LOC110538022 (LOC106600886)


Basic Information

Item Value
gene id LOC110538022
gene name LOC106600886
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 64430505 ~ 64438581 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021624555.2
TTGACCATTCCATTAGGGAGAGTATTTGCAGTGAGAGGCTGCCTCAGATTCACCCAGCGTCTATTGAGACAGGAAATGTAATTGCTTAATTGGAATCACTAGGTACATATTATTGCCAACCCTTGTTTGTGTAGTACAACAAAACTTGCTGTTCACTGACTATCACTGCATCTTACGGAGCGTACATATCTTGGGAGTGTTTTCGGTGTTGAGGTTCCCCCTATCGACAGGACAGGATGGCACTACTCGATTACCCTATTCCAGAGCTAGATGTCACCTTACAAGAGGCAGGCCGTGTGCTCCAGCTCACCCTGAGCCCCGAGCTCTACCCTCAATTCAAAAATACCCTTAGCCAACAGAGGGAGGTCCTGCAGGAGGCCCAAAAGTGCTTGGCGGCTGCCGCCTCTGGCCGAGAGAACTGGGTGACAGAGCAATTCAAGAGCCGGCTGCTTTCATGTACCGACCCCCTGCCCACCTCGACAGCCATCCCTGCTGTCTTGCCCCCCTCCAGAGCCAGGAAGGAGTGTGCCCAACTGGAGAGGgctgctgctctgctctgggcTGTGGCCAAGATGTATAGTGAGCCTTCGCTGGTAGAGGGTGAGGGGCAAACTGAGCGCACACAGCAATCAGAGGTGTTTGCTGCCAGCCGCATTCCTGGGAAGACCCAAGATGAGATTAAAGTATACCAAGACTGCCTCCATGCCATCGTAATCTGTGCTAGAGGGGTATTTTCAGTCAACATACTGCAGCATCCCAGCCCAGGCGGGCCTATGTCCCCTCTACCGTTCCCTGACATCTACAGCCAAGTGGCTCATGTGATGAGCCAACATAGAGCTGCCAAGAACAACAAGCCCTCTGCCATCTGCGGCCTCTCTGCCCTGCAGCGGCAAGCCTGGAGTGCTGTGAGGGAGGAGATCCTGAGAGCAGGTGGGGCAGCGGCCGCCTCACTGGGGTTGATGGAGAGTGCTGTGGTGGCTCTCTCCCTGGAAGACTGCAATGCACCAGCTGATCTGGCAGACACCCTTAATGCTGTCAGactgggaggaggagatgggCCCTGTCTGAGATACTATGACAAGGTGGTGAACCTGGTGGTATTCAAAGACAGCACAGCAGGGATGGTGTTTGAGCACAGTGCACTGGATGGAATGGTGGCTGGGTTAGTGGCTGAGACTGTGTGGTATCTCTCTGAGTCACTTAATGTAGACCTAGTCCAGGCCAACACAGGAAGCAATGGGTCAGCCTATCTTAACAAGGCTGATTCCTCCTCCCCAAGCCCCTTAGCATTCCCACTACATGCATTCCCACTAACTAAAACAGACCCCCCAAAGTCCTCCCCTAAAGCAATTCATCCCATCATCACGTTTGAGGTTCTCTCTTACCCAGATGTCTTTGCTACCCTCCGGGGTCACAGGGGCCTGTACGATGCCTGGATCAACTTTTCCTTGCAGCTCTCCCTGAGGCAGACTCTTGGGGAATCTGCTGCCAGCCACATTCTTGTAACCCCTACCCATATGCGTCACTACAAGCATGGCCGCTGCGATCCAACATACTCCCTCACCATGCAATCCTACCAGCTCATCAGTGCTTTGGAATCCTGCATCGGACCAGACAACAACCCTCGATACACGAACGAACTGCTCCGTCTGTTCCATGTGGCTTTCCTGGAGCACAAAAACCTGATTAAAGCCACTAAAAGTGGACATGGTGTGGGCCCTCACCTAGCAGCCCTACGCTGGTCCATGTCTCCAGACAACCCTCTCAAGAAGTTTCTTGACCCCTTTGGGTGCCCCTCTGTTTACCTTACTGGCAAGGATTTGATGGAGGGAGTGGAGCTTGCTGTAGGGAATGTGTATGCTAAAGACCAACTTGCTGTAACCTACCTGGGGAGAAGAGACCGGGTCCGTATAGTGCTCAATGGTAAAGGCACCTTTTCCACAGTGTTGGAGAAGCTTCAAGATAGCCTGAAAGTAAATCTGAAGCTGGTGATGCTTCTCGCTGTCAGATATTCCATCGCCGGACAAATGGGAGCCATGGAGTGTCTGCTGCAAGAAGAACAAGCAGGAAGAAGGAATGGATCCTCCCAAGGGGAAATTCACAAATGTATCAGTCCAGCAGGCCAAAAACAAGGCACAACAATGTCTAAGTCAACACTTTCCTCTAACTCTGCCTCCAGCATGAGTCCAAACTTCACTTTGGTGATCCATGGTGGAGCTGGGGAGGAGATGATGCTGAATACAAAGGTGGTAGGCGTCATTGAATTTGCTCTACAGACAGCTCTGACCCTCGGATCACAAGTGCTACAACAGGGAGGCAGTAGTCTTGACGCAGTACAGCGGAGTGTGCAAGCTCTTGAAGACTGCTTTCTGTTCAATGCCGGGAAGGGATCTGTTTTCAACAAAGATGGGAAAAATGAGATGGAGGCGACCATAGTAGATGGAAATGGGATGAACTCTGGATCGGTGGCTTGTGTGCAGAGTGTGAAGAACCCTGTGAAAGCAGCAAGACAGGTCATGGAGAAGAGCGTACACTCACTCTTAGTAGGGGAAGGTGCAGAAGAGTTTTTGCAAGGCTTAGAAGAGAGTGAGAAGCCTATGAGGGCGGAGTACTTCCAAACTGATGTCCGTCGCAGAGAGCTGACAGCAAAACTCAGTACTGGCAACGCCTCCAAGAACAAGCATCCACAGAAAGTGGGAGCTGTTGCTTTGGATCGATGGTGTAGGTTAGCTGCtgcaacgtccacaggtgggttgGTGGGAAAATGGAAGGGTCAAGTTGGAGACACAGCAGTAGTGGGAGCAGGTATATTTGCTGATGACAAGCTTGCAGTAACCTGCTCTGGTGATGGAGATGTGTTTCTAAGACACACAGTTGCACAAAAAGTGGCCAGTCTCTACCATCATAAAGGCTACAGCCTTAGGGCGGCATGTCGAGAAGTCATGTCTGAGAACTTGAAGGGCAGCTGTGCTGGGATCATTGCTGTAGACGCAAAAGGGGATGCTGTTGTTGAAACCAATGTTGAGGTGTTGTTTGTAGCTTCCATGGTTGGTGGCATTGCACGTGTCGAAGTCCTGAGACCCATGAAGAGTTATTTCAATGTAATCTGGGAGACTGATGAACTAGTTGCTCACCTACACTCCAACCCTTGGACACCAGGTGCCACCATCCTTACCCAAAAGACTCTGAGTGGGCCAAGCAGCATCTTTCAGCTGGTTGAACCAGATTTCTTAGCACTGTTGCAAGGCGCACGGGCTGTTTCAAACCTGCTATGCGAACGACTGGGGGTACAGCGTTGCGCCCTAGTATTTAACCCACATCCCGAGCAGCCGGCCCATATCCGAGTGCTACCACTTCATGGTTTGGAATCCAACTGGCGCTCCCAACCTACTGGGGAGGAGGACTTTCAGGCCTATGATCCAGGTTACTGCACCTCAAAGAGTGGCCCGCGCTGGGAAGATGCAGATCTGGACCAGGTTCAGGCCAAGATTCGGGACAAGCTGCCAACGCCTAACGCACCATCGTGCTATGACTTCTTAGGAGATCCTTCCCACAATGGACTGTTCTGCCGTATTGTGCGTGGGGAGGAGCAACAGTGGCGGGTGTGGGAAGACAGTGATCATGTGGCTTTCCTCACTCCCTACCCTAATACACCTGGACTCACAGTTCTAGTGCCACGTAAACCACTGTCCAGCAACATTTTCCGTCTGGAAGAGACTGATTACACATCACTGATCCTGGCCACTCGTAAGGTAGCTGGACTGCTGGAGGAAGGAATGCATGCTCGAGGTGTTGCACTCATCTTTGAGGGCTTTGAGATCGATTATGCCCATGTCAAGCTGATCCCTCTGGTTCCTCCACGTGGTGACAAGCCTGCTGAGGTGTTCCCAGAGTACTTCCAAAGCTACCCCGGCTACGTCTCATCTGTCGATGGCCCTCCCGCCAGCCCTGAAACTCTAAAGGAAATCCACACCAAAATCACACTTTGCAGGCCTCCTCGTTCCTGGGAGGATCCACAGAGCCACTCCATGTTAGCCATCAAGAGCCAGTGGTACCGCAATCTCTTTCAAATTCAAAATACTCTCTTCCACAACACAGTGGAGTACTTCAACAACACCTGTCAGTACGCGTACGCCCTGACTCCTCTCACCACTGACACAATCTCCTCTCCGATGGGCCTGGGATCAGACTCCGAGCCCGTTTACGTCAACTTGCTGGGGCAGGATGTGTACTTGGCTGACTCCATGCAATTTGTGCTGGAGTATTTCTTGCGATTCCAAGAAAACTTGCCAGGGACATACTACGTATCGCCAAGTTTCCGGGGAGAAGATCCAGATGCCACTCATCTTAACCAGTTCTACCATGTTGAGTGTGAGCTCCTGGGCGACATGGATACTGCCATGCACATAGCTGAGGGATACGTGGCTCATCTCACCAATGCAATGCTGAAGAAACACTCCAACATCATACTGAACTCTGCTGGGACCCTTTCACATGTCAAGGACTTACTGGAGAAGTTGGAGGGAGGAACCCCTCTGCCAAGAGTCACTCTGGACAAGGCCATCCCTATGATGCCCTCTCCAGACTGCTTGGAGTGGGTACAGGACGGCCAGCCCCAGTTTGGCAGGAAGTTAACCCGCAAAGGAGAACGGGTTTTGATTGAGAAGTACGGAGGCGCTGTTTGGCTGACAGAGATGGACCACCTGGGAGTGGCTTTCTACCAAGCATATGTGGAGGGCTCGGGCAGACGCAAGGCAAAAGCATCGGACCTCCTCTTGGGATTGGGGGAGACTCTGGGTCTTGGGGAGCGTCACTCCAGCCCTGAGATGGTGCAAGAAGCCCTCAGACATCATGCAGTCCCAGAGGAATCCTACAAGTGGTACATCAACATGCGGCAGGTCATTCCTCTACTCACCAGCGGGTGGGGTATGGGCACCGAACGCTACTTGTGTTGGCTGCTTCAGCATAATGACATCAGAGACATACATATTATACCCCGTATGAAGGCCAGGAAATACATGCCTTGAAATATCCTTAACCCACTAGTTACCCAAAGACGGATGAAAAAGTTGCCTAACTGTCAGCTCTTTCATTGAACGTCCTAAGGGATTCAaggtgtattttttattttgactattttctacatttaaaaaatagtgaagacattactactatgaaataacatgtgtagaatcatgtagtaaccaaaaaaaagtgttaaacaaatctaaatatattttatatttgagattcttcaaagtagccaccctttgccttgatgacagctttgcacactcttggtattctctcaacaaccttcatgaggtagtcacctggaatgcatttcaattaacaggtgtgccttgttaaaagtacatttgtggaatttattttcttcttaatgtgtCTGACccaaccagttgtgttgtgacaagataatTGTAGACAAGCCAATTGTAccattttttttcccccaaagCAAGATTTTGTTACATGTAGAACCATCGTTCTGTCTGTAATTCTTAAAAGTATCTGTCAGTAAATCCTTCTATGTAAAACTTTTAATCATTCTCTATCCTTGATATATTTGGTTACATGAGGAATAACTAATTCACACAATAGTTCTTAACATTTCACACAAAATAATTACTGTTCACAGGCATCTCAACTGTCTAAAAAAGTGAGAGAACATATTTGCTAACATAACACATTGGTCAAGGTGAACACTTCTCTGGCCTATTTAAGAAAATGGATGTTTTGCGTATGATTATAAAAACACTTGAGAATACCATACTTGTGTGAATTTTCAAATACTATTGTGGTTTGTTTCATATGTATGATTATTTTAATTGTTTCCTTTATTACCAAGGCATTAATAAACGCTGTCTTCATCAGCCATCAAACAATGTAAATCTATTGTACTTTGTGGTATTAGTACCATTCAAATTAAAAATTGTTGCTGTGTCATATTGTTGCCTTATTCTTACTTCTAGAATGCTTTGAGTAGGGCCTAAATAGAACAACAGTAGTAGACATGGTTTGTAACAAGCGGAACTCCCAAAACAACA

