Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118937690 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 59596614 ~ 59598278 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035051.1 | True | 820 | mRNA | 0.43 | 2 | 59596614 | 59598278 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccdc137 | ccdc137 | coding | upstream | 38135 | 59546119 ~ 59558479 (+) |
| nme4 | LOC100301668 | coding | upstream | 57241 | 59508568 ~ 59539373 (+) |
| xpo6 | LOC106600647 | coding | upstream | 94264 | 59440231 ~ 59502350 (+) |
| antkmt | fam173a | coding | upstream | 160543 | 59422836 ~ 59436071 (+) |
| hirip3 | hirip3 | coding | upstream | 174396 | 59398735 ~ 59422218 (+) |
| LOC110537890 | NA | coding | downstream | 1093 | 59599371 ~ 59611523 (+) |
| LOC110537886 | LOC106600678 | coding | downstream | 73939 | 59672217 ~ 59673882 (+) |
| atp6v0ca | vatl | coding | downstream | 90391 | 59688669 ~ 59702156 (+) |
| LOC110537889 | LOC106561172 | coding | downstream | 107667 | 59705945 ~ 59708325 (+) |
| LOC110537883 | LOC106600674 | coding | downstream | 111815 | 59710093 ~ 59726547 (+) |
| G1094010 | amdhd2 | non-coding | upstream | 3208 | 59591711 ~ 59593406 (+) |
| G1094009 | NA | non-coding | upstream | 9061 | 59586466 ~ 59587553 (+) |
| G1094003 | NA | non-coding | upstream | 18941 | 59577380 ~ 59577673 (+) |
| G1093979 | NA | non-coding | upstream | 79663 | 59516041 ~ 59516951 (+) |
| G1093974 | NA | non-coding | upstream | 92997 | 59503416 ~ 59503617 (+) |
| G1094084 | NA | non-coding | downstream | 87484 | 59685762 ~ 59686067 (+) |
| G1094095 | NA | non-coding | downstream | 136664 | 59734942 ~ 59735397 (+) |
| G1094098 | NA | non-coding | downstream | 153126 | 59751404 ~ 59751776 (+) |
| G1093909 | NA | other | upstream | 54011 | 59541558 ~ 59542603 (+) |
| LOC118937686 | NA | other | upstream | 1374424 | 58216142 ~ 58222215 (+) |
| LOC110537841 | mtmr4 | other | upstream | 1681782 | 57893341 ~ 58071571 (+) |
| LOC110537831 | dhx33 | other | upstream | 2478687 | 57112902 ~ 57118165 (+) |
| G1091235 | NA | other | upstream | 2843667 | 56752418 ~ 56752947 (+) |
| G1094218 | LOC100380853 | other | downstream | 432725 | 60031003 ~ 60034020 (+) |
| G1095244 | LOC108238713 | other | downstream | 787386 | 60385664 ~ 60385973 (+) |
| LOC110539079 | LOC106600700 | other | downstream | 1098409 | 60696612 ~ 60777061 (+) |
| G1095209 | NA | other | downstream | 1218213 | 60816491 ~ 60818897 (+) |
| mmp25a | LOC106600705 | other | downstream | 1356422 | 60931123 ~ 60965921 (+) |
