Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110538909 |
| gene name | ankfy1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 56615568 ~ 56657551 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| ankfy1 | Predicted to enable metal ion binding activity. Orthologous to human ANKFY1 (ankyrin repeat and FYVE domain containing 1). |
| description |
|---|
| PREDICTED: rabankyrin-5 isoform X1 |
| id | description |
|---|---|
| K20129 | ANKFY1; rabankyrin-5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035030.1 | False | 3564 | mRNA | 0.56 | 25 | 56615568 | 56654501 |
| XM_036937852.1 | True | 5972 | mRNA | 0.50 | 25 | 56615568 | 56657551 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ube2g1a | ube2g1 | coding | upstream | 11192 | 56594310 ~ 56604376 (+) |
| LOC110537822 | NA | coding | upstream | 40973 | 56572425 ~ 56574595 (+) |
| LOC100136702 | LOC100136702 | coding | upstream | 360407 | 56253926 ~ 56255161 (+) |
| LOC110537817 | LOC106567419 | coding | upstream | 726095 | 55881071 ~ 55889473 (+) |
| LOC110537815 | NA | coding | upstream | 768666 | 55792113 ~ 55846902 (+) |
| zzef1 | zzef1 | coding | downstream | 5518 | 56663069 ~ 56719231 (+) |
| LOC110537826 | LOC106567410 | coding | downstream | 135065 | 56792616 ~ 56869110 (+) |
| camkk1a | LOC106567408 | coding | downstream | 255472 | 56913023 ~ 57033702 (+) |
| LOC110537831 | dhx33 | coding | downstream | 455351 | 57112902 ~ 57118165 (+) |
| LOC110537832 | LOC106567406 | coding | downstream | 469196 | 57126747 ~ 57131602 (+) |
| G1091068 | NA | non-coding | upstream | 45118 | 56570195 ~ 56570450 (+) |
| G1091046 | NA | non-coding | upstream | 86381 | 56528982 ~ 56529187 (+) |
| G1091016 | NA | non-coding | upstream | 119270 | 56496090 ~ 56496298 (+) |
| G1090060 | NA | non-coding | upstream | 505133 | 56068622 ~ 56110435 (+) |
| G1091106 | NA | non-coding | downstream | 683 | 56658234 ~ 56658754 (+) |
| G1091224 | NA | non-coding | downstream | 77183 | 56734734 ~ 56734988 (+) |
| G1091231 | NA | non-coding | downstream | 88709 | 56746260 ~ 56746496 (+) |
| G1091237 | NA | non-coding | downstream | 98217 | 56755768 ~ 56756068 (+) |
| LOC110538908 | LOC106603872 | other | upstream | 2334847 | 54253719 ~ 54283905 (+) |
| G1087914 | NA | other | upstream | 2466606 | 54109690 ~ 54148962 (+) |
| G1086237 | LOC106567502 | other | upstream | 3958073 | 52649604 ~ 52657495 (+) |
| G1082266 | NA | other | upstream | 6934764 | 49679023 ~ 49680804 (+) |
| LOC110537713 | LOC106567542 | other | upstream | 7315221 | 49262142 ~ 49300347 (+) |
| G1091217 | NA | other | downstream | 68056 | 56725607 ~ 56726003 (+) |
| G1091235 | NA | other | downstream | 94867 | 56752418 ~ 56752947 (+) |
| LOC110537841 | mtmr4 | other | downstream | 1241920 | 57893341 ~ 58071571 (+) |
| LOC118937686 | NA | other | downstream | 1558604 | 58216142 ~ 58222215 (+) |
