Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110538202 |
| gene name | LOC106601032 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 70752569 ~ 70775014 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| myosin light chain kinase, smooth muscle-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036938258.1 | False | 3383 | mRNA | 0.52 | 17 | 70757919 | 70775014 |
| TU1258890 | False | 1490 | lncRNA | 0.44 | 2 | 70752569 | 70758166 |
| TU1258892 | False | 1004 | lncRNA | 0.45 | 3 | 70752569 | 70754536 |
| TU1258891 | False | 918 | lncRNA | 0.42 | 2 | 70753861 | 70758166 |
| TU1258896 | False | 918 | lncRNA | 0.42 | 2 | 70753861 | 70758166 |
| TU1258897 | True | 612 | TUCP | 0.50 | 3 | 70759915 | 70760987 |
70,732,000
70,736,000
70,740,000
70,744,000
70,748,000
70,752,000
70,756,000
70,756,000
70,760,000
70,764,000
70,768,000
70,772,000
70,776,000
70,780,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538198 | LOC106601029 | coding | downstream | 70112 | 70671846 ~ 70687807 (-) |
| LOC110538196 | LOC106601028 | coding | downstream | 123922 | 70612291 ~ 70633997 (-) |
| LOC110538194 | LOC106601025 | coding | downstream | 147950 | 70587166 ~ 70609969 (-) |
| LOC110538192 | sta5b | coding | downstream | 188900 | 70475743 ~ 70569019 (-) |
| LOC110538191 | LOC106601024 | coding | downstream | 293006 | 70375985 ~ 70464913 (-) |
| LOC110538204 | LOC106601035 | coding | upstream | 25353 | 70800367 ~ 70804955 (-) |
| LOC110538206 | LOC106601037 | coding | upstream | 44149 | 70819163 ~ 70827825 (-) |
| LOC110538207 | LOC106607308 | coding | upstream | 130100 | 70905114 ~ 70935673 (-) |
| LOC110538211 | LOC106601043 | coding | upstream | 235032 | 71010046 ~ 71016433 (-) |
| LOC110538957 | LOC106607314 | coding | upstream | 269199 | 71044213 ~ 71069530 (-) |
| G1107222 | NA | non-coding | downstream | 89833 | 70667861 ~ 70668086 (-) |
| G1107213 | NA | non-coding | downstream | 104199 | 70653150 ~ 70653720 (-) |
| G1107210 | LOC106601026 | non-coding | downstream | 105108 | 70649873 ~ 70652811 (-) |
| G1107195 | NA | non-coding | downstream | 135028 | 70622515 ~ 70622891 (-) |
| G1107186 | NA | non-coding | downstream | 171908 | 70585763 ~ 70586011 (-) |
| G1107312 | NA | non-coding | upstream | 87160 | 70862174 ~ 70862437 (-) |
| G1107313 | NA | non-coding | upstream | 87505 | 70862519 ~ 70862841 (-) |
| G1107380 | NA | non-coding | upstream | 203140 | 70978154 ~ 70978376 (-) |
| G1107381 | NA | non-coding | upstream | 203562 | 70978576 ~ 70978837 (-) |
| G1107382 | NA | non-coding | upstream | 204186 | 70979200 ~ 70979417 (-) |
| G1107004 | NA | other | downstream | 520318 | 70237094 ~ 70237601 (-) |
| G1106634 | NA | other | downstream | 1260957 | 69496640 ~ 69496962 (-) |
| G1106463 | rl19 | other | downstream | 1589031 | 69166461 ~ 69168888 (-) |
| LOC110538128 | LOC106600798 | other | downstream | 2254013 | 68495125 ~ 68517925 (-) |
| LOC110538106 | wipf2 | other | downstream | 2892277 | 67860396 ~ 67867954 (-) |
| G1107481 | NA | other | upstream | 369641 | 71144655 ~ 71147165 (-) |
| G1107536 | NA | other | upstream | 537245 | 71312259 ~ 71313001 (-) |
| nudt1 | 8odp | other | upstream | 871784 | 71646624 ~ 71648371 (-) |
| G1108159 | NA | other | upstream | 1362679 | 72137693 ~ 72138603 (-) |
| LOC110538254 | snn | other | upstream | 1508180 | 72283033 ~ 72285611 (-) |
| LOC110538202 | LOC106601032 | other | upstream | 1749 | 70752569 ~ 70775014 (-) |