Function

NR:

description
uncharacterized protein LOC110538022

GO: NA

KEGG:

id description
K13051 ASRGL1, iaaA; L-asparaginase / beta-aspartyl-peptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021624555.2 True 6068 mRNA 0.49 4 64430505 64438581

Neighbor

gene id symbol gene type direction distance location
LOC110538020 LOC106600890 coding upstream 14432 64407373 ~ 64416073 (+)
si:dkey-110g7.8 LOC106600891 coding upstream 54149 64369958 ~ 64376356 (+)
LOC110538012 LOC106600897 coding upstream 187552 64232139 ~ 64242953 (+)
baiap2l2a LOC106600898 coding upstream 258327 64142855 ~ 64172178 (+)
LOC110538933 LOC106600901 coding upstream 521832 63888086 ~ 63908673 (+)
LOC110538024 LOC106600885 coding downstream 5179 64443760 ~ 64445157 (+)
LOC110538023 LOC106600884 coding downstream 20716 64459297 ~ 64461117 (+)
LOC110538025 LOC105029658 coding downstream 31535 64470116 ~ 64475411 (+)
LOC110539154 tex33 coding downstream 37131 64475712 ~ 64478125 (+)
il2rb il2rb1 coding downstream 46497 64485078 ~ 64490661 (+)
G1099258 LOC106600887 non-coding upstream 3783 64425645 ~ 64426722 (+)
G1099241 NA non-coding upstream 51994 64378311 ~ 64378511 (+)
G1099187 LOC106600892 non-coding upstream 70643 64349651 ~ 64359862 (+)
G1099213 NA non-coding upstream 93033 64337217 ~ 64337472 (+)
G1099203 NA non-coding upstream 106280 64324006 ~ 64324225 (+)
G1099280 LOC105030512 non-coding downstream 23813 64462394 ~ 64462760 (+)
G1099325 LOC106600973 non-coding downstream 105927 64544508 ~ 64548249 (+)
G1099336 NA non-coding downstream 122068 64560649 ~ 64566188 (+)
G1099326 LOC106600880 non-coding downstream 150398 64588979 ~ 64613235 (+)
G1099365 NA non-coding downstream 176072 64614653 ~ 64614954 (+)
G1097122 NA other upstream 175441 64254612 ~ 64255064 (+)
G1097116 NA other upstream 201821 64228001 ~ 64228684 (+)
G1097063 NA other upstream 293801 64136358 ~ 64136704 (+)
G1100432 NA other downstream 994559 65433140 ~ 65433457 (+)
LOC110538063 abi1 other downstream 1710628 66148710 ~ 66168256 (+)
LOC110538072 psd3 other downstream 2223383 66661875 ~ 66670815 (+)
G1101805 NA other downstream 2286080 66724661 ~ 66822261 (+)
G1102021 NA other downstream 2620154 67058735 ~ 67059407 (+)

Expression


Co-expression Network