LOC110538632 (cd2b2)


Basic Information

Item Value
gene id LOC110538632
gene name cd2b2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 82065478 ~ 82068444 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021625571.2
GAATGGCGCTTGCAGACTTTTCGTATCGATAGCTAGTAGCTAGCGAGGTAGTTTTTGTTTTCCTTAGCTATCTGCATTTAGATACATGTTGTATTTTTGGTATTTTTAATTATCCTTATCCATACTCAGATGCACGCAAAGTGTTGTGAAGCTAGCTAACTTACGTCCCTTTAACGTTACTTACTAACTCTGCATGTGTCGTTATTTTCTTGGTACCTGCTAGTATCTTAACGTTAGTCAGctagcaaaacaaaacaaatttagctagctatagctgTAGTAGTCACACTATTGTGGAGATAATCGTATCACAATGTCAAAAAGAAAAGTCACGTTTGGGGACGGCGATGGTGGAGAGTTGTTGGATGAGGACGTTCCAAAGAAAAAGTTATGTGAGGACGTGGTTGGGCCGGGCTCCAGGTTCAAGGGGAAACATTCTCTGGACAGtgacgaggaggacgaggaagaAGATGGAGATAAGAGCAGCAAATACAACATATTGGCCAGTGACGATGTGGAAGGTCAGGAGGGGGCAACAATTGACTGTGACGAGGGAGTTCCCATCACACCCTTTAACCTGGATGAGGAGATGCAAGAAGGGCACTTTGACTCTGAAGGAAACTACTACGTCAAAAAGGATGAGGAGATCAGGGACAACTGGCTTGACAACATTGACTGGGTGAAAATAAGAGAGCAACCTACTAAACGAAAGAAGAAAGGTCTGGCagccaagaggaggaggagagtgggggaTGAAGATGAGGCAGAAGAAGAGAAACAGCGAGAGGAGAAGCAGGCAGATAGTGACGAAGAGGAAGACATGGAAGAGGAAAAGGAGCCAGTTGAAGACCCCCTGGCATCCTTCAGCCAGCATCAGCTCACAGAGGCTGTGTTGGAGCTGCTATTACCTGGGGAGACTGTTGCCACAGGGCTTCGCCGGCTTGGAGGCCTAGGTGGGCGTAAGAAGGGAAAGCAGAGAGAAGAGAACGGAAAAGCAGAAGAAACAAATAGGGATACCGAAAAACTGGACAGGCTCACGGCACTTGCAGACAGACTGGTTGGGAGTGGAGTGTTTGAAATATACCAGCAGACATATGAAAAGCTGGCCTACACACTGAAAGGGAAGAGCCAGCAGCAATCGGTGGGGAGGAGTTTAAatggggaggaggaagaagatgagCTTGACATGTTTGCTGACAAAATTGACGAGAAGCACAGTGTCAAAGCTCCGGACAAAGAGGATCAGGATGATGAGACAGTGAGTGATCAGGTGATGTGGGAGTATAAATGGGACACAGAGGAGAATTCTGAACTCTACGGCCCCTTCAGCAGTCAGCAGATGCAGGGCTGGGTGGATGAGGGCTATTTCAAAGATGGTGTTTACTGCAGGAGGATTGAACAGGGAAGCGCTCAGTTCTACAATTCCAAGAGACTAGACTTTGATCTTTACACATGACCATGATCAGTTATTGACTAATAATTTGATGTATTATGctgtttcatgtggaccccaggaagagtagctgctgtgtTTGCAGTGGCTAATGGGGACCCTAATAAATACCAATGATAGTCTCTcgctcacacccacacacacatccacattcTCTGTTATCTGATCTCTTATTGTATGTAGCCTTCCTGTTTTAAAATAAACAAATTGGTATTTTA
>XM_021625570.2
AGAGAACTTTTTGAGACCGTGACACCTCTTGAACATGCCGCAGAACTGTACGCATCAAGTTCGACATCACTTCCTGTTTAGTTGAATGGCGCTTGCAGACTTTTCGTATCGATAGCTAGTAGCTAGCGAGAATGTCAAAAAGAAAAGTCACGTTTGGGGACGGCGATGGTGGAGAGTTGTTGGATGAGGACGTTCCAAAGAAAAAGTTATGTGAGGACGTGGTTGGGCCGGGCTCCAGGTTCAAGGGGAAACATTCTCTGGACAGtgacgaggaggacgaggaagaAGATGGAGATAAGAGCAGCAAATACAACATATTGGCCAGTGACGATGTGGAAGGTCAGGAGGGGGCAACAATTGACTGTGACGAGGGAGTTCCCATCACACCCTTTAACCTGGATGAGGAGATGCAAGAAGGGCACTTTGACTCTGAAGGAAACTACTACGTCAAAAAGGATGAGGAGATCAGGGACAACTGGCTTGACAACATTGACTGGGTGAAAATAAGAGAGCAACCTACTAAACGAAAGAAGAAAGGTCTGGCagccaagaggaggaggagagtgggggaTGAAGATGAGGCAGAAGAAGAGAAACAGCGAGAGGAGAAGCAGGCAGATAGTGACGAAGAGGAAGACATGGAAGAGGAAAAGGAGCCAGTTGAAGACCCCCTGGCATCCTTCAGCCAGCATCAGCTCACAGAGGCTGTGTTGGAGCTGCTATTACCTGGGGAGACTGTTGCCACAGGGCTTCGCCGGCTTGGAGGCCTAGGTGGGCGTAAGAAGGGAAAGCAGAGAGAAGAGAACGGAAAAGCAGAAGAAACAAATAGGGATACCGAAAAACTGGACAGGCTCACGGCACTTGCAGACAGACTGGTTGGGAGTGGAGTGTTTGAAATATACCAGCAGACATATGAAAAGCTGGCCTACACACTGAAAGGGAAGAGCCAGCAGCAATCGGTGGGGAGGAGTTTAAatggggaggaggaagaagatgagCTTGACATGTTTGCTGACAAAATTGACGAGAAGCACAGTGTCAAAGCTCCGGACAAAGAGGATCAGGATGATGAGACAGTGAGTGATCAGGTGATGTGGGAGTATAAATGGGACACAGAGGAGAATTCTGAACTCTACGGCCCCTTCAGCAGTCAGCAGATGCAGGGCTGGGTGGATGAGGGCTATTTCAAAGATGGTGTTTACTGCAGGAGGATTGAACAGGGAAGCGCTCAGTTCTACAATTCCAAGAGACTAGACTTTGATCTTTACACATGACCATGATCAGTTATTGACTAATAATTTGATGTATTATGctgtttcatgtggaccccaggaagagtagctgctgtgtTTGCAGTGGCTAATGGGGACCCTAATAAATACCAATGATAGTCTCTcgctcacacccacacacacatccacattcTCTGTTATCTGATCTCTTATTGTATGTAGCCTTCCTGTTTTAAAATAAACAAATTGGTATTTTA

