Gene
RNA
| Item | Value |
|---|---|
| gene id | mapk8ip3 |
| gene name | mapk8ip3 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 59769732 ~ 59838516 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| mapk8ip3 | Enables cargo adaptor activity. Acts upstream of or within axon extension; regulation of JNK cascade; and retrograde axonal protein transport. Predicted to be active in cytoplasm. Is expressed in central nervous system; peripheral nervous system; and posterior lateral line ganglion. Orthologous to human MAPK8IP3 (mitogen-activated protein kinase 8 interacting protein 3). |
| description |
|---|
| C-Jun-amino-terminal kinase-interacting protein 3 isoform X5 |
| id | description |
|---|---|
| K04436 | MAPK8IP3, JIP3; mitogen-activated protein kinase 8 interacting protein 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036937916.1 | False | 7186 | mRNA | 0.51 | 35 | 59769732 | 59838516 |
| XM_036937917.1 | False | 6956 | mRNA | 0.52 | 36 | 59769732 | 59838516 |
| XM_036937918.1 | False | 7168 | mRNA | 0.51 | 34 | 59769732 | 59838516 |
| XM_036937919.1 | False | 7162 | mRNA | 0.51 | 34 | 59769732 | 59838516 |
| XM_036937920.1 | False | 7153 | mRNA | 0.51 | 35 | 59769732 | 59838516 |
| XM_036937921.1 | False | 7147 | mRNA | 0.51 | 34 | 59769732 | 59838516 |
| XM_036937922.1 | False | 7135 | mRNA | 0.51 | 34 | 59769732 | 59838516 |
| XM_036937923.1 | True | 7135 | mRNA | 0.51 | 34 | 59769732 | 59838516 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937689 | LOC106567469 | coding | downstream | 59353 | 59708225 ~ 59710379 (-) |
| amdhd2 | amdhd2 | coding | downstream | 173545 | 59586461 ~ 59596187 (-) |
| LOC118936462 | LOC106600673 | coding | downstream | 195169 | 59571144 ~ 59574563 (-) |
| LOC110537880 | LOC106600673 | coding | downstream | 200421 | 59567856 ~ 59569311 (-) |
| asphd1 | asphd1 | coding | downstream | 489155 | 59214586 ~ 59280577 (-) |
| jpt2 | hn1l | coding | upstream | 19699 | 59858215 ~ 59881634 (-) |
| dhrs7b | dhrs7b | coding | upstream | 116507 | 59955023 ~ 59963331 (-) |
| tmem11 | LOC106600685 | coding | upstream | 126507 | 59965023 ~ 59967584 (-) |
| natd1 | natd1 | coding | upstream | 129738 | 59968254 ~ 59971543 (-) |
| LOC110537899 | LOC106600689 | coding | upstream | 204663 | 60043179 ~ 60097932 (-) |
| G1094813 | NA | non-coding | downstream | 3576 | 59764827 ~ 59766156 (-) |
| G1094819 | NA | non-coding | downstream | 31094 | 59738222 ~ 59738638 (-) |
| G1094804 | NA | non-coding | downstream | 43188 | 59724948 ~ 59726544 (-) |
| G1094802 | NA | non-coding | downstream | 63871 | 59704812 ~ 59705861 (-) |
| G1094927 | NA | non-coding | upstream | 103734 | 59942250 ~ 59942964 (-) |
| G1094940 | NA | non-coding | upstream | 136483 | 59974999 ~ 59975279 (-) |
| G1094941 | NA | non-coding | upstream | 137078 | 59975594 ~ 59975811 (-) |
| G1094944 | LOC106575331 | non-coding | upstream | 139274 | 59977790 ~ 59978118 (-) |
| G1094946 | NA | non-coding | upstream | 141254 | 59979770 ~ 59980028 (-) |
| G1094783 | NA | other | downstream | 67585 | 59700468 ~ 59702147 (-) |
| G1094699 | NA | other | downstream | 230352 | 59508598 ~ 59539380 (-) |
| pitpnbl | LOC107739385 | other | downstream | 582177 | 59144152 ~ 59187749 (-) |
| G1092523 | NA | other | downstream | 2412458 | 57291444 ~ 57357274 (-) |
| G1092205 | LOC106567410 | other | downstream | 2910585 | 56857338 ~ 56859147 (-) |
| snrnp70 | LOC106583923 | other | upstream | 500358 | 60336697 ~ 60349405 (-) |
| G1097645 | NA | other | upstream | 1200200 | 61038716 ~ 61324712 (-) |
| LOC110539101 | NA | other | upstream | 1305596 | 61144112 ~ 61244327 (-) |
| G1097817 | NA | other | upstream | 1665444 | 61503960 ~ 61504834 (-) |
