Gene
RNA
| Item | Value |
|---|---|
| gene id | stxbp2 |
| gene name | LOC106600924 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 63444727 ~ 63461648 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| syntaxin-binding protein 2-like isoform X2 |
| id | name | namespace |
|---|---|---|
| GO:0006904 | vesicle docking involved in exocytosis | biological_process |
| id | description |
|---|---|
| K15300 | STXBP2, MUNC18-2; syntaxin-binding protein 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021624468.2 | False | 2182 | mRNA | 0.50 | 18 | 63444727 | 63461648 |
| XM_021624469.2 | False | 2179 | mRNA | 0.50 | 18 | 63444727 | 63461648 |
| XM_036938044.1 | True | 2021 | mRNA | 0.50 | 17 | 63444727 | 63461648 |
63,426,000
63,428,000
63,430,000
63,432,000
63,434,000
63,436,000
63,438,000
63,440,000
63,442,000
63,444,000
63,446,000
63,448,000
63,450,000
63,452,000
63,454,000
63,456,000
63,458,000
63,460,000
63,462,000
63,464,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537980 | NA | coding | downstream | 7467 | 63434469 ~ 63437260 (-) |
| xab2 | syf1 | coding | downstream | 13892 | 63415063 ~ 63430835 (-) |
| camsap3 | LOC106600930 | coding | downstream | 32050 | 63359503 ~ 63412677 (-) |
| LOC110537971 | LOC106600935 | coding | downstream | 239624 | 63191264 ~ 63205103 (-) |
| LOC110537968 | LOC106600938 | coding | downstream | 313855 | 63125113 ~ 63130872 (-) |
| LOC110537983 | LOC106600926 | coding | upstream | 202 | 63453115 ~ 63467479 (-) |
| pbx4 | LOC106600918 | coding | upstream | 104217 | 63565865 ~ 63619465 (-) |
| LOC110537988 | LOC106600917 | coding | upstream | 158720 | 63620368 ~ 63632955 (-) |
| atp13a1 | LOC106600914 | coding | upstream | 172312 | 63633960 ~ 63653448 (-) |
| lmx1al | LOC106600915 | coding | upstream | 197392 | 63659040 ~ 63685854 (-) |
| G1098791 | NA | non-coding | downstream | 4779 | 63439678 ~ 63439948 (-) |
| G1098790 | LOC100136012 | non-coding | downstream | 5391 | 63439059 ~ 63439336 (-) |
| G1098788 | NA | non-coding | downstream | 9672 | 63434823 ~ 63435055 (-) |
| G1098754 | NA | non-coding | downstream | 105209 | 63339222 ~ 63339518 (-) |
| G1098842 | NA | non-coding | upstream | 73234 | 63534882 ~ 63535102 (-) |
| G1098847 | NA | non-coding | upstream | 80426 | 63542074 ~ 63542578 (-) |
| G1098850 | NA | non-coding | upstream | 82968 | 63544616 ~ 63544828 (-) |
| G1098864 | NA | non-coding | upstream | 113525 | 63575173 ~ 63575512 (-) |
| G1098886 | NA | non-coding | upstream | 118214 | 63579862 ~ 63580421 (-) |
| G1098256 | LOC106600954 | other | downstream | 954473 | 62380280 ~ 62490254 (-) |
| G1098154 | LOC106600756 | other | downstream | 1258781 | 62182750 ~ 62185946 (-) |
| G1097953 | sh2b1 | other | downstream | 1636226 | 61803710 ~ 61808501 (-) |
| ypel3 | LOC103040367 | other | downstream | 1831602 | 61602944 ~ 61613176 (-) |
| G1097852 | LOC106600701 | other | downstream | 1851264 | 61591238 ~ 61593463 (-) |
| G1099090 | LOC105030512 | other | upstream | 678814 | 64140462 ~ 64140912 (-) |
| G1099144 | LOC105893191 | other | upstream | 759320 | 64220968 ~ 64221572 (-) |
| G1099482 | LOC106600895 | other | upstream | 865251 | 64326899 ~ 64332071 (-) |
| G1099535 | NA | other | upstream | 905767 | 64367415 ~ 64367770 (-) |
