Gene
RNA
| Item | Value |
|---|---|
| gene id | nudt9 |
| gene name | nudt9 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 61674727 ~ 61682763 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| nudt9 | Predicted to enable ADP-ribose diphosphatase activity. Involved in regulation of cyclic nucleotide-gated ion channel activity. Is expressed in several structures, including Kupffer's vesicle; axial chorda mesoderm; axis; nervous system; and trigeminal placode. Orthologous to human NUDT9 (nudix hydrolase 9). |
| description |
|---|
| ADP-ribose pyrophosphatase, mitochondrial |
| id | description |
|---|---|
| K13988 | NUDT9; ADP-ribose pyrophosphatase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021626068.2 | True | 2446 | mRNA | 0.46 | 8 | 61674727 | 61682763 |
61,667,000
61,668,000
61,669,000
61,670,000
61,671,000
61,672,000
61,673,000
61,674,000
61,675,000
61,676,000
61,677,000
61,678,000
61,679,000
61,680,000
61,681,000
61,682,000
61,683,000
61,684,000
61,685,000
61,686,000
61,687,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110539080 | LOC106600701 | coding | upstream | 78240 | 61587563 ~ 61596487 (+) |
| LOC110539107 | LOC106600721 | coding | upstream | 143789 | 61524698 ~ 61530938 (+) |
| LOC110539102 | NA | coding | upstream | 349572 | 61317055 ~ 61325155 (+) |
| LOC110538925 | cln3 | coding | upstream | 389534 | 61258812 ~ 61285193 (+) |
| LOC118936506 | NA | coding | upstream | 464246 | 61200915 ~ 61210481 (+) |
| LOC110537909 | ehd3 | coding | downstream | 204 | 61682967 ~ 61699122 (+) |
| atp2a1 | atp2a1 | coding | downstream | 42005 | 61724768 ~ 61753320 (+) |
| LOC110537916 | LOC106600735 | coding | downstream | 85654 | 61768417 ~ 61772732 (+) |
| sh2b1 | sh2b1 | coding | downstream | 111383 | 61794146 ~ 61813456 (+) |
| atxn2l | atxn2l | coding | downstream | 130868 | 61813631 ~ 61833601 (+) |
| G1095770 | NA | non-coding | upstream | 3374 | 61586737 ~ 61671353 (+) |
| G1095739 | NA | non-coding | upstream | 111571 | 61562812 ~ 61563156 (+) |
| G1095761 | NA | non-coding | upstream | 116248 | 61558230 ~ 61558479 (+) |
| G1095760 | NA | non-coding | upstream | 118756 | 61555667 ~ 61555971 (+) |
| G1095759 | NA | non-coding | upstream | 135827 | 61538700 ~ 61538900 (+) |
| G1095825 | NA | non-coding | downstream | 34605 | 61717368 ~ 61717640 (+) |
| G1095866 | NA | non-coding | downstream | 124710 | 61807473 ~ 61807777 (+) |
| G1095867 | NA | non-coding | downstream | 133657 | 61816420 ~ 61816709 (+) |
| G1095883 | NA | non-coding | downstream | 165313 | 61848076 ~ 61849280 (+) |
| G1095540 | NA | other | upstream | 322382 | 61037739 ~ 61352345 (+) |
| mmp25a | LOC106600705 | other | upstream | 709132 | 60931123 ~ 60965921 (+) |
| G1095209 | NA | other | upstream | 855830 | 60816491 ~ 60818897 (+) |
| LOC110539079 | LOC106600700 | other | upstream | 960715 | 60696612 ~ 60777061 (+) |
| G1095244 | LOC108238713 | other | upstream | 1288754 | 60385664 ~ 60385973 (+) |
| LOC118937701 | LOC100136295 | other | downstream | 763741 | 62441706 ~ 62448515 (+) |
| LOC100305204 | hebp2 | other | downstream | 1619728 | 63302491 ~ 63334694 (+) |
| LOC110538933 | LOC106600901 | other | downstream | 2205333 | 63888086 ~ 63908673 (+) |
| G1097063 | NA | other | downstream | 2453595 | 64136358 ~ 64136704 (+) |
| G1097116 | NA | other | downstream | 2545238 | 64228001 ~ 64228684 (+) |
