Item | Value |
---|---|
gene id | LOC110487082 |
gene name | otop2 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048576.1 |
NCBI id | CM023230.2 |
chromosome length | 102853256 |
location | 92961669 ~ 92992081 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
otop2 | Predicted to enable proton channel activity. Predicted to be involved in proton transmembrane transport. Predicted to act upstream of or within ion transport. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human OTOP2 (otopetrin 2). |
description |
---|
otopetrin-2-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036939212.1 | False | 2082 | mRNA | 0.51 | 7 | 92961669 | 92968169 |
XM_036939209.1 | False | 2301 | mRNA | 0.51 | 8 | 92961669 | 92992074 |
XM_036939208.1 | False | 2287 | mRNA | 0.51 | 8 | 92961669 | 92992081 |
XM_036939211.1 | False | 2290 | mRNA | 0.51 | 8 | 92961670 | 92992072 |
XM_036939210.1 | True | 2209 | mRNA | 0.51 | 7 | 92961670 | 92992078 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118937833 | otop2 | coding | downstream | 8951 | 92948575 ~ 92952718 (-) |
LOC110487086 | LOC106601910 | coding | downstream | 84489 | 92873659 ~ 92877180 (-) |
LOC110516409 | LOC106594801 | coding | downstream | 159524 | 92598880 ~ 92802145 (-) |
LOC110486090 | LOC105012845 | coding | downstream | 435630 | 92503706 ~ 92526039 (-) |
LOC110486093 | LOC106606427 | coding | downstream | 475405 | 92458493 ~ 92486264 (-) |
LOC110487425 | LOC106606392 | coding | upstream | 24082 | 93016163 ~ 93018006 (-) |
LOC110487427 | LOC106606390 | coding | upstream | 51986 | 93044067 ~ 93099141 (-) |
LOC118937781 | LOC106606397 | coding | upstream | 74599 | 93066680 ~ 93074303 (-) |
LOC118937782 | NA | coding | upstream | 89584 | 93081665 ~ 93084620 (-) |
LOC110487468 | LOC106602060 | coding | upstream | 115168 | 93107249 ~ 93140129 (-) |
G1127964 | NA | non-coding | downstream | 19999 | 92940046 ~ 92941670 (-) |
G1127953 | NA | non-coding | downstream | 48526 | 92912706 ~ 92913143 (-) |
G1127820 | NA | non-coding | downstream | 49849 | 92899780 ~ 92911820 (-) |
G1127815 | NA | non-coding | downstream | 63404 | 92898047 ~ 92898265 (-) |
G1127987 | NA | non-coding | upstream | 2113 | 92994194 ~ 92995045 (-) |
G1127991 | NA | non-coding | upstream | 6338 | 92998419 ~ 93005755 (-) |
G1127992 | NA | non-coding | upstream | 8479 | 93000560 ~ 93001801 (-) |
G1127995 | NA | non-coding | upstream | 26033 | 93018114 ~ 93018328 (-) |
G1127999 | NA | non-coding | upstream | 34775 | 93026856 ~ 93028991 (-) |
G1127792 | NA | other | downstream | 107561 | 92850300 ~ 92854108 (-) |
G1127739 | NA | other | downstream | 206537 | 92754879 ~ 92755132 (-) |
G1127735 | NA | other | downstream | 213454 | 92747794 ~ 92748215 (-) |
G1127726 | NA | other | downstream | 243202 | 92715049 ~ 92718467 (-) |
LOC110487457 | LOC106606216 | other | upstream | 398021 | 93381051 ~ 93392268 (-) |
G1128567 | LOC106606382 | other | upstream | 581984 | 93574065 ~ 93577988 (-) |
G1128609 | NA | other | upstream | 697604 | 93689685 ~ 93690320 (-) |
G1128616 | NA | other | upstream | 710914 | 93702995 ~ 93707636 (-) |
p-ras | LOC101485266 | other | upstream | 723117 | 93715163 ~ 93725341 (-) |