Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110538025 |
| gene name | LOC105029658 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 64470116 ~ 64475411 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: SUMO-conjugating enzyme UBC9 |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0019789 | SUMO transferase activity | molecular_function |
| id | description |
|---|---|
| K10577 | UBE2I, UBC9; ubiquitin-conjugating enzyme E2 I |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021624559.2 | False | 1348 | mRNA | 0.40 | 7 | 64470116 | 64475411 |
| XM_021624560.2 | True | 1426 | mRNA | 0.39 | 7 | 64470265 | 64475411 |
64,468,000
64,469,000
64,470,000
64,471,000
64,472,000
64,473,000
64,474,000
64,475,000
64,476,000
64,477,000
64,478,000
64,479,000
64,480,000
64,481,000
64,482,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538023 | LOC106600884 | coding | upstream | 8999 | 64459297 ~ 64461117 (+) |
| LOC110538024 | LOC106600885 | coding | upstream | 24959 | 64443760 ~ 64445157 (+) |
| LOC110538022 | LOC106600886 | coding | upstream | 31535 | 64430505 ~ 64438581 (+) |
| LOC110538020 | LOC106600890 | coding | upstream | 54043 | 64407373 ~ 64416073 (+) |
| si:dkey-110g7.8 | LOC106600891 | coding | upstream | 93760 | 64369958 ~ 64376356 (+) |
| LOC110539154 | tex33 | coding | downstream | 301 | 64475712 ~ 64478125 (+) |
| il2rb | il2rb1 | coding | downstream | 9667 | 64485078 ~ 64490661 (+) |
| c1qtnf6a | c1qtnf6 | coding | downstream | 47427 | 64522838 ~ 64537399 (+) |
| crhr1 | LOC106600876 | coding | downstream | 475620 | 64951031 ~ 65117379 (+) |
| cdc27 | LOC106600875 | coding | downstream | 775043 | 65250454 ~ 65283926 (+) |
| G1099280 | LOC105030512 | non-coding | upstream | 7356 | 64462394 ~ 64462760 (+) |
| G1099258 | LOC106600887 | non-coding | upstream | 43394 | 64425645 ~ 64426722 (+) |
| G1099241 | NA | non-coding | upstream | 91605 | 64378311 ~ 64378511 (+) |
| G1099187 | LOC106600892 | non-coding | upstream | 110254 | 64349651 ~ 64359862 (+) |
| G1099213 | NA | non-coding | upstream | 132644 | 64337217 ~ 64337472 (+) |
| G1099325 | LOC106600973 | non-coding | downstream | 69097 | 64544508 ~ 64548249 (+) |
| G1099336 | NA | non-coding | downstream | 85238 | 64560649 ~ 64566188 (+) |
| G1099326 | LOC106600880 | non-coding | downstream | 113568 | 64588979 ~ 64613235 (+) |
| G1099365 | NA | non-coding | downstream | 139242 | 64614653 ~ 64614954 (+) |
| G1099377 | NA | non-coding | downstream | 160797 | 64636208 ~ 64652489 (+) |
| G1097122 | NA | other | upstream | 215052 | 64254612 ~ 64255064 (+) |
| G1097116 | NA | other | upstream | 241432 | 64228001 ~ 64228684 (+) |
| G1097063 | NA | other | upstream | 333412 | 64136358 ~ 64136704 (+) |
| LOC110538933 | LOC106600901 | other | upstream | 579559 | 63888086 ~ 63908673 (+) |
| G1100432 | NA | other | downstream | 957729 | 65433140 ~ 65433457 (+) |
| LOC110538063 | abi1 | other | downstream | 1673798 | 66148710 ~ 66168256 (+) |
| LOC110538072 | psd3 | other | downstream | 2186553 | 66661875 ~ 66670815 (+) |
| G1101805 | NA | other | downstream | 2249250 | 66724661 ~ 66822261 (+) |
| G1102021 | NA | other | downstream | 2583324 | 67058735 ~ 67059407 (+) |
