LOC110538431


Basic Information

Item Value
gene id LOC110538431
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 73756257 ~ 73758332 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021625261.2
CGGATCATTACTGATATCCGATGTGAGACTAAAAAGATACTACAGACCTGAGGCACTTATACATACAGCTGAGAAAATGAACCCAGGGAAACATTTTAACGACAACTGAGGAGTAACAACACCCTTAACAAAGCTTGAAGACAAACAGGCATAGGAAGGGGCACTGGGCGATTCTCACGAGATTTCAAGTCGATAGTCTCTCTGAAGAGATAAATAAATAATCTCTCTATATAGCCTCTGTCCTCAGGTCAGGATGAGGGCCACACTACTCTGCCTGCTGTGTATGGCCATGTGTTTAACAGGGATCCCAGCCAGCCCCGTCCGGAAGGCCCAGAAGAACAACCAGGCTGCCCCCATTAATGACATGAACGTGCTGATGTACGGCGTGCTGCAGTTCAGCGAGACCCTGCACCACGTCTACGAGAGCACCGATGCCAAGTTTGCTCGGATCGAGAGGTCGCTGAGGAGACAtgaggagaggctggagaggcTGGGCCAGGAGGCAGGCCAGGCCGCAGAGAAGGACAGACAGATGAGACAGGTGCTAGGACAGATACAGGGCCAGATGGCTGGGCTGCAGTCAAAGGCTGAGGAGGCCAAAGGCAAGGTTGCCCGGGTGGAGCAGGAAGAGGGAGAGCTTAGGACCAAGGTGATCAACCTGGAGACATACCTTCAGAACTACCCCCCCAACGGCATACAGGAATTAAAGGATAGGGCGTTTAAACACTCCAGTGTTCTGGAGGGCCTGCTAACATGGACACAGTTCCAAAAACAGAACATTGAGAGTCAGAACCAACAGTTGACCAAGCTACAGAAACTGAGTGAAGCCAGGAGACAGCCAGTCCTTAGTCACATCACCTGATGGTTCCACTGAATCTCAACACCAGCTACTGTAGCTACTGAAACTACACTCCATGACTTTACCCTGGTGCTTAAGTACCCTGTCTACTCATACAAGCATAATTCACACAGAACAAATACTCCCACCCAATAAACTGAATTACAATAACATTACATATTTATGCCACTGTATTATACTTCTGAATACTTTTAATTGTGTTTAACACATGCCCTTTTTTATATGTACATGTTCTTTATTTTAATTCTAATTCATTCTTACTGCTGTCATTTTGTATATTTTGTGTGCAAATAAAAATCTGAAAATATAA

Function

NR:

description
uncharacterized protein LOC110538431

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021625261.2 True 1169 mRNA 0.46 4 73756257 73758332

Neighbor

gene id symbol gene type direction distance location
LOC118937735 LOC106601065 coding upstream 60937 73694424 ~ 73695320 (+)
LOC110538433 LOC106601065 coding upstream 68756 73686626 ~ 73687501 (+)
LOC118937734 LOC106601065 coding upstream 76544 73678826 ~ 73679713 (+)
LOC100136590 LOC100136590 coding upstream 91350 73664084 ~ 73664907 (+)
LOC110538972 NA coding upstream 96883 73658628 ~ 73659374 (+)
LOC110538429 LOC106607222 coding downstream 29127 73787459 ~ 73807192 (+)
LOC118937737 NA coding downstream 118344 73876676 ~ 73878177 (+)
LOC110538423 LOC106601285 coding downstream 246352 74004684 ~ 74034637 (+)
LOC110539171 NA coding downstream 280240 74038572 ~ 74039852 (+)
LOC110538418 LOC100380772 coding downstream 284286 74042618 ~ 74060671 (+)
G1109729 NA non-coding upstream 8730 73747259 ~ 73747527 (+)
G1109728 NA non-coding upstream 9160 73746531 ~ 73747097 (+)
G1109727 LOC106601059 non-coding upstream 10267 73745768 ~ 73745990 (+)
G1109726 LOC106601059 non-coding upstream 11163 73744835 ~ 73745094 (+)
G1109724 NA non-coding upstream 15000 73740857 ~ 73741257 (+)
G1109707 NA non-coding downstream 57443 73815775 ~ 73818607 (+)
G1109762 NA non-coding downstream 60430 73818762 ~ 73819092 (+)
G1109781 NA non-coding downstream 81622 73839954 ~ 73840153 (+)
G1109782 NA non-coding downstream 82016 73840348 ~ 73841173 (+)
G1109783 NA non-coding downstream 82848 73841180 ~ 73841478 (+)
LOC110538462 rpc11 other upstream 370390 73384755 ~ 73386199 (+)
G1109505 NA other upstream 450103 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 1737967 72016045 ~ 72019145 (+)
psmg3 psmg3 other upstream 1813458 71941515 ~ 71942804 (+)
G1105655 NA other upstream 2849828 70902905 ~ 70906429 (+)
G1109778 NA other downstream 75311 73833643 ~ 73834606 (+)
G1109786 NA other downstream 87923 73846255 ~ 73846794 (+)
G1111126 LOC106578813 other downstream 1201934 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 1660457 75418789 ~ 75423163 (+)
G1111961 NA other downstream 1986807 75745139 ~ 75745620 (+)

Expression


Co-expression Network