Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110539155 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 65233470 ~ 65234629 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106600971 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035301.1 | True | 648 | mRNA | 0.46 | 4 | 65233470 | 65234629 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538032 | LOC106600971 | coding | downstream | 189 | 65229492 ~ 65233281 (-) |
| LOC110538935 | LOC106600972 | coding | downstream | 484419 | 64746846 ~ 64749051 (-) |
| itga2b | LOC106600877 | coding | downstream | 487178 | 64732080 ~ 64746292 (-) |
| fam171a2a | LOC106600878 | coding | downstream | 501601 | 64667408 ~ 64731869 (-) |
| syngr1a | LOC106600879 | coding | downstream | 566557 | 64640531 ~ 64666913 (-) |
| maptb | LOC106600872 | coding | upstream | 135234 | 65369863 ~ 65410820 (-) |
| myl4 | LOC106600870 | coding | upstream | 183431 | 65418060 ~ 65422031 (-) |
| LOC110538053 | LOC106600970 | coding | upstream | 317663 | 65552292 ~ 65553298 (-) |
| LOC118937708 | LOC106600964 | coding | upstream | 328304 | 65562933 ~ 65564494 (-) |
| LOC110538047 | LOC106600965 | coding | upstream | 335094 | 65569723 ~ 65570729 (-) |
| G1100557 | NA | non-coding | downstream | 6399 | 65226607 ~ 65227071 (-) |
| G1100538 | NA | non-coding | downstream | 38031 | 65195180 ~ 65195439 (-) |
| G1100529 | NA | non-coding | downstream | 46663 | 65186428 ~ 65186807 (-) |
| G1100520 | NA | non-coding | downstream | 60553 | 65172619 ~ 65172917 (-) |
| G1100249 | NA | non-coding | downstream | 113946 | 65118855 ~ 65119524 (-) |
| G1100572 | NA | non-coding | upstream | 11605 | 65246234 ~ 65246473 (-) |
| G1100577 | NA | non-coding | upstream | 18998 | 65253627 ~ 65253830 (-) |
| G1100590 | NA | non-coding | upstream | 29163 | 65263792 ~ 65263996 (-) |
| G1100604 | NA | non-coding | upstream | 157209 | 65391838 ~ 65392561 (-) |
| G1100701 | NA | non-coding | upstream | 203629 | 65438258 ~ 65438528 (-) |
| G1099816 | NA | other | downstream | 414741 | 64818379 ~ 64818729 (-) |
| G1099535 | NA | other | downstream | 865700 | 64367415 ~ 64367770 (-) |
| G1099482 | LOC106600895 | other | downstream | 901399 | 64326899 ~ 64332071 (-) |
| G1099144 | LOC105893191 | other | downstream | 1011898 | 64220968 ~ 64221572 (-) |
| G1099090 | LOC105030512 | other | downstream | 1092558 | 64140462 ~ 64140912 (-) |
| LOC118937713 | ifn1 | other | upstream | 665744 | 65900373 ~ 65904872 (-) |
| G1101510 | NA | other | upstream | 952230 | 66186859 ~ 66187244 (-) |
| LOC110538067 | LOC106607530 | other | upstream | 984487 | 66219116 ~ 66223229 (-) |
| G1102331 | psd3 | other | upstream | 1430660 | 66665289 ~ 66666338 (-) |
| LOC110539163 | NA | other | upstream | 1664167 | 66898754 ~ 66914768 (-) |
