rmi2 (cp075)


Basic Information

Item Value
gene id rmi2
gene name cp075
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 72285711 ~ 72287272 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021624962.2
CCCGGAAATTGGTCACAATTACGTCAAAGGTCACACGAAATATTTTTTTGAACTAACTCGTTTGAAAGGTTTCACTCGCATATGGCATGGACTCAGGACAAATTTCAGGCGAAAATAAGAAAAGTCCTCCTATTAAAGTTCTTTCCAGCCAACTCCGAGAGGGAAAAGATAGCCGATTGAATGGCAAGCTCGAATTTAACATAAAAAGACTGGGACAATTGAAAAATACTGCACTTGTAGTCTCTGTGGTTTGGATGCAAGGGACAATACTGGAAGTTAGGTCCGATCACAACACGGTTCTTCTTTTGGATGAGACCGGGACATTCGTTGTCAATGGCGTCAACAACATTCCCAAGGGCAACCCATGCCTACTTCAGGGTAACTATGTCATGGTGATGGGGATGATCCAGGCCCTCTCTCCAGAACCTGTCCTTCGCGCGGTAAAGATGGCAGACCTTTCTGAACGTGCTGCGATTCACAGAAAAATGTGGACGTTGGAGGTGGAAGACCTTCAGCAAACACTCACGTAGAAAGAAGCATGAGCAGTATGTTGATATCAATGCCTGtttgttttcatttatttttatcaaaatgtAAATATTGCTACTGGTTTTGAGCGGTTTCTGGCCTGCCAGATATTTCATTGCCAAAGGTAATGGATCATAGCCTAGAAGTACGTGCCCATCACCGTTTATGATAAAGTgcattatatgcatatattatagCCTAACGCTGTTTATGATAggctataattaagcaataaggcacgagggggtctggtatatggtcaatataccatggctacgGGCTGTTTTGTCATACGCTTAGTatactgtcagccaatcagcattcagtgctcgaaccacccagtttataatatatgcatataacaCACTAAACATGTCAGAAGTGCTGGAGGAGGGTTATGATGGGGAAAAAAAGCTAGTCCGGGCAAGAAAGCACAAACTCAAACAAAAGACAAAGAATTTAAATTAAAGAATGAACAATGATCTCATTTGGTGGTAAAATTATCTATTTTATTTGTGCTTATGTCATGCATACACATTGAAAAAGTGCCATTAAGGGAATTCTACAGAAGCACACAATTGTATGTGATGAATTAAAATAAATGGGGCCTATACAATCAATGACACCCTTGTAAATCCATGGACTTGGGAACGCTCCAAGGTGCCTGGATTTCAATCAAAACATCCTGAAATAAGACTTCTTCTGCAGCATAACCACTCATTCATTCAACCTAAAGGCATTTAGGCCTAAGACAACAGATCTATATATCTCTTGAAAAAAAAAGAAGCAAGCAATTACGCACCATAAAAGTATTTAACAATTTAAAATGAATCTTGATATGTAATACCCCTCCCTGTCTGTTAGGTttatgtactcttgtttgtatatttctgggttgtttttgtatttgttgtgttcATAATAAAAATACTTTTACAGTA

Function

NR:

description
recQ-mediated genome instability protein 2

GO:

id name namespace
GO:0003677 DNA binding molecular_function

KEGG:

id description
K15365 RMI2; RecQ-mediated genome instability protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021624962.2 True 1469 mRNA 0.39 2 72285711 72287272
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110538254 snn coding downstream 100 72283033 ~ 72285611 (-)
LOC110538252 LOC106601151 coding downstream 23949 72258667 ~ 72261762 (-)
LOC110538248 LOC106607340 coding downstream 63092 72180790 ~ 72222619 (-)
LOC110538246 NA coding downstream 154720 72130262 ~ 72130991 (-)
uncx LOC106601117 coding downstream 169571 72107103 ~ 72116140 (-)
LOC110538255 LOC106607344 coding upstream 572 72287844 ~ 72290302 (-)
LOC110538258 LOC106607344 coding upstream 3040 72290312 ~ 72299863 (-)
ubfd1 LOC106601113 coding upstream 12738 72300010 ~ 72303236 (-)
il4r2 il4r2 coding upstream 40904 72328176 ~ 72332410 (-)
kdm8 kdm8 coding upstream 54272 72341544 ~ 72346086 (-)
G1108863 NA non-coding downstream 11980 72273395 ~ 72273731 (-)
G1108241 NA non-coding downstream 28950 72256356 ~ 72256761 (-)
G1108235 NA non-coding downstream 34244 72251268 ~ 72251467 (-)
G1108158 NA non-coding downstream 148084 72137426 ~ 72137627 (-)
G1108877 NA non-coding upstream 25141 72312413 ~ 72363671 (-)
G1108887 NA non-coding upstream 53257 72340529 ~ 72377444 (-)
LOC110538263 kdm8 non-coding upstream 94925 72381011 ~ 72385372 (-)
G1108922 NA non-coding upstream 121787 72409059 ~ 72409279 (-)
G1108935 NA non-coding upstream 137472 72424744 ~ 72425071 (-)
G1108159 NA other downstream 147108 72137693 ~ 72138603 (-)
nudt1 8odp other downstream 637348 71646624 ~ 71648371 (-)
G1107536 NA other downstream 972710 71312259 ~ 71313001 (-)
G1107481 NA other downstream 1138546 71144655 ~ 71147165 (-)
LOC110538266 LOC106601105 other upstream 495361 72778068 ~ 72800352 (-)
G1109275 NA other upstream 636885 72924157 ~ 72925251 (-)
G1109389 LOC106601099 other upstream 785620 73072892 ~ 73081402 (-)
LOC110538455 LOC106601085 other upstream 1181139 73462257 ~ 73510350 (-)
G1110369 hbb1 other upstream 1294922 73582194 ~ 73595358 (-)

Expression

rmi2(cp075) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 40.
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rmi2(cp075) Expression in each Bioproject

Bar chart with 21 bars.
rmi2(cp075) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
End of interactive chart.

Co-expression Network