LOC110538185 (kbrs2)


Basic Information

Item Value
gene id LOC110538185
gene name kbrs2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 70044585 ~ 70048245 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036938243.1
AGAATTACTAGTGGTAGGAATATATTAGCTAGGCCCAGCGTCATTAATGTATGGATCTGGCTAGGCCTAGCTGACAACCTCGGATACattcacagtaaaaaaaaatggcTCACCCTTCAGGCATACCAAGAAGACCATGTCAGTCAATAAGTTGCCAAGAGACTGATCATCATCATGGGCAAGAGTTGTAAAGTGGTGGTGTGTGGTCTGGCTGCCGTTGGCAAGACTGCTGTCCTGGAGCAACTGCTGTATGCCAATCATATTGCGGGCTCAGAGCCCATGGAGACCCTGGAGGATATCTATATTGGCTCCATAGAAACAGACCGTGGCACTCGAGAGCAAGTGCGCTTCTACGACACCCGGGGTCTTCGTGATGGTCTGGAGTTCCCTCGCCACTACTTCTTCTTTGCGGACGGTTTTGTTCTGGTCTACAGCATCGACAGTAAGGAGTCCTTCAAACGCATGGAGGCCCTCAAGAAAGACATTGACCGCTACCGTGATAAGAAAGAGGTGAACATAGTGGTGCTGGGCAACAAGCTAGACAtgcaggagcagaggagagtggACTCTGAAGTGGCCCAGTACTGGGCCAAGACAGAAAAGGTGCGTCTGTGGGAGGTGTCTGTGGCTGACCGGAGGACCCTCATCGAGCCTTTTGTCCACCTGGCCAGCAAGATGACCCAGCCCCAGAGCAAATCATCCTTCCCCCTCAGCCGCAATAAGAACAAGGGGAGTGGCTCTGTCGATAGCTGAGGGATTAggggggatggaagagagagtgaggattGATGAAGAATGTGAAAAAGTAGTAGGGGAAACGCAATAGACTGATTGTTAGCCTATCACAAATACAGACAATTTTATGTCTGCACAAATGTACACCGACTGAAACAAATGGTTTCATGGAGATTTTGACAGATATTTAAACTCATATTTGACCATTTAGACTGATCTTTGACGACAAGTAAATGTTGACATCAAAAGTAACGAATGGATAATCAAGAGGGTTGTTTGTATCATGGAGGATACATAAGGGATTATATTACTGTTAGTTAATCAGGAGATTTGTTACACTACTGGCATGCCATCTACTCAGATGAAATATGGAAACTATTTTAGCATGGATGATCTGAATTTTATTTTAAGTTAGAGTACATGAAACAaatccatatttatttatttttgaatcacttttttcccccaatttcgtagtatccaattattagtagttactatcttgtctcatcgctacaactcccgtacgggctcgggagagacgaaggtc
>XM_021624826.2
tgaagacGTTACGTATTGTAAACAGGAAGTATTTTTGGATAGTGGTGTCTGGAATTTACGGGAGCGCTGTATTTACATTTTAAAGAGTTGCCAAGAGACTGATCATCATCATGGGCAAGAGTTGTAAAGTGGTGGTGTGTGGTCTGGCTGCCGTTGGCAAGACTGCTGTCCTGGAGCAACTGCTGTATGCCAATCATATTGCGGGCTCAGAGCCCATGGAGACCCTGGAGGATATCTATATTGGCTCCATAGAAACAGACCGTGGCACTCGAGAGCAAGTGCGCTTCTACGACACCCGGGGTCTTCGTGATGGTCTGGAGTTCCCTCGCCACTACTTCTTCTTTGCGGACGGTTTTGTTCTGGTCTACAGCATCGACAGTAAGGAGTCCTTCAAACGCATGGAGGCCCTCAAGAAAGACATTGACCGCTACCGTGATAAGAAAGAGGTGAACATAGTGGTGCTGGGCAACAAGCTAGACAtgcaggagcagaggagagtggACTCTGAAGTGGCCCAGTACTGGGCCAAGACAGAAAAGGTGCGTCTGTGGGAGGTGTCTGTGGCTGACCGGAGGACCCTCATCGAGCCTTTTGTCCACCTGGCCAGCAAGATGACCCAGCCCCAGAGCAAATCATCCTTCCCCCTCAGCCGCAATAAGAACAAGGGGAGTGGCTCTGTCGATAGCTGAGGGATTAggggggatggaagagagagtgaggattGATGAAGAATGTGAAAAAGTAGTAGGGGAAACGCAATAGACTGATTGTTAGCCTATCACAAATACAGACAATTTTATGTCTGCACAAATGTACACCGACTGAAACAAATGGTTTCATGGAGATTTTGACAGATATTTAAACTCATATTTGACCATTTAGACTGATCTTTGACGACAAGTAAATGTTGACATCAAAAGTAACGAATGGATAATCAAGAGGGTTGTTTGTATCATGGAGGATACATAAGGGATTATATTACTGTTAGTTAATCAGGAGATTTGTTACACTACTGGCATGCCATCTACTCAGATGAAATATGGAAACTATTTTAGCATGGATGATCTGAATTTTATTTTAAGTTAGAGTACATGAAACAaatccatatttatttatttttgaatcacttttttcccccaatttcgtagtatccaattattagtagttactatcttgtctcatcgctacaactcccgtacgggctcgggagagacgaaggtc

