prrg2 (prrg2)


Basic Information

Item Value
gene id prrg2
gene name prrg2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 60501702 ~ 60511300 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021624373.2
TGTTGTAAAACAGGTATGTCATGTCGTGTGACGTTTTGGCAGGGTGTTTGCCTGATAGGTACATTTGGGTAGATGTTTTACCTGTCGTAAATTAGCACAAAAAAAAACCTTATAATAAACAATTTAATTAGCATATAATAGCTCATAGTAATTGTTTAAGTCAAGGAAAGCCTGGGTGAGCGAGTTGTAAATAGAGGATTAAatattcagtttttcacaagCTTCGAGGCGGAAACACCAAAGACACAAGTTGTCGCTCCTGCTTGAGAAATGCCAGGCTTGGCAGAGATATGTATTGGCATGCTGTCGCTGCTCCCCCTGGCTTGGGCCAGAGTAGTCTACAGCCACAATGAAGTGTTCCTGGGACAACAGTCTGCGTCCTCGTACCTGTCTCGCTCGCTGCTCTGGAACAAATGGGACCTGGAGCTGGTGACGCCAGACAGCCTTGAGAGGGAGTGCATAGAGGAGGTGTGCACCTACGAGGAGGCCAGGGAGGTGTTTGAGGACACACCCCAAACGAATGTATTTTGGAACACATATTCCAGCAGTCACAATACAGCTCCCAGAGTGGATGTGTCTGGTCTAGTGGCAGGAATCTTGGCTGTTCTAGTGTCTGCTGTCATAGCCACGGTGCTGGGCTGCTACTGTTACAAGAACAAAGCTGGTAGGACAGCAGGCAGTGCTCCAGTGAGGATAGTTGTGGATGGCCAGCCTGCCCCAGAGACAGTGCCTCTGGCTGGGATCATCGCTCCAGGACTGCCCTCCTACGGCGAAGCCCTGACACGCAGTGGGCAGCATGACGCGCCCCCGCCACCTTACTCTGGGGGGGCACCATCAGTACCTCCTGACCCAGCTGACAATACTGAGATTACTGCAAATACTGTGGacacagagtgaaaaggaggaaaGGACATTTTAAAAAGGGCCATTCATgaagagtgggtgtgtgtgtgtgttacaagcATCAATTGGAGTTCTGGACAGTTATAAGTGAGCACAGCTGTGAACATTTTAACTCCTGTGAGTTGTTGAAATAGATACGGGAAATGTCCATATAATAGGAgagcatttctttttttttttattcgggGGAAGAGGGGAGTTCATAGGGGGGGCAAGGCTGAAGGATGTTATAGATAGAGAAATTAAGGGAATGGGATGAAGACTTGTTAAGAGGTTACCTGTGAGAAAGAGAAGCAATCCCTTGATTgcaaagttacatatcttgacaACTTGATTgatgacaagcaaaacattttgggactatttcAACAATGGGCTAATGGAATGTCCTTTAATATGTATAAACTAGCAGATGGTATAGAATTTAGGTCAACATGTTGGCTAATGTTTGTTTTATCTCGGTTGTTTTTATCTGTATTGGTACATGACAGACCGCTCTGAAATTAAGTCTATATTTATACACATTTCTTAGTCAAAACATTTGAATAAAACGTTTTGCACCTAGCCCACTGGTCAATCAGACAGTCATCTAGATTCCATAGAGTTGCACGTTTCTTTTTCCCCCTCTGCTCAGGGTCTGTTTATTTCTCCCGATTCAGAAATGAGTAATCCAAAATGTTACGGTACTGATTACTTTATTTTTTGCAGCATTGAGTAACGGTAACGGTTACATTTTTCAAGTAATCCGCCCAACCCTGCATATATCTGCACTCTTTAATCGAAATGTATCTTGCATTGCTCCCAAATGTACCCTTTTGGCCTGTGCTACACTGTATTCTGTCTGAGAATGTTCTCTGTGTATATGACTAAAGGCTGGTCAGTCTGCATCTGAGGTGGCCGTATAGCATTTACTACGATGCTGCCTCCGCAGACATCAGGGCCTTCATACTTCTTGTACTTAGCTGAGCCGAGCTATTGTGAAGGAatttgtcaaggaagtgagttagTGTTTATACTAGACTTCCCGCTCCCACCTACCCTCAACCAATcttgtcaatgcggagctatacagaGCCCTTCGCTTTGTTACAAAATTTGAGAGGCGCACGGCGATGTGGTACAGCGCATGATTTGGCCTCTGCATTCCTCTGGTGGctccgcaattgcgtcacacccGTCATACGAAGTCTCTGACCACATTTCGGATCAAACATAAATTGGCTTTTAGAAAGAGTTGGATTAGCAGAcactgcgtatgtgtgtgtgtgtgcgcactggagagggagagaaagcgaggaagtggggagagggagggagtgtgctAACATGCGATCCAACCAGCCGCTCTAAAAAAATGGCGTCTTAAGAAGAAAATGACGTGTAACCCTCACATCAAGATTCTAGTATGGCCGCGAAACCTCTCTTCAATTCTCTCAGGTCTATTTGTAATTGGTTTTTACAAAAGAACGCGAGGAACAATACAATATATGTTGCGCGGTACGAATATTGTAGTCGTTGCCAAAGTCAGAAGGCCCGCCTACTTGACCAATCAGATGAGGGAGTGGATCACGCGTATGCTGACCAGTTTGCAGGGGCAGACGAGAGACATGCATTTATGCTGCGTTCAAATGGTAGTCGGATCTAGGATACTGACATTTCTGGCTTGCTAAATGGTTGTAGTTCTGCACGTGCCGCGTTCAACGAATCATCAAGTCGGAAATTCTAGTTCCGACTAGTAAGTGAACGCGGCACCATTTTTATCACAATGATTTCTTTATTTATTAGCTATAATAAAACCAACCGTTCTAAATGTAAAGTGGTAATCGGATGTCTTTTTCAAACTCAGCATGAAAGCTTATCATTATGTTTTCCCTTACTCAGTTACTTGTTTTAACCCAAAATAGGTTTACTCCAATATCAGCATTGTTTTTAAAATGGCATGTAAGACAGACAAATTGACACACCTTGAAAACGTACACAGTTTCAcataaatgtttattttcattttaaaTGTGTTTATTTCTGCCTGATTTAAGATAAACTTCAACCCGTTTACTTTATTTGGCACCTAGGAACTTACTATAGTCATTTATTTAACTTGACAGTACACCTTTTTggtattttgtacctgtttctgtCTCAGTACAAAGGCATGGTCTTCAAACATGTAATAATTATTATGATTAATTGGACTTACATGGCACTTTAGACACCCAAAGCTCTTTACAGTGtaaggggaaactcaccaccctaaccccacttggtgccttcagaaagtattaaaaccccttgactt
>TU1245660
GTTTTGGCAGGGTGTTTGCCTGATAGGTACATTTGGGTAGATGTTTTACCTGTCGTAAATTAGCACAAAAAAAAACCTTATAATAAACAATTTAATTAGCATATAATAGCTCATAGTAATTGTTTAAGTCAAGGAAAGCCTGGGTGAGCGAGTTGTAAATAGAGGATTAAatattcagtttttcacaagCTTCGAGGCGGAAACACCAAAGACACAAGTGTTCCTGGGACAACAGTCTGCGTCCTCGTACCTGTCTCGCTCGCTGCTCTGGAACAAATGGGACCTGGAGCTGGTGACGCCAGACAGCCTTGAGAGGGAGTGCATAGAGGAGGTGTGCACCTACGAGGAGGCCAGGGAGGTGTTTGAGGACACACCCCAAACGAATGTATTTTGGAACACATATTCCAGCAGTCACAATACAGCTCCCAGAGTGGATGTGTCTGGTCTAGTGGCAGGAATCTTGGCTGTTCTAGTGTCTGCTGTCATAGCCACGGTGCTGGGCTGCTACTGTTACAAGAACAAAGCTGGTAGGACAGCAGGCAGTGCTCCAGTGAGGATAGTTGTGGATGGCCAGCCTGCCCCAGAGACAGTGCCTCTGGCTGGGATCATCGCTCCAGGACTGCCCTCCTACGGCGAAGCCCTGACACGCAGTGGGCAGCATGACGCGCCCCCGCCACCTTACTCTGGGGGGGCACCATCAGTACCTCCTGACCCAGCTGACAATACTGAGATTACTGCAAATACTGTGGacacagagtgaaaaggaggaaaGGACATTTTAAAAAGGGCCATTCATgaagagtgggtgtgtgtgtgtgttacaagcATCAATTGGAGTTCTGGACAGTTATAAGTGAGCACAGCTGTGAACATTTTAACTCCTGTGAGTTGTTGAAATAGATACGGGAAATGTCCATATAATAGGAg

