Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110538966 |
| gene name | LOC106607166 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 75537554 ~ 75552963 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: chondroadherin-like protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110538966 | True | 1283 | mRNA | 0.57 | 6 | 75537554 | 75552963 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rbx1 | rbx1 | coding | downstream | 188 | 75534272 ~ 75537366 (-) |
| LOC110538376 | xpp3 | coding | downstream | 26677 | 75501592 ~ 75510877 (-) |
| LOC110538375 | LOC106607167 | coding | downstream | 36308 | 75465087 ~ 75501246 (-) |
| desi1a | LOC106601247 | coding | downstream | 102905 | 75431549 ~ 75434649 (-) |
| LOC110538381 | LOC106601248 | coding | downstream | 171292 | 75288118 ~ 75366262 (-) |
| LOC110538374 | LOC106607164 | coding | upstream | 2570 | 75555533 ~ 75561122 (-) |
| LOC110538370 | LOC106601240 | coding | upstream | 78092 | 75631055 ~ 75637902 (-) |
| LOC110538367 | LOC106601236 | coding | upstream | 111126 | 75664089 ~ 75677539 (-) |
| LOC110539170 | plbl1 | coding | upstream | 156465 | 75709428 ~ 75713862 (-) |
| trnar-ccu-46 | NA | coding | upstream | 162562 | 75715525 ~ 75715597 (-) |
| G1112563 | NA | non-coding | downstream | 7450 | 75529817 ~ 75530104 (-) |
| G1112562 | NA | non-coding | downstream | 7883 | 75529361 ~ 75529671 (-) |
| G1112553 | NA | non-coding | downstream | 46531 | 75487945 ~ 75491023 (-) |
| G1112517 | NA | non-coding | downstream | 109483 | 75409453 ~ 75428071 (-) |
| G1112587 | NA | non-coding | upstream | 32420 | 75585383 ~ 75585746 (-) |
| G1112590 | NA | non-coding | upstream | 38419 | 75591382 ~ 75591600 (-) |
| G1112596 | NA | non-coding | upstream | 65708 | 75618671 ~ 75618940 (-) |
| G1112577 | LOC106607162 | non-coding | upstream | 67366 | 75620329 ~ 75621351 (-) |
| G1112600 | NA | non-coding | upstream | 83097 | 75636060 ~ 75636286 (-) |
| G1111672 | NA | other | downstream | 347123 | 75190185 ~ 75190431 (-) |
| G1111451 | NA | other | downstream | 656747 | 74880498 ~ 74880807 (-) |
| G1111424 | LOC106601260 | other | downstream | 712964 | 74817975 ~ 74824590 (-) |
| G1110941 | NA | other | downstream | 886791 | 74650283 ~ 74650763 (-) |
| G1110701 | NA | other | downstream | 1332363 | 74204221 ~ 74205191 (-) |
| G1112697 | LOC106607147 | other | upstream | 243487 | 75796450 ~ 75796798 (-) |
| G1112997 | NA | other | upstream | 827965 | 76380928 ~ 76381727 (-) |
| G1113013 | NA | other | upstream | 859977 | 76412940 ~ 76414211 (-) |
| LOC110538323 | NA | other | upstream | 875585 | 76428548 ~ 76478939 (-) |
| G1113043 | LOC106601201 | other | upstream | 931409 | 76484372 ~ 76485285 (-) |