Function

NR:

description
NF-kappa-B inhibitor-interacting Ras-like protein 2 isoform X1

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K17197 NKIRAS; NF-kappa-B inhibitor-interacting Ras-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036938243.1 False 1285 mRNA 0.45 4 70044585 70048245
XM_021624826.2 True 1221 mRNA 0.45 4 70046268 70048245

Neighbor

gene id symbol gene type direction distance location
LOC110539166 LOC106601013 coding upstream 77097 69965506 ~ 69967488 (+)
LOC110538177 LOC106607277 coding upstream 87065 69952422 ~ 69957520 (+)
LOC110538175 LOC106601009 coding upstream 109207 69907421 ~ 69935378 (+)
LOC110538173 LOC106607273 coding upstream 169555 69823215 ~ 69875030 (+)
LOC110538170 LOC106601006 coding upstream 224768 69799674 ~ 69819817 (+)
LOC118937908 NA coding downstream 333924 70382169 ~ 70382221 (+)
LOC110538197 LOC106601026 coding downstream 592719 70640964 ~ 70664813 (+)
LOC110538199 LOC106607392 coding downstream 685994 70734239 ~ 70736353 (+)
si:ch73-141c7.1 LOC106601031 coding downstream 697290 70745535 ~ 70750237 (+)
LOC110538201 LOC106601034 coding downstream 704269 70752514 ~ 70754545 (+)
G1105198 LOC106607285 non-coding upstream 3254 70037408 ~ 70041331 (+)
G1105173 NA non-coding upstream 68150 69975590 ~ 69976435 (+)
G1104841 NA non-coding upstream 107244 69936898 ~ 69937341 (+)
G1105129 NA non-coding upstream 108070 69891218 ~ 69936515 (+)
G1105197 NA non-coding downstream 7795 70056040 ~ 70058980 (+)
G1105291 NA non-coding downstream 135056 70183301 ~ 70183868 (+)
G1105304 NA non-coding downstream 165042 70213287 ~ 70213629 (+)
G1105317 NA non-coding downstream 191497 70239742 ~ 70239956 (+)
G1105322 NA non-coding downstream 206839 70255084 ~ 70255358 (+)
LOC110538155 LOC106600992 other upstream 726937 69315451 ~ 69321518 (+)
G1104162 NA other upstream 1512724 68528281 ~ 68531861 (+)
G1104149 LOC106600798 other upstream 1539290 68504041 ~ 68505295 (+)
G1103416 eif1b other upstream 2036108 67987694 ~ 68048717 (+)
G1105281 NA other downstream 114444 70162689 ~ 70194672 (+)
G1105357 NA other downstream 276713 70324958 ~ 70327126 (+)
G1105393 NA other downstream 322510 70370755 ~ 70371211 (+)
G1105467 LOC106601028 other downstream 564058 70612303 ~ 70633971 (+)
G1105655 NA other downstream 854660 70902905 ~ 70906429 (+)

Expression


Co-expression Network