Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110538422 |
| gene name | LOC106601282 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 74068285 ~ 74079316 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: suppressor of SWI4 1 homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110538422 | False | 3905 | mRNA | 0.45 | 13 | 74071337 | 74079316 |
| TU1262718 | True | 1273 | TUCP | 0.49 | 11 | 74068285 | 74079277 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538420 | LOC106601184 | coding | downstream | 3239 | 74065558 ~ 74068098 (-) |
| LOC110538421 | LOC106607209 | coding | downstream | 5898 | 74060992 ~ 74065439 (-) |
| LOC110538971 | NA | coding | downstream | 111984 | 73948838 ~ 73959353 (-) |
| LOC118937739 | LOC106607214 | coding | downstream | 125703 | 73939344 ~ 73945634 (-) |
| LOC118937738 | LOC106607216 | coding | downstream | 132139 | 73935811 ~ 73939198 (-) |
| olfm2a | LOC106601278 | coding | upstream | 107897 | 74187213 ~ 74285404 (-) |
| LOC110538970 | LOC106607203 | coding | upstream | 225204 | 74304520 ~ 74394107 (-) |
| LOC110538409 | myst2 | coding | upstream | 486042 | 74565358 ~ 74577263 (-) |
| LOC118937742 | LOC106601296 | coding | upstream | 501585 | 74580901 ~ 74584090 (-) |
| LOC110538408 | LOC100194731 | coding | upstream | 509133 | 74588449 ~ 74591846 (-) |
| G1110603 | NA | non-coding | downstream | 27778 | 74042563 ~ 74043559 (-) |
| G1110590 | NA | non-coding | downstream | 45491 | 74022487 ~ 74025846 (-) |
| G1110573 | NA | non-coding | downstream | 72812 | 73998288 ~ 73998525 (-) |
| G1110572 | NA | non-coding | downstream | 76981 | 73994140 ~ 73994356 (-) |
| G1110568 | NA | non-coding | downstream | 82819 | 73988262 ~ 73988518 (-) |
| G1110633 | NA | non-coding | upstream | 14053 | 74093369 ~ 74093587 (-) |
| G1110652 | LOC106601280 | non-coding | upstream | 39013 | 74118329 ~ 74120164 (-) |
| G1110656 | LOC106601280 | non-coding | upstream | 53793 | 74133109 ~ 74133641 (-) |
| G1110665 | NA | non-coding | upstream | 61158 | 74140474 ~ 74140699 (-) |
| G1110670 | NA | non-coding | upstream | 69578 | 74148894 ~ 74149120 (-) |
| G1110374 | NA | other | downstream | 457069 | 73612577 ~ 73614268 (-) |
| G1110369 | hbb1 | other | downstream | 475979 | 73582194 ~ 73595358 (-) |
| LOC110538455 | LOC106601085 | other | downstream | 601728 | 73462257 ~ 73510350 (-) |
| G1109389 | LOC106601099 | other | downstream | 989935 | 73072892 ~ 73081402 (-) |
| G1109275 | NA | other | downstream | 1146086 | 72924157 ~ 72925251 (-) |
| G1110701 | NA | other | upstream | 124905 | 74204221 ~ 74205191 (-) |
| G1110941 | NA | other | upstream | 570967 | 74650283 ~ 74650763 (-) |
| G1111424 | LOC106601260 | other | upstream | 738659 | 74817975 ~ 74824590 (-) |
| G1111451 | NA | other | upstream | 801182 | 74880498 ~ 74880807 (-) |
| G1111672 | NA | other | upstream | 1110869 | 75190185 ~ 75190431 (-) |
