGGATACGATGAATTCTGCAAGCTCCTTGGCATCCCTGATGACATCATTGAGAAGGGTCGTGACTACAAGCTCATTACTGAGGTGGTGCAGAACGGCAATGTGTTCTCATGGTCCCAGCTCTATCCCACAAACAAGACCATCAGCAACAAGTTTGTCATTGACCAGGAATGTGACATGGAGACTATTGGAGGGAAAAAGTTCAAGGCCACAGTTACAATGGAGGGGGGCAAGCTGAGCACGAAATTCCCCAACTACCACCACACATCTGAAATCAGCGGAGGAAAGCTGATAGAGACCTCAATCGCGGGCTCAGTCGTGCTGAAAAGAACCAGCAAGAAGATCTAAACACATTGTGACCGTGCCATTAGCAAAAAAACAAACGGAATAATGAGTAAATAAAGTAAGACTGCTTAGCCAA

Function

NR:

description
gastrotropin-like

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005215 transporter activity molecular_function
GO:0008289 lipid binding molecular_function

KEGG:

id description
K08755 FABP6; fatty acid-binding protein 6, ileal (gastrotropin)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021624208.1 True 676 mRNA 0.47 4 55666673 55668162

Neighbor

gene id symbol gene type direction distance location
ttc1 LOC106567425 coding upstream 23333 55625361 ~ 55643340 (+)
adra1ba LOC106567426 coding upstream 50350 55600352 ~ 55616323 (+)
LOC110537802 LOC106603906 coding upstream 211337 55451594 ~ 55455336 (+)
LOC110537801 LOC106603903 coding upstream 253375 55398975 ~ 55413298 (+)
LOC110537800 LOC106567427 coding upstream 268161 55376021 ~ 55398512 (+)
prob1 LOC106567422 coding downstream 36417 55704341 ~ 55714760 (+)
LOC110537815 NA coding downstream 123951 55792113 ~ 55846902 (+)
LOC110537817 LOC106567419 coding downstream 212909 55881071 ~ 55889473 (+)
LOC100136702 LOC100136702 coding downstream 585764 56253926 ~ 56255161 (+)
LOC110537822 NA coding downstream 904263 56572425 ~ 56574595 (+)
G1089281 LOC106567478 non-coding upstream 144862 55519574 ~ 55521811 (+)
G1089284 LOC106567478 non-coding upstream 151542 55513630 ~ 55515131 (+)
G1089209 NA non-coding upstream 241470 55420871 ~ 55425203 (+)
G1089206 NA non-coding upstream 250864 55415326 ~ 55415809 (+)
G1089196 NA non-coding upstream 279153 55386158 ~ 55387520 (+)
G1089812 NA non-coding downstream 1442 55669604 ~ 55670058 (+)
G1089813 NA non-coding downstream 3951 55672113 ~ 55672822 (+)
G1089814 LOC106567423 non-coding downstream 5622 55673784 ~ 55674562 (+)
G1089815 NA non-coding downstream 7227 55675389 ~ 55675627 (+)
G1089817 ccnjl non-coding downstream 8802 55676964 ~ 55677399 (+)
LOC110538908 LOC106603872 other upstream 1385952 54253719 ~ 54283905 (+)
G1087914 NA other upstream 1517711 54109690 ~ 54148962 (+)
G1086237 LOC106567502 other upstream 3009178 52649604 ~ 52657495 (+)
G1082266 NA other upstream 5985869 49679023 ~ 49680804 (+)
LOC110537713 LOC106567542 other upstream 6366326 49262142 ~ 49300347 (+)
G1091217 NA other downstream 1057445 56725607 ~ 56726003 (+)
G1091235 NA other downstream 1084256 56752418 ~ 56752947 (+)
LOC110537831 dhx33 other downstream 1447663 57112902 ~ 57118165 (+)
LOC110537841 mtmr4 other downstream 2231309 57893341 ~ 58071571 (+)
LOC118937686 NA other downstream 2547993 58216142 ~ 58222215 (+)

Expression


Co-expression Network