Item | Value |
---|---|
gene id | LOC110538018 |
gene name | LOC106600888 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048576.1 |
NCBI id | CM023230.2 |
chromosome length | 102853256 |
location | 64386978 ~ 64396396 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
uncharacterized protein LOC110538018 isoform X1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036938078.1 | False | 2733 | mRNA | 0.51 | 12 | 64386978 | 64396396 |
XM_036938079.1 | False | 2730 | mRNA | 0.51 | 12 | 64386978 | 64396396 |
XM_036938080.1 | False | 2704 | mRNA | 0.51 | 12 | 64386979 | 64396396 |
XM_021624544.2 | True | 2602 | mRNA | 0.51 | 11 | 64386980 | 64396396 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110538017 | atf4 | coding | downstream | 1903 | 64383198 ~ 64385075 (-) |
LOC110538015 | LOC106600892 | coding | downstream | 24984 | 64343445 ~ 64361994 (-) |
LOC110538934 | LOC106607443 | coding | downstream | 49036 | 64331331 ~ 64337942 (-) |
LOC110538014 | LOC106600895 | coding | downstream | 57209 | 64326884 ~ 64329769 (-) |
LOC110538013 | LOC106600896 | coding | downstream | 95329 | 64279915 ~ 64291649 (-) |
mief1 | LOC106600887 | coding | upstream | 22986 | 64419382 ~ 64427943 (-) |
LOC110538027 | LOC106600973 | coding | upstream | 148104 | 64544500 ~ 64558035 (-) |
LOC110538028 | LOC106600880 | coding | upstream | 188905 | 64585301 ~ 64624376 (-) |
syngr1a | LOC106600879 | coding | upstream | 244135 | 64640531 ~ 64666913 (-) |
fam171a2a | LOC106600878 | coding | upstream | 271012 | 64667408 ~ 64731869 (-) |
G1099540 | NA | non-coding | downstream | 6522 | 64379896 ~ 64380456 (-) |
G1099532 | NA | non-coding | downstream | 21080 | 64365670 ~ 64365898 (-) |
G1099515 | NA | non-coding | downstream | 48260 | 64338368 ~ 64338718 (-) |
G1099507 | NA | non-coding | downstream | 70184 | 64316575 ~ 64316794 (-) |
G1099082 | NA | non-coding | downstream | 119703 | 64266698 ~ 64267275 (-) |
G1099572 | NA | non-coding | upstream | 35438 | 64431834 ~ 64432184 (-) |
G1099574 | LOC106607449 | non-coding | upstream | 40902 | 64437298 ~ 64438400 (-) |
G1099592 | NA | non-coding | upstream | 66438 | 64462834 ~ 64463037 (-) |
G1099595 | NA | non-coding | upstream | 72767 | 64469163 ~ 64525829 (-) |
G1099600 | NA | non-coding | upstream | 80572 | 64476968 ~ 64477706 (-) |
G1099535 | NA | other | downstream | 19208 | 64367415 ~ 64367770 (-) |
G1099482 | LOC106600895 | other | downstream | 54907 | 64326899 ~ 64332071 (-) |
G1099144 | LOC105893191 | other | downstream | 165406 | 64220968 ~ 64221572 (-) |
G1099090 | LOC105030512 | other | downstream | 246066 | 64140462 ~ 64140912 (-) |
lmx1al | LOC106600915 | other | downstream | 701169 | 63659040 ~ 63685854 (-) |
G1099816 | NA | other | upstream | 421983 | 64818379 ~ 64818729 (-) |
LOC118937713 | ifn1 | other | upstream | 1503977 | 65900373 ~ 65904872 (-) |
G1101510 | NA | other | upstream | 1790463 | 66186859 ~ 66187244 (-) |
LOC110538067 | LOC106607530 | other | upstream | 1822720 | 66219116 ~ 66223229 (-) |
G1102331 | psd3 | other | upstream | 2268893 | 66665289 ~ 66666338 (-) |