Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110486093 |
| gene name | LOC106606427 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 92458493 ~ 92486264 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transmembrane protein 235-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036939193.1 | False | 1915 | mRNA | 0.45 | 4 | 92458493 | 92486264 |
| TU1282393 | False | 1107 | lncRNA | 0.43 | 1 | 92458497 | 92459603 |
| TU1282394 | False | 642 | lncRNA | 0.38 | 1 | 92458497 | 92459138 |
| TU1282395 | True | 361 | TUCP | 0.47 | 2 | 92484227 | 92486006 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513965 | lg3bp | coding | downstream | 370979 | 92081486 ~ 92087514 (-) |
| LOC118936479 | LOC106595712 | coding | downstream | 383864 | 92070327 ~ 92074629 (-) |
| LOC118937779 | LOC106606432 | coding | downstream | 408792 | 92045168 ~ 92049701 (-) |
| LOC110487071 | LOC106595712 | coding | downstream | 422514 | 92031632 ~ 92035979 (-) |
| LOC118937778 | LOC106606432 | coding | downstream | 447972 | 92005828 ~ 92010521 (-) |
| LOC110486090 | LOC105012845 | coding | upstream | 17442 | 92503706 ~ 92526039 (-) |
| LOC110516409 | LOC106594801 | coding | upstream | 112616 | 92598880 ~ 92802145 (-) |
| LOC110487086 | LOC106601910 | coding | upstream | 387395 | 92873659 ~ 92877180 (-) |
| LOC118937833 | otop2 | coding | upstream | 462311 | 92948575 ~ 92952718 (-) |
| LOC110487082 | otop2 | coding | upstream | 475405 | 92961669 ~ 92992081 (-) |
| G1127470 | NA | non-coding | downstream | 19363 | 92438917 ~ 92439130 (-) |
| G1127469 | NA | non-coding | downstream | 21132 | 92437094 ~ 92437361 (-) |
| G1127467 | NA | non-coding | downstream | 23103 | 92435048 ~ 92435390 (-) |
| G1127461 | NA | non-coding | downstream | 24953 | 92433338 ~ 92433540 (-) |
| G1127452 | NA | non-coding | downstream | 29416 | 92428741 ~ 92429077 (-) |
| G1127570 | LOC108437148 | non-coding | upstream | 30201 | 92516465 ~ 92553024 (-) |
| G1127599 | NA | non-coding | upstream | 87295 | 92573559 ~ 92573823 (-) |
| G1127601 | NA | non-coding | upstream | 93865 | 92580129 ~ 92580517 (-) |
| G1127603 | NA | non-coding | upstream | 104376 | 92590640 ~ 92592551 (-) |
| G1127606 | NA | non-coding | upstream | 107851 | 92594115 ~ 92594929 (-) |
| G1127417 | NA | other | downstream | 96875 | 92360002 ~ 92361618 (-) |
| G1126380 | NA | other | downstream | 1426667 | 91030856 ~ 91031826 (-) |
| G1126362 | NA | other | downstream | 1445991 | 91012135 ~ 91012502 (-) |
| G1126256 | NA | other | downstream | 1698372 | 90758010 ~ 90760121 (-) |
| G1127726 | NA | other | upstream | 230065 | 92715049 ~ 92718467 (-) |
| G1127735 | NA | other | upstream | 261530 | 92747794 ~ 92748215 (-) |
| G1127739 | NA | other | upstream | 268615 | 92754879 ~ 92755132 (-) |
| G1127507 | NA | non-coding | upstream | 340 | 92459943 ~ 92460220 (-) |
| G1127515 | NA | non-coding | upstream | 14338 | 92473941 ~ 92474175 (-) |
| G1127517 | NA | non-coding | upstream | 19789 | 92479392 ~ 92479713 (-) |
| G1127518 | NA | non-coding | upstream | 21708 | 92481311 ~ 92481558 (-) |
| LOC110486093 | LOC106606427 | other | upstream | 24624 | 92458493 ~ 92486264 (-) |