Function

symbol description
prrg2 Predicted to enable calcium ion binding activity. Predicted to be located in extracellular region and membrane. Predicted to be integral component of membrane. Orthologous to human PRRG2 (proline rich and Gla domain 2).

NR:

description
transmembrane gamma-carboxyglutamic acid protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021624373.2 False 3199 mRNA 0.43 7 60501702 60511300
TU1245660 True 927 lncRNA 0.48 6 60501734 60509165

Neighbor

gene id symbol gene type direction distance location
LOC110537905 LOC106583918 coding upstream 1209 60482890 ~ 60500493 (+)
si:ch211-195b15.8 LOC106600694 coding upstream 19681 60478445 ~ 60482021 (+)
ap2a1 LOC106600693 coding upstream 38007 60415043 ~ 60463695 (+)
lin7b lin7b coding upstream 178962 60317232 ~ 60322740 (+)
parp14rs1 LOC106600688 coding upstream 491833 59980746 ~ 60009869 (+)
prr12b prr12 coding downstream 1947 60513247 ~ 60544029 (+)
scaf1 scaf1 coding downstream 65661 60576961 ~ 60596221 (+)
trpm4a LOC106600700 coding downstream 114295 60625595 ~ 60688115 (+)
LOC110539079 LOC106600700 coding downstream 185312 60696612 ~ 60777061 (+)
LOC110539110 LOC106600715 coding downstream 286941 60798241 ~ 60805113 (+)
G1095245 NA non-coding upstream 113996 60387455 ~ 60387706 (+)
G1095243 NA non-coding upstream 118267 60383146 ~ 60383435 (+)
G1095239 NA non-coding upstream 124514 60376967 ~ 60377188 (+)
G1095238 NA non-coding upstream 124912 60376431 ~ 60376790 (+)
G1095237 NA non-coding upstream 125849 60375633 ~ 60375853 (+)
G1095306 NA non-coding downstream 35487 60546787 ~ 60550460 (+)
G1095322 NA non-coding downstream 45749 60557049 ~ 60557273 (+)
G1095326 NA non-coding downstream 52149 60563449 ~ 60563648 (+)
G1095329 NA non-coding downstream 54717 60566017 ~ 60566245 (+)
G1095332 NA non-coding downstream 56538 60567838 ~ 60568068 (+)
G1095244 LOC108238713 other upstream 115729 60385664 ~ 60385973 (+)
G1094218 LOC100380853 other upstream 467682 60031003 ~ 60034020 (+)
G1093909 NA other upstream 959099 59541558 ~ 59542603 (+)
LOC118937686 NA other upstream 2279512 58216142 ~ 58222215 (+)
LOC110537841 mtmr4 other upstream 2586870 57893341 ~ 58071571 (+)
G1095209 NA other downstream 305191 60816491 ~ 60818897 (+)
mmp25a LOC106600705 other downstream 443400 60931123 ~ 60965921 (+)
G1095540 NA other downstream 526439 61037739 ~ 61352345 (+)
LOC118937701 LOC100136295 other downstream 1935204 62441706 ~ 62448515 (+)

Expression


Co-expression Network