Gene
RNA
| Item | Value |
|---|---|
| gene id | itga2b |
| gene name | LOC106600877 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 64732080 ~ 64746292 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| integrin alpha-IIb-like |
| id | name | namespace |
|---|---|---|
| GO:0001525 | angiogenesis | biological_process |
| GO:0007596 | blood coagulation | biological_process |
| GO:0001935 | endothelial cell proliferation | biological_process |
| GO:0008305 | integrin complex | cellular_component |
| GO:0005515 | protein binding | molecular_function |
| id | description |
|---|---|
| K06476 | ITGA2B, CD41; integrin alpha 2B |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021624569.2 | True | 3892 | mRNA | 0.51 | 31 | 64732080 | 64746292 |
64,720,000
64,722,000
64,724,000
64,726,000
64,728,000
64,730,000
64,732,000
64,734,000
64,736,000
64,738,000
64,740,000
64,742,000
64,744,000
64,746,000
64,748,000
64,750,000
64,752,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fam171a2a | LOC106600878 | coding | downstream | 211 | 64667408 ~ 64731869 (-) |
| syngr1a | LOC106600879 | coding | downstream | 65167 | 64640531 ~ 64666913 (-) |
| LOC110538028 | LOC106600880 | coding | downstream | 107704 | 64585301 ~ 64624376 (-) |
| LOC110538027 | LOC106600973 | coding | downstream | 174045 | 64544500 ~ 64558035 (-) |
| mief1 | LOC106600887 | coding | downstream | 304137 | 64419382 ~ 64427943 (-) |
| LOC110538935 | LOC106600972 | coding | upstream | 554 | 64746846 ~ 64749051 (-) |
| LOC110538032 | LOC106600971 | coding | upstream | 483200 | 65229492 ~ 65233281 (-) |
| LOC110539155 | NA | coding | upstream | 487178 | 65233470 ~ 65234629 (-) |
| maptb | LOC106600872 | coding | upstream | 623571 | 65369863 ~ 65410820 (-) |
| myl4 | LOC106600870 | coding | upstream | 671768 | 65418060 ~ 65422031 (-) |
| G1099608 | NA | non-coding | downstream | 151165 | 64494115 ~ 64580915 (-) |
| G1099595 | NA | non-coding | downstream | 206251 | 64469163 ~ 64525829 (-) |
| G1099606 | il2rb1 | non-coding | downstream | 241415 | 64485073 ~ 64490665 (-) |
| G1099600 | NA | non-coding | downstream | 254374 | 64476968 ~ 64477706 (-) |
| G1099592 | NA | non-coding | downstream | 269043 | 64462834 ~ 64463037 (-) |
| G1099791 | NA | non-coding | upstream | 52741 | 64799033 ~ 64799265 (-) |
| G1099808 | NA | non-coding | upstream | 66993 | 64813285 ~ 64813588 (-) |
| G1099835 | NA | non-coding | upstream | 83503 | 64829795 ~ 64830074 (-) |
| G1099850 | NA | non-coding | upstream | 97563 | 64843855 ~ 64844169 (-) |
| G1099855 | NA | non-coding | upstream | 99399 | 64845691 ~ 64845903 (-) |
| G1099535 | NA | other | downstream | 364310 | 64367415 ~ 64367770 (-) |
| G1099482 | LOC106600895 | other | downstream | 400009 | 64326899 ~ 64332071 (-) |
| G1099144 | LOC105893191 | other | downstream | 510508 | 64220968 ~ 64221572 (-) |
| G1099090 | LOC105030512 | other | downstream | 591168 | 64140462 ~ 64140912 (-) |
| lmx1al | LOC106600915 | other | downstream | 1046271 | 63659040 ~ 63685854 (-) |
| G1099816 | NA | other | upstream | 72087 | 64818379 ~ 64818729 (-) |
| LOC118937713 | ifn1 | other | upstream | 1154081 | 65900373 ~ 65904872 (-) |
| G1101510 | NA | other | upstream | 1440567 | 66186859 ~ 66187244 (-) |
| LOC110538067 | LOC106607530 | other | upstream | 1472824 | 66219116 ~ 66223229 (-) |
| G1102331 | psd3 | other | upstream | 1918997 | 66665289 ~ 66666338 (-) |