Function

NR:

description
CD2 antigen cytoplasmic tail-binding protein 2-like

GO: NA

KEGG:

id description
K13099 CD2BP2, PPP1R59; CD2 antigen cytoplasmic tail-binding protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021625571.2 False 1671 mRNA 0.46 7 82065478 82068361
XM_021625570.2 True 1489 mRNA 0.48 7 82065478 82068444

Neighbor

gene id symbol gene type direction distance location
LOC110538631 LOC106601590 coding downstream 379 82052083 ~ 82065099 (-)
LOC110538626 LOC106606893 coding downstream 57888 82000899 ~ 82007590 (-)
elob elob coding downstream 65719 81995871 ~ 81999759 (-)
LOC110538627 LOC106606891 coding downstream 70835 81992128 ~ 81994643 (-)
LOC110538625 armc5 coding downstream 74855 81980619 ~ 81990623 (-)
LOC110538635 LOC106601593 coding upstream 15764 82084208 ~ 82099839 (-)
LOC110538636 hsd3b7 coding upstream 53323 82121767 ~ 82133545 (-)
LOC110538637 LOC106601535 coding upstream 72896 82141340 ~ 82155882 (-)
LOC110538638 ccdc47 coding upstream 89858 82158302 ~ 82162913 (-)
LOC118936242 LOC106601567 coding upstream 103488 82171932 ~ 82212240 (-)
G1119734 NA non-coding downstream 85190 81979610 ~ 81980288 (-)
G1119852 NA non-coding downstream 94625 81970561 ~ 81970853 (-)
G1119836 NA non-coding downstream 131842 81932704 ~ 81933636 (-)
G1119760 prf1 non-coding downstream 137060 81924616 ~ 81928418 (-)
G1119731 NA non-coding downstream 195803 81867967 ~ 81869675 (-)
G1119885 NA non-coding upstream 42854 82111298 ~ 82111667 (-)
G1119890 NA non-coding upstream 61052 82129496 ~ 82132724 (-)
LOC110538640 LOC106585555 non-coding upstream 101936 82170380 ~ 82228178 (-)
G1119919 NA non-coding upstream 162116 82230560 ~ 82230830 (-)
LOC110538641 map3k3 non-coding upstream 166337 82234780 ~ 82254841 (-)
G1119715 NA other downstream 387059 81677602 ~ 81678419 (-)
G1119621 NA other downstream 617956 81446794 ~ 81447522 (-)
G1117879 NA other downstream 1191264 80870775 ~ 80874214 (-)
LOC110538585 LOC106601460 other downstream 1289617 80771698 ~ 80786963 (-)
G1117808 NA other downstream 1317422 80747579 ~ 80748056 (-)
LOC110538642 LOC106601611 other upstream 187671 82256115 ~ 82276873 (-)
LOC110539000 LOC106606868 other upstream 704732 82771312 ~ 82775046 (-)
G1120687 NA other upstream 1654101 83722545 ~ 83724090 (-)
LOC110538701 NA other upstream 2336371 84403982 ~ 84614260 (-)
G1121555 NA other upstream 2481357 84386334 ~ 84799220 (-)

Expression

LOC110538632(cd2b2) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 60.
End of interactive chart.

LOC110538632(cd2b2) Expression in each Bioproject

Bar chart with 21 bars.
LOC110538632(cd2b2) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 750.
End of interactive chart.

Co-expression Network