LOC118937741


Basic Information

Item Value
gene id LOC118937741
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 74563904 ~ 74567209 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036938405.1
GGCGGAGCAAAACATTGGAATATAAACTGACCACAGCGTTACCGATTGACAGGCACACGAAAGAGACCACACTATAACGCCTGTTACAACTTTGGCTTTGCTTAATAGATATCTGTTTGTTTCATACAGAAGAAACACCTGCAGCCTATCATCTATTCCCCCAAATTTACCGACATGGACGTTTTAAAGTTTGTGGTTTTGATAGTTGCAGTTTTTGCGCAGGTTTACTGTGCCCTGGGAACCCCAACCAGCGACGATGGAGATATTTGGTCGATTGAAAACTGGCAGAGGGATCCGTTGGAGAGTGGCTTGGCCTTCCGCGTGGCTGACCTCACCAAGAGGTCCGAACTGCAGCAGTTTCAACAACTCGTGGCGCAAAGCTCAGGGAATAAAGCAGACATGTTTATTGGACTCATGGGTCGAAGGTCCTCAAGTCGAGAGTCACAAGAGGAATGGAACAAGCCCCAGTATTACTAGAGATGAAGATATGAACTTGATTGTTCAAAGTCACTGTAATAATCAATGTTGCTCAAATTATTAATCTAGGTCAAAGCAATCCAATACATGCAACAAAGTTTAATTTATGTAACATAAGTAAGGAATGTGTAATGAGGGTCAATAATTATTTGACTCATGTGTTTAAAAACTGGGTCGGGGATTTGCTGCAACTAATTGACATTGTATGCCTTCCTTAATTGTATCATTCTGTACTCTCCTTTGCAATACAAGCTGCTTGTCATGTTCAATcaagtattttgttgttgttgcataatATTAGATGGCTTGTTATGCATATAAACAGGTAAATTTGTCTAACTTAAGATAATTCACGTGTCATCACTGAGAGCATTACTGAACTTCAAGATTCATTAATAGTGGAAAAAACAATTTGCTTTTCTGTGCTTCATATGAAATGCTGATAATTTGTCAGTGAACCCCTACACATACTGCCCCAGAAAGAAAACCTTGCACACAGGATCAAGACATTTTGGAGTTCAGATTTATTGGAGAGGAAGCAAGTACAAAAGCAGGTGCACACAACTTATCTACATATTAATGCTGTACAGAGGTACTGCTGTGTAGCTACAGTGGTCTACTGCTCTTTTGATAGCTTATTGAAGAACAACTGCTTGTATGAAGGTGAACATTATGACCACGCACACTGGTTTCAGGTAAACCGAGCTGTTCTGGAGTTGCTTTCTATAGCTGCCATGACAGGCACAGGAGGAAGCATCAAGACAACACAGACCACAGCAACATGTTGGGAGGCAAAATATGAAAGGCAGAGGTAAAGGAAGATAATTGTTTGTGGGAAATTAACAGTTGACCTGTTGTAGCAGTGTTCTCAGGTTCCAATAAAATATACAGTGAAATGAGCTGCAAGTTGACCTGCTATAATACCTCTGTGTGATGTTAGGCCAAGTTAGCATCTATTCATGCCAAAGATGCTGATATTATAGACTCTTTGAAGAACCATGAACTTTGCAACTAAATCATACCACAAAATATAGTGGACAGTGTACAATCTAGTTTTAGAGAGTCAAAATAAGGAAGTAAACAATCTGATGGGCAGGTATATTTCAAGGCCTTTCACTTAACATTCAAAAGCAGAAGGAATGAATGAAGCTTGACTGGCCCAAAACTATTTTAACATGCAATTTAAATTGGAAATCCAAAAGTTCAACACGAGTGCTTATATTCTGAAAATAATCATAAATGCCATATTATTGGAGAATTACTTTCTTAATTCAAACCTGGATCCAGTGAAATATACAGTCTATTTGGCAGCCTTGAAGAAATACCTCCTCTCAGATTGAGCTTGTTTTGTTACTCCCCCATGACATACAAATGCACAGATCAAAtagcttattttttttaaatacacaagaaaaacaaaaacaacccaGAAACACAACTGAATAAAAACTCTACACAAGGATTAACACGGTTTCAGAATGACAGGGAAGTTTGTGAATCCTTTACGATGTTAATAAAGAGTTCACTTTGACATATGGTCAGTAAAGGCCATTTCTTCTGCAACTATAAAGATGTGCACTTTATATATTTATTGCCCTATTGTGGCTAGAAATTCTTGAGATGAGGGCCATACGTTGCTGTGGAAACTCAAAatctttatatacacacacacacagcagatggaGGTAATTTCTGGTTTCATCCAATGTATATGCACAATCAGTCTAGCAGTCAGTAacatttgcagcaattcaaaatGTTGGTGAAAAAAAATCCATTATTTTATCCTTATACACATAAACGGACATAAAATGGGTTGACCACAATGCAAAACAAATAGTCTCTATTGTTGGGTACTACATGCATTGTTCCTCTGCAACATGTTCGAGAAAATCTCTTCTAATGACACGTTCAAATCTAGTTCTCAGTACGGCTAGGAAACCAGTCCTGCACATTTTAAAAACTTTCTTCAAATATACTTTGTCTTGCCAAACCTGTACCATAAAATCTTCTATCTATCATTTAAATATATTGACAGCATGACTTGAACTTGACATCAAATTCGTACTTTGGCCTTAGACAAAGCCTGACTGCAAATTCCAGTTCTGTTCTTTTTTCTTCTCTCCCAAAATGTTTACTTGTGCACTCTCCCTCATGGATTTAAAAGGAATGGATTGGGGAAAGGAACTTCCTCCAGCCAACGTTTTCACCAGTCCGAGGCTTTTAAATACTTGAAAGagtgcacactggagagaaggggaagaggcaATCTTTCAGGAAGCCAAATTTAAAATAGCTTAAAAAAGGACATTAGCCAAAACAGCTTAAAACAGTGGTAAAACCAAacagaagtaaaaaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036938405.1 True 2838 mRNA 0.38 4 74563904 74567209

Neighbor

gene id symbol gene type direction distance location
LOC110538412 LOC106607198 coding upstream 12572 74545711 ~ 74551332 (+)
LOC118937740 mfap4 coding upstream 31360 74530032 ~ 74532544 (+)
LOC110538410 LOC103358203 coding upstream 34081 74484158 ~ 74529823 (+)
LOC110538414 LOC106607202 coding upstream 142894 74411740 ~ 74421010 (+)
LOC110538416 LOC106601280 coding upstream 428457 74107487 ~ 74135447 (+)
LOC118937743 NA coding downstream 8677 74575886 ~ 74580542 (+)
LOC110538404 LOC106607191 coding downstream 43713 74610922 ~ 74622960 (+)
LOC110538405 LOC106607193 coding downstream 56099 74623308 ~ 74632677 (+)
LOC110538406 LOC106607190 coding downstream 70015 74637224 ~ 74639489 (+)
LOC110538402 LOC106601265 coding downstream 163325 74730534 ~ 74761760 (+)
G1110154 NA non-coding upstream 28888 74534589 ~ 74535016 (+)
G1110146 NA non-coding upstream 65107 74495060 ~ 74498797 (+)
G1110083 NA non-coding upstream 184636 74378980 ~ 74379268 (+)
G1110045 NA non-coding upstream 257167 74304545 ~ 74306737 (+)
G1109950 NA non-coding upstream 459819 74103515 ~ 74104085 (+)
G1110175 NA non-coding downstream 11970 74579179 ~ 74579609 (+)
G1110195 LOC106607192 non-coding downstream 37914 74605123 ~ 74607679 (+)
G1110204 NA non-coding downstream 72828 74640037 ~ 74640264 (+)
G1110205 NA non-coding downstream 73234 74640443 ~ 74640729 (+)
G1110215 NA non-coding downstream 91847 74659056 ~ 74659390 (+)
G1109786 NA other upstream 717110 73846255 ~ 73846794 (+)
G1109778 NA other upstream 729298 73833643 ~ 73834606 (+)
LOC110538462 rpc11 other upstream 1178037 73384755 ~ 73386199 (+)
G1109505 NA other upstream 1257750 73305425 ~ 73306154 (+)
LOC110538241 LOC106607115 other upstream 2545614 72016045 ~ 72019145 (+)
G1111126 LOC106578813 other downstream 393057 74960266 ~ 75048356 (+)
G1111805 LOC105030512 other downstream 851580 75418789 ~ 75423163 (+)
G1111961 NA other downstream 1177930 75745139 ~ 75745620 (+)
G1111970 LOC106601177 other downstream 1183661 75750870 ~ 75753593 (+)
LOC110538360 LOC104946491 other downstream 1217141 75774976 ~ 75790602 (+)

Expression


Co-expression Network