Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110538398 |
| gene name | LOC106607185 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 74776771 ~ 74784585 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| von Willebrand factor C domain-containing protein 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021625191.2 | True | 2290 | mRNA | 0.46 | 3 | 74776771 | 74784585 |
74,768,000
74,769,000
74,770,000
74,771,000
74,772,000
74,773,000
74,774,000
74,775,000
74,776,000
74,777,000
74,778,000
74,779,000
74,780,000
74,781,000
74,782,000
74,783,000
74,784,000
74,785,000
74,786,000
74,787,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538400 | NA | coding | upstream | 246 | 74770005 ~ 74776525 (+) |
| LOC110538402 | LOC106601265 | coding | upstream | 15011 | 74730534 ~ 74761760 (+) |
| LOC110538406 | LOC106607190 | coding | upstream | 137282 | 74637224 ~ 74639489 (+) |
| LOC110538405 | LOC106607193 | coding | upstream | 144094 | 74623308 ~ 74632677 (+) |
| LOC110538404 | LOC106607191 | coding | upstream | 153811 | 74610922 ~ 74622960 (+) |
| LOC110538397 | LOC106607181 | coding | downstream | 7828 | 74792413 ~ 74831994 (+) |
| LOC110538393 | LOC106601259 | coding | downstream | 146277 | 74930862 ~ 74933801 (+) |
| LOC110538391 | LOC106601294 | coding | downstream | 156734 | 74941319 ~ 74942346 (+) |
| LOC110538388 | LOC106601254 | coding | downstream | 175452 | 74960037 ~ 75102995 (+) |
| LOC110538390 | LOC106578813 | coding | downstream | 253757 | 75038342 ~ 75048707 (+) |
| G1110993 | NA | non-coding | upstream | 9877 | 74765517 ~ 74766894 (+) |
| G1111002 | LOC106604990 | non-coding | upstream | 51070 | 74725298 ~ 74725701 (+) |
| G1111001 | NA | non-coding | upstream | 52869 | 74723602 ~ 74723902 (+) |
| G1110998 | NA | non-coding | upstream | 57499 | 74718989 ~ 74719272 (+) |
| G1110984 | NA | non-coding | upstream | 78146 | 74692663 ~ 74698625 (+) |
| G1110987 | rpl23 | non-coding | downstream | 230 | 74784815 ~ 74786587 (+) |
| G1110989 | NA | non-coding | downstream | 47554 | 74832139 ~ 74836922 (+) |
| G1111035 | NA | non-coding | downstream | 54118 | 74838703 ~ 74840368 (+) |
| G1111036 | NA | non-coding | downstream | 56707 | 74841292 ~ 74841617 (+) |
| G1111037 | LOC106601258 | non-coding | downstream | 57213 | 74841798 ~ 74842395 (+) |
| G1109786 | NA | other | upstream | 929977 | 73846255 ~ 73846794 (+) |
| G1109778 | NA | other | upstream | 942165 | 73833643 ~ 73834606 (+) |
| LOC110538462 | rpc11 | other | upstream | 1390904 | 73384755 ~ 73386199 (+) |
| G1109505 | NA | other | upstream | 1470617 | 73305425 ~ 73306154 (+) |
| LOC110538241 | LOC106607115 | other | upstream | 2758481 | 72016045 ~ 72019145 (+) |
| G1111126 | LOC106578813 | other | downstream | 175681 | 74960266 ~ 75048356 (+) |
| G1111805 | LOC105030512 | other | downstream | 634204 | 75418789 ~ 75423163 (+) |
| G1111961 | NA | other | downstream | 960554 | 75745139 ~ 75745620 (+) |
| G1111970 | LOC106601177 | other | downstream | 966285 | 75750870 ~ 75753593 (+) |
| LOC110538360 | LOC104946491 | other | downstream | 999765 | 75774976 ~ 75790602 (+) |
