XLOC_002929 (or109-7)


Basic Information

Item Value
gene id XLOC_002929
gene name or109-7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 36217239 ~ 36220061 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005413
GAATAGCAACATTGTGGAAGCTTTGCAGAAGGTAGAGTATATAAAACATGCACTGCTTCTTCTCTATGATTCTGTTCTTGCtcaattactttttattattgtttgatgGGGTTatttcaaaaaatgaaaaatgatatGACATGAAAATAGTTAAATAGTAATTACTAaattaatataatgaaaatacattatttGAATAATCTCTgtaattgaatgcatttttatgATGTTCCATCACAGTTCACACTAAAAACCTGGAACAAATATCATGAGCTCAATGGATTCCAACTCTTCTGCAAATGTGGCTTTTGTTCGTCCTGCAACATTTTTCCTTAATGGATTTTCAAATTTTCCACATGCAAAATACTACTATTTGTTCTTGTCATTGGTGTATGCTGTGACTGTTTTGGAGAATTCATTTAtcatgtgtattatttatttgtccCGCAGACTTCACACAGCCAAATATATTGCTGTTTTTCATTTGGCTCTTTGTGATCTGTGTGGAAGCTCAGCTGTGATTCCAAAAGTCgttgatacatttttatttgaccaccaggacatttcatatgcagcatgcatggctaatatattttttgtttttcattttatgaaTGTGCAGTCTTTGACACTACTTGTCATGGCTTATGACAGACTGGTCGCCATTTGTTTTCCTTTAAGATATCATGAGATTGTAACCAAAACATCCATGCTGCTGATATTAGGAGTGATATGGacattttctctaatatttttttctgtgtttgtagATTCTATAAATAGACTCTCTTTTTGCAGAACTAACGTGATTAATAATTATTTCTGTGATTATTGTACTGTCTACAGACTAGCTTGTAATGATAATTCTATAAATATTTTGATGGGAAAACTTGGGAATGATCTCCTTATTTTTACGCCACTGATATTAGTCTTCATTTCATATTTCTGCATTTCTCTGGCTTTGTTTAAAATTGCTCATGCTGTTGACCGGACCAAAGCCATAAAAACATGCACCACACATCTCATGTTAGTGGCAATTTTTTATATTCCAATTTTAAGCAATAATATTGCAGCTTTAACAACACCGTTCACTTCAGACATTCAGATAATAAACAATTCCCTGACACAGACAATACCACCTATGCTGAATCCCATCATATACACTCTAAAGACAGACGAGGTTATGCAATCTGTAAAAGAACTGTACAAACGCAGTAGAATGAACACAATTAgagtaagtaaaacaaaatgctgAAAGAGAAATAAAAACGTTTACCAGCTTAATATATTTGCTGATTACCAATGATTTTTAACAGTACCTAATTGGTTTTGCCAATTTTGTTTTACACCTCTGAGCTAAAACCCATAGTAGCTATTCTTTAATTGCAtgttttgttcaaaataaaatgcaaataatttgTGGCaccacattaaagttaattttctgttaaaaataaatcaacagagaatatttttcattaaattttttcgTTTTAGAAACGCTTCTGCATCATGTTTGTTATAATCATGAACCATGTTTTTAAACTGTTGTGTATTGCTAATTAGTTGACCAACAGAGAGTTTGTGAATTGAATAGTCTTGAATAGACTTTCATTACAAGTGATCAATGAACCTTTCAATCACCAaaagtaataaaatcactgcaCAACAGCATAGCGCCAGCACATGGTACACAATGCTATATGAAAGCTATTGCATAGATAAACCCACCCAGAGTATAACACAATGGTAttctaacataaataaatatgtatatgtaaaataaaagacaCAGGGCACATCTTATTCACctacatatgtatatttgtgaaattaaaaacaattcaccaaaaaaaaaaaaaaaaaggttaacttTTGTTGTTTACTCAGATTTGTATTATCCCAAACCTGTACTGCATTACAGGAAATAAGGTATTTTGAAAGTCAACACGGTCTAAACAACATTTTGTCCAAATGACAGCAACATCACTGATTTGTCTGCATACGCAAGTAAGCTAGATTTGGAATTATTTGAGCCCAAAGTGAAAAGAAACAGTTGGAGGTCTTAAACCGGCAGGATAAAAAGCTTGGGTGGCACAGACGGGGCAAGGAATTGGATTGAGACTGGCAGGGCAAGAAGCTTGGACAGCTGACATTAAGCCACATACAGTTGCTGGAGCAATTACTGGCAGGTGTGCTGGGGCTGGAGCCAACACTGAACCGGGCCAGCAATGCCATCTGGCTCTTCATGAACTGGATCTGGGCCTGAATCAACCATGCCCTTTAGGGCTGCAGAAACTGGATTGGGGCCTGAGTCAACAATGCCCCCCCAGGGAGGCAAAAACTGGATTGTAGCCTGACACAACAATCCCCTCTGGGGCTGGAGAAACTGAATTGTGGGTTTCAGCAGGAGGAGAAATTCTGGGAACTGGAGGGGGTCTATGGCAACATGGTAGCAAAACAAACACTACAAACAAAACATTGGGGTTAAcaaaaatgaaaagcaaacaGATAAACAGATCAAGGAGTTGCTGTGTTGGTTAGGTCTTGTGTCACAATATAGCTGAGGTAATGAGAAGAGTTTGTAGGAATAAAGTAAAAGCATTGTttagcaacgtggacacctccaaatggtgttgaatgagtcacataatgtatttataagatttaattcaccccaaaaatgtaatttctgtcttcatgtaatgtatttgtgaCCGCAAAAttacacgtgacgtgagctgacggtcagctgttaccacagagagggcggaCGCACGTGCACCTCTGAATAATGTTTTCTTCAGTGACCAGAACAGGCAT

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004984 olfactory receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070806-70 Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000100269

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005413 True 2823 mRNA 0.36 1 36217239 36220061

Neighbor

gene id symbol gene type direction distance location
XLOC_002928 or109-11 coding downstream 2657 36212575 ~ 36214582 (-)
XLOC_002927 or109-13 coding downstream 9502 36205211 ~ 36207737 (-)
XLOC_002926 BX088524.4 coding downstream 53945 36163179 ~ 36163294 (-)
XLOC_002925 NA coding downstream 123706 35811752 ~ 36093533 (-)
XLOC_002924 ovca2 coding downstream 548655 35664129 ~ 35668584 (-)
XLOC_002930 or109-6 coding upstream 1444 36221505 ~ 36223005 (-)
XLOC_002931 or109-5 coding upstream 4409 36224470 ~ 36225729 (-)
XLOC_002932 or109-4 coding upstream 10541 36230602 ~ 36231741 (-)
XLOC_002933 or109-3 coding upstream 14924 36234985 ~ 36236610 (-)
XLOC_002934 or109-2 coding upstream 17920 36237981 ~ 36240806 (-)
XLOC_002923 NA non-coding downstream 562559 35650584 ~ 35654680 (-)
XLOC_002922 BX663516.3 non-coding downstream 596790 35620333 ~ 35620449 (-)
XLOC_002919 NA non-coding downstream 785584 35429504 ~ 35431655 (-)
XLOC_002939 NA non-coding upstream 245282 36465343 ~ 36469895 (-)
XLOC_002942 NA non-coding upstream 375319 36595380 ~ 36610901 (-)
XLOC_002944 NA non-coding upstream 422105 36642166 ~ 36650904 (-)
XLOC_002945 AL845435.1 non-coding upstream 434136 36654197 ~ 36662611 (-)
XLOC_002955 BX323076.2 non-coding upstream 821017 37041078 ~ 37042232 (-)

Expression


Co-expression Network